| Chain sequence(s) |
A: CKGKGAPCRKTMYDCCSGSCGRRGKC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:36)
[INFO] Main: Simulation completed successfully. (00:00:37)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.7396 | |
| 2 | K | A | -0.6330 | |
| 3 | G | A | -1.3820 | |
| 4 | K | A | -2.3519 | |
| 5 | G | A | -2.1442 | |
| 6 | A | A | -1.5973 | |
| 7 | P | A | -1.7683 | |
| 8 | C | A | -2.2729 | |
| 9 | R | A | -2.4094 | |
| 10 | K | A | -2.7834 | |
| 11 | T | A | -0.5442 | |
| 12 | M | A | 0.5787 | |
| 13 | Y | A | 1.1327 | |
| 14 | D | A | 0.0000 | |
| 15 | C | A | 0.0000 | |
| 16 | C | A | 0.4409 | |
| 17 | S | A | -0.3580 | |
| 18 | G | A | -0.5605 | |
| 19 | S | A | -1.2640 | |
| 20 | C | A | 0.0000 | |
| 21 | G | A | -2.5816 | |
| 22 | R | A | -3.4118 | |
| 23 | R | A | -3.5844 | |
| 24 | G | A | -3.2759 | |
| 25 | K | A | -3.6237 | |
| 26 | C | A | -2.6657 |