Project name: H-Ferritin-Mms6_All chains

Status: done

Started: 2026-06-08 06:35:55
Settings
Chain sequence(s) A: PSQVRQNYHQDAEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKPDRDDWESGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETYYLSEQVKSIKELGDHVTNLRKMGAPEAGMAEYLFDKHTLG
C: SPSQVRQNYHQDAEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKPDRDDWESGLNAMECALHLEKSVNQSLLELHKLATDDKNDPHLCDFIETYYLSEQVKSIKELGDHVTNLRKMGAPEAGMAEYLFDKHTLG
B: SPSQVRQNYHQDAEAAIINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKPDRDDWESGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETYYLSEQVKSIKELGDHVTNLRKMGAPEAGMAEYLFDKHTLG
E: SPSQVRQNYHQDAEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKPDRDDWESGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETYYLSEQVKSIKELGDHVTNLRKMGAPEAGMAEYLFDKHTLG
D: SPSQVRQNYHQDAEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKPDRDDWESGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETYYLSEQVKSIKELGDHVTNLRKMGAPEAGMAEYLFDKHTLG
G: SPSQVRQNYHQDAEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKPDRDDWESGLNAMECALHLEKKSVNQQSLLELHKLATDKNDPHLCDFIETYYLSEQVKSIKELGDHVTNLRKMGAPEAGMAEYLFDKHTLGH
F: SPSQVRQNYHQDAEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKPDRDDWESGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETYYLSEQVKSIKELGDHVTNLRKMGAPEAGMAEYLFDKHTLGH
H: PSQVRQNYHQDAEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKPDRDDWESGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETYYLSEQVKSIKELGDHVTNLRKMGAPEAGMAEYLFDKHTLG
input PDB
Selected Chain(s) A,B,C,D,E,F,G,H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:57:47)
[INFO]       Main:     Simulation completed successfully.                                          (00:58:24)
Show buried residues

Minimal score value
-3.7717
Maximal score value
2.2194
Average score
-0.9251
Total score value
-1280.3213

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
5 P A -0.5881
6 S A -1.0035
7 Q A -1.3092
8 V A -1.2022
9 R A -1.0784
10 Q A -1.0677
11 N A -1.5042
12 Y A 0.0000
13 H A -1.9780
14 Q A -2.3121
15 D A -2.2996
16 A A 0.0000
17 E A -1.3334
18 A A -0.9838
19 A A 0.0000
20 I A 0.0000
21 N A 0.0487
22 R A -0.3613
23 Q A 0.0000
24 I A 0.0000
25 N A -0.3100
26 L A 0.0962
27 E A 0.0000
28 L A -0.6311
29 Y A -0.2341
30 A A 0.0000
31 S A 0.0000
32 Y A 0.1225
33 V A 0.0000
34 Y A 0.0000
35 L A 0.7135
36 S A -0.4584
37 M A 0.0000
38 S A 0.0000
39 C A -0.3941
40 Y A 0.0000
41 F A 0.0000
42 D A -3.1925
43 R A -3.1060
44 D A -3.3921
45 D A -3.0147
46 V A -2.1821
47 A A -2.1199
48 L A -1.8689
49 K A -2.6588
50 N A -1.9355
51 F A 0.0000
52 A A 0.0000
53 K A -1.9697
54 Y A -0.9480
55 F A 0.0000
56 L A -0.4269
57 H A -1.7307
58 Q A -1.5777
59 S A 0.0000
60 H A -2.4672
61 E A -2.9770
62 E A 0.0000
63 R A -3.1877
64 E A -3.7019
65 H A -2.2901
66 A A 0.0000
67 E A -3.1688
68 K A -2.4401
69 L A 0.0000
70 M A -1.7138
71 K A -2.4287
72 L A 0.0000
73 Q A 0.0000
74 N A -1.6730
75 Q A -1.8212
76 R A 0.0000
77 G A 0.0000
78 G A 0.0000
79 R A -1.0231
80 I A 0.4138
81 F A 2.0610
82 L A 1.3862
83 Q A -1.0350
84 D A -2.3667
85 I A -1.2580
86 K A -2.9107
87 K A -3.2006
88 P A 0.0000
89 D A -3.2974
90 R A -3.2835
91 D A -3.3982
92 D A -2.8912
93 W A 0.0000
94 E A -2.5449
95 S A -1.4663
96 G A 0.0000
97 L A 0.0000
98 N A -1.0784
99 A A 0.0000
100 M A 0.0000
101 E A -1.1464
102 C A -0.7050
103 A A 0.0000
104 L A 0.0000
105 H A -1.3549
106 L A 0.0000
107 E A 0.0000
108 K A -1.0305
109 S A -0.8024
110 V A 0.0000
111 N A 0.0000
112 Q A -1.5362
113 S A -1.2903
114 L A 0.0000
115 L A 0.0000
116 E A -2.4226
117 L A 0.0000
118 H A 0.0000
119 K A -2.6953
120 L A -2.0892
121 A A 0.0000
122 T A -2.1739
123 D A -2.7284
124 K A -2.7437
125 N A -2.3456
126 D A 0.0000
127 P A 0.0000
128 H A 0.0000
129 L A 0.0000
130 C A -0.3684
131 D A -0.1993
132 F A 0.0000
133 I A 0.0000
134 E A 0.0000
135 T A -0.0341
136 Y A 0.1777
137 Y A 0.0000
138 L A 0.0000
139 S A -1.1172
140 E A -2.0350
141 Q A 0.0000
142 V A 0.0000
143 K A -2.5653
144 S A -1.7410
145 I A 0.0000
146 K A -1.9890
147 E A -1.5068
148 L A 0.0000
149 G A 0.0000
150 D A -1.7038
151 H A -1.4651
152 V A 0.0000
153 T A -1.8848
154 N A -1.9395
155 L A 0.0000
156 R A -3.1237
157 K A -2.6431
158 M A -1.3162
159 G A -1.6417
160 A A 0.0000
161 P A -1.6966
162 E A -2.1268
163 A A -0.9694
164 G A -0.3041
165 M A 0.9595
166 A A 0.0000
167 E A -0.1938
168 Y A 0.5561
169 L A 0.2911
170 F A 0.0000
171 D A 0.0000
172 K A -2.0349
173 H A -1.6457
174 T A -0.9798
175 L A -1.1276
176 G A -1.6447
4 S B -0.3826
5 P B -0.5430
6 S B -0.8555
7 Q B -0.8445
8 V B 0.0000
9 R B -0.8594
10 Q B -1.0139
11 N B -1.4445
12 Y B 0.0000
13 H B -1.9172
14 Q B -2.1897
15 D B -2.0347
16 A B 0.0000
17 E B -1.4156
18 A B -1.2320
19 A B -1.3828
20 I B 0.0000
21 N B 0.0000
22 R B -1.8168
23 Q B 0.0000
24 I B 0.0000
25 N B -0.9676
26 L B -0.3681
27 E B 0.0000
28 L B 0.0000
29 Y B -0.2499
30 A B 0.0000
31 S B 0.0000
32 Y B 0.0000
33 V B 0.0000
34 Y B 0.0000
35 L B 0.0000
36 S B 0.0000
37 M B 0.0000
38 S B 0.0000
39 C B -0.7881
40 Y B 0.0000
41 F B 0.0000
42 D B -1.5240
43 R B -1.5306
44 D B 0.0000
45 D B -1.9936
46 V B 0.0000
47 A B 0.0000
48 L B 0.0000
49 K B -2.1737
50 N B 0.0000
51 F B 0.0000
52 A B 0.0000
53 K B -1.5608
54 Y B -0.8794
55 F B 0.0000
56 L B -0.7621
57 H B -1.5892
58 Q B -1.4529
59 S B 0.0000
60 H B -1.9680
61 E B -2.3492
62 E B 0.0000
63 R B 0.0000
64 E B -2.7173
65 H B 0.0000
66 A B 0.0000
67 E B -1.8011
68 K B -1.9856
69 L B 0.0000
70 M B 0.0000
71 K B -2.2324
72 L B 0.0000
73 Q B 0.0000
74 N B 0.0000
75 Q B -1.5498
76 R B 0.0000
77 G B -0.8597
78 G B 0.0000
79 R B -0.9892
80 I B 0.0000
81 F B 0.0327
82 L B -1.0845
83 Q B -2.2078
84 D B -2.5848
85 I B 0.0000
86 K B -2.9507
87 K B -2.1921
88 P B 0.0000
89 D B -2.7512
90 R B -2.3707
91 D B -2.1759
92 D B -2.8247
93 W B 0.0000
94 E B -2.5080
95 S B -1.5372
96 G B 0.0000
97 L B -1.0450
98 N B -0.9916
99 A B 0.0000
100 M B 0.0000
101 E B -0.8955
102 C B -0.5800
103 A B 0.0000
104 L B 0.0000
105 H B -1.2442
106 L B -0.6022
107 E B 0.0000
108 K B -0.9449
109 S B -0.8241
110 V B 0.0000
111 N B 0.0000
112 Q B -1.6949
113 S B -1.5284
114 L B 0.0000
115 L B 0.0000
116 E B -2.4289
117 L B 0.0000
118 H B 0.0000
119 K B -2.5548
120 L B -1.9628
121 A B 0.0000
122 T B -2.0714
123 D B -2.7106
124 K B -2.6479
125 N B -2.6079
126 D B 0.0000
127 P B 0.0000
128 H B 0.0000
129 L B 0.0000
130 C B 0.0000
131 D B -0.2942
132 F B 0.0000
133 I B 0.0000
134 E B -0.2709
135 T B -0.0909
136 Y B 0.1703
137 Y B 0.0000
138 L B 0.0000
139 S B -0.7795
140 E B -1.3720
141 Q B 0.0000
142 V B -1.3738
143 K B -2.4278
144 S B -1.6948
145 I B 0.0000
146 K B -1.9397
147 E B -1.9659
148 L B 0.0000
149 G B 0.0000
150 D B -1.8361
151 H B -1.6237
152 V B 0.0000
153 T B -2.0504
154 N B -2.2705
155 L B 0.0000
156 R B -3.1831
157 K B -2.7414
158 M B -1.3939
159 G B -1.7362
160 A B 0.0000
161 P B -1.7865
162 E B -2.2413
163 A B -1.2687
164 G B -1.2186
165 M B -0.1217
166 A B 0.0000
167 E B -0.6004
168 Y B 0.0000
169 L B -0.1123
170 F B 0.0000
171 D B 0.0000
172 K B -1.1919
173 H B -1.2339
174 T B -0.8176
175 L B 0.0000
176 G B -1.1755
4 S C -0.4604
5 P C -0.6592
6 S C -1.0375
7 Q C -1.2849
8 V C -1.2739
9 R C -1.0912
10 Q C -1.0272
11 N C -1.5450
12 Y C 0.0000
13 H C -2.0481
14 Q C -2.3481
15 D C -2.2170
16 A C 0.0000
17 E C 0.0000
18 A C -0.9689
19 A C -1.0560
20 I C 0.0000
21 N C -0.1091
22 R C -0.5393
23 Q C 0.0000
24 I C 0.0000
25 N C -0.3773
26 L C 0.0215
27 E C 0.0000
28 L C -0.6090
29 Y C -0.3416
30 A C 0.0000
31 S C 0.0000
32 Y C 0.0339
33 V C 0.0000
34 Y C 0.0000
35 L C 0.8643
36 S C -0.4613
37 M C 0.0000
38 S C -0.1660
39 C C -0.2511
40 Y C 0.0000
41 F C 0.0000
42 D C -3.0541
43 R C -3.0462
44 D C -3.3694
45 D C -3.0010
46 V C -2.1779
47 A C -1.9799
48 L C -1.6574
49 K C -2.4269
50 N C 0.0000
51 F C 0.0000
52 A C -1.1005
53 K C -1.2524
54 Y C -0.6508
55 F C 0.0000
56 L C -0.1862
57 H C -1.4183
58 Q C -1.3674
59 S C 0.0000
60 H C -2.3304
61 E C -2.8793
62 E C 0.0000
63 R C -2.6693
64 E C -3.4735
65 H C 0.0000
66 A C 0.0000
67 E C -3.0555
68 K C -2.3325
69 L C 0.0000
70 M C -1.8054
71 K C -2.5858
72 L C 0.0000
73 Q C 0.0000
74 N C -2.1369
75 Q C -1.9881
76 R C 0.0000
77 G C 0.0000
78 G C 0.0000
79 R C -1.1760
80 I C 0.4116
81 F C 2.1030
82 L C 1.3406
83 Q C -1.1124
84 D C -2.5564
85 I C -1.7062
86 K C -3.1323
87 K C -3.3883
88 P C -2.6069
89 D C -3.4756
90 R C -3.4212
91 D C -3.5750
92 D C -3.0053
93 W C 0.0000
94 E C -2.3647
95 S C 0.0000
96 G C 0.0000
97 L C -0.8641
98 N C -0.9501
99 A C 0.0000
100 M C 0.0000
101 E C -1.3698
102 C C -0.8169
103 A C 0.0000
104 L C 0.0000
105 H C -1.3504
106 L C -0.5786
107 E C 0.0000
108 K C -1.0672
109 S C -0.8747
110 V C 0.0000
111 N C 0.0000
112 Q C -1.7411
113 S C -1.4121
114 L C 0.0000
115 L C -1.7352
116 E C -2.4584
117 L C 0.0000
118 H C 0.0000
119 K C -2.8471
120 L C -2.1703
121 A C 0.0000
122 T C -2.3536
123 D C -2.8826
124 K C -2.8069
125 N C -2.7298
126 D C 0.0000
127 P C 0.0000
128 H C 0.0000
129 L C 0.0000
130 C C -0.4601
131 D C -0.1351
132 F C 0.0000
133 I C 0.0000
134 E C -0.1100
135 T C 0.1250
136 Y C 0.5941
137 Y C 0.0000
138 L C 0.0000
139 S C -0.7575
140 E C -1.2110
141 Q C 0.0000
142 V C 0.0000
143 K C -2.2705
144 S C -1.4239
145 I C 0.0000
146 K C 0.0000
147 E C -1.2025
148 L C 0.0000
149 G C 0.0000
150 D C 0.0000
151 H C 0.0000
152 V C 0.0000
153 T C 0.0000
154 N C -1.1654
155 L C 0.0000
156 R C -2.3591
157 K C -2.1542
158 M C 0.0000
159 G C -1.4384
160 A C -1.2818
161 P C -1.5521
162 E C -2.1056
163 A C -0.9362
164 G C -0.3578
165 M C 0.8415
166 A C 0.0000
167 E C -0.0060
168 Y C 0.8850
169 L C 0.2524
170 F C 0.0000
171 D C -0.8670
172 K C -1.8634
173 H C -1.1072
174 T C -0.7733
175 L C 0.0000
176 G C -1.4730
4 S D -0.5183
5 P D -0.8806
6 S D -1.3940
7 Q D -1.8037
8 V D -1.7337
9 R D -1.6557
10 Q D -1.3186
11 N D -1.5733
12 Y D 0.0000
13 H D -2.1804
14 Q D -2.2625
15 D D -2.1960
16 A D 0.0000
17 E D -1.5608
18 A D -1.3006
19 A D -1.4900
20 I D 0.0000
21 N D -0.7134
22 R D -1.5936
23 Q D 0.0000
24 I D 0.0000
25 N D -0.6536
26 L D -0.2613
27 E D 0.0000
28 L D -0.6966
29 Y D -0.2197
30 A D 0.0000
31 S D 0.0000
32 Y D 0.0342
33 V D 0.0000
34 Y D 0.0000
35 L D 0.8037
36 S D -0.4912
37 M D 0.0000
38 S D 0.0000
39 C D -0.4610
40 Y D 0.0000
41 F D 0.0000
42 D D -3.1891
43 R D -3.0141
44 D D -3.2822
45 D D -2.7998
46 V D 0.0000
47 A D 0.0000
48 L D 0.0000
49 K D -2.8306
50 N D -1.9423
51 F D 0.0000
52 A D 0.0000
53 K D -2.3551
54 Y D -1.1514
55 F D 0.0000
56 L D -0.6267
57 H D -1.8857
58 Q D -1.7540
59 S D 0.0000
60 H D -2.5475
61 E D -3.1419
62 E D 0.0000
63 R D -3.1110
64 E D -3.6848
65 H D 0.0000
66 A D 0.0000
67 E D -3.1499
68 K D -2.3548
69 L D 0.0000
70 M D -1.7409
71 K D -2.4173
72 L D 0.0000
73 Q D 0.0000
74 N D -1.7641
75 Q D -1.9711
76 R D 0.0000
77 G D -1.3889
78 G D 0.0000
79 R D -1.1739
80 I D 0.3088
81 F D 1.8963
82 L D 1.1859
83 Q D -1.2038
84 D D -2.4278
85 I D -1.4412
86 K D -2.9780
87 K D -3.2305
88 P D 0.0000
89 D D -3.4067
90 R D -3.5399
91 D D -3.7575
92 D D -3.5988
93 W D 0.0000
94 E D -2.7736
95 S D -1.6384
96 G D 0.0000
97 L D 0.0000
98 N D -1.1040
99 A D 0.0000
100 M D 0.0000
101 E D -1.4521
102 C D -0.8922
103 A D 0.0000
104 L D 0.0000
105 H D -1.4928
106 L D 0.0000
107 E D 0.0000
108 K D -1.0761
109 S D -0.8252
110 V D 0.0000
111 N D 0.0000
112 Q D -1.4257
113 S D -1.3959
114 L D 0.0000
115 L D 0.0000
116 E D -2.2981
117 L D 0.0000
118 H D 0.0000
119 K D -2.4553
120 L D -1.9003
121 A D 0.0000
122 T D -2.1022
123 D D -2.6399
124 K D -2.5697
125 N D -2.3885
126 D D 0.0000
127 P D -0.8040
128 H D 0.0000
129 L D 0.0000
130 C D 0.0000
131 D D -0.2851
132 F D 0.0000
133 I D 0.0000
134 E D -0.0712
135 T D 0.1997
136 Y D 0.7421
137 Y D 0.0000
138 L D 0.0000
139 S D -0.4441
140 E D -0.6535
141 Q D 0.0000
142 V D 0.0000
143 K D -2.2427
144 S D -1.5626
145 I D 0.0000
146 K D -2.0772
147 E D -1.9365
148 L D 0.0000
149 G D 0.0000
150 D D -1.8513
151 H D -1.4235
152 V D 0.0000
153 T D -1.9761
154 N D -1.8165
155 L D 0.0000
156 R D -3.1057
157 K D -2.6003
158 M D -1.4226
159 G D -1.7114
160 A D 0.0000
161 P D -1.7437
162 E D -2.2828
163 A D -1.3516
164 G D -1.3434
165 M D -0.4538
166 A D 0.0000
167 E D -0.8072
168 Y D 0.0000
169 L D -0.1408
170 F D 0.0000
171 D D 0.0000
172 K D -1.1000
173 H D -1.2295
174 T D -0.6954
175 L D -0.8537
176 G D -1.2242
4 S E -0.3970
5 P E -0.5567
6 S E -0.9402
7 Q E -1.0237
8 V E 0.0000
9 R E -0.7770
10 Q E -0.9302
11 N E -1.2614
12 Y E 0.0000
13 H E -1.7185
14 Q E -2.0562
15 D E -1.9321
16 A E 0.0000
17 E E 0.0000
18 A E -1.1268
19 A E -1.3512
20 I E 0.0000
21 N E -1.0822
22 R E -1.8640
23 Q E 0.0000
24 I E 0.0000
25 N E -1.0002
26 L E -0.4837
27 E E 0.0000
28 L E 0.0000
29 Y E -0.3782
30 A E 0.0000
31 S E 0.0000
32 Y E 0.0000
33 V E 0.0000
34 Y E 0.0000
35 L E 0.0000
36 S E 0.0000
37 M E 0.0000
38 S E 0.0000
39 C E -0.8282
40 Y E 0.0000
41 F E 0.0000
42 D E -1.5715
43 R E -1.3645
44 D E 0.0000
45 D E -1.6856
46 V E 0.0000
47 A E 0.0000
48 L E 0.0000
49 K E -2.4011
50 N E -1.8376
51 F E 0.0000
52 A E 0.0000
53 K E -2.3539
54 Y E -1.2401
55 F E 0.0000
56 L E -1.0803
57 H E -1.8192
58 Q E -1.6491
59 S E 0.0000
60 H E -2.0148
61 E E -2.5720
62 E E 0.0000
63 R E -1.8754
64 E E -2.8705
65 H E -1.6520
66 A E 0.0000
67 E E -1.8153
68 K E -1.8247
69 L E 0.0000
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174 T F -0.7244
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157 K G -2.3984
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157 K H -2.6534
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172 K H -1.2962
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174 T H -0.7946
175 L H -0.9615
176 G H -1.4277
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Laboratory of Theory of Biopolymers 2018