Project name: query_structure

Status: done

Started: 2026-03-16 23:27:22
Settings
Chain sequence(s) A: GNDCLGFWSACNPKNDKCCANLVCSSKHKWCKGKL
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:19)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:19)
Show buried residues

Minimal score value
-3.3271
Maximal score value
2.2854
Average score
-1.2533
Total score value
-43.8655

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.5152
2 N A -2.2776
3 D A -2.4622
4 C A -1.2886
5 L A 0.3465
6 G A 0.8965
7 F A 2.2854
8 W A 1.6715
9 S A 0.9061
10 A A -0.4438
11 C A -1.8391
12 N A -3.0646
13 P A -3.1043
14 K A -3.1466
15 N A -3.3271
16 D A -3.3147
17 K A -3.0074
18 C A -0.8925
19 C A -0.3075
20 A A -0.0060
21 N A -1.4742
22 L A -0.6026
23 V A -0.7533
24 C A -2.0068
25 S A -2.0449
26 S A -2.4670
27 K A -2.8427
28 H A -2.6426
29 K A -2.9636
30 W A -1.0586
31 C A 0.0000
32 K A -0.2340
33 G A -0.3354
34 K A -1.1899
35 L A 0.6413
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Laboratory of Theory of Biopolymers 2018