| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYAMGWFRQAPGKGRELVAAISSSGGSTYYPDSVEGRFTISRDNAKRMVYLQMNSLRAEDTAVYYCARLRGGRLDEATADYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:10)
[INFO] Main: Simulation completed successfully. (00:01:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.0700 | |
| 2 | V | A | -1.0291 | |
| 3 | Q | A | -1.3357 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.3129 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.7033 | |
| 8 | G | A | -0.9502 | |
| 9 | G | A | -0.7560 | |
| 10 | G | A | -0.0574 | |
| 11 | L | A | 0.9622 | |
| 12 | V | A | -0.0784 | |
| 13 | Q | A | -1.3752 | |
| 14 | P | A | -1.6781 | |
| 15 | G | A | -1.4804 | |
| 16 | G | A | -0.9917 | |
| 17 | S | A | -1.0898 | |
| 18 | L | A | -0.9521 | |
| 19 | R | A | -2.0485 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4622 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.4078 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.0946 | |
| 26 | G | A | -1.1860 | |
| 27 | F | A | -0.5443 | |
| 28 | T | A | -0.2465 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -0.6684 | |
| 31 | S | A | -0.1827 | |
| 32 | Y | A | -0.1664 | |
| 33 | A | A | -0.5011 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | F | A | 0.0000 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -1.9041 | |
| 40 | A | A | -1.7696 | |
| 41 | P | A | -1.2218 | |
| 42 | G | A | -1.6853 | |
| 43 | K | A | -2.7941 | |
| 44 | G | A | -2.4414 | |
| 45 | R | A | -2.4970 | |
| 46 | E | A | -2.2940 | |
| 47 | L | A | -1.1231 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | S | A | -0.6634 | |
| 53 | S | A | -0.4604 | |
| 54 | S | A | -0.7319 | |
| 55 | G | A | -0.9232 | |
| 56 | G | A | -0.7896 | |
| 57 | S | A | -0.4859 | |
| 58 | T | A | -0.2652 | |
| 59 | Y | A | -0.8684 | |
| 60 | Y | A | -1.0778 | |
| 61 | P | A | -1.7261 | |
| 62 | D | A | -2.5556 | |
| 63 | S | A | -1.8020 | |
| 64 | V | A | 0.0000 | |
| 65 | E | A | -2.7060 | |
| 66 | G | A | -1.8182 | |
| 67 | R | A | -1.4735 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.8182 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.5207 | |
| 72 | R | A | -1.1365 | |
| 73 | D | A | -1.7612 | |
| 74 | N | A | -1.8701 | |
| 75 | A | A | -1.5297 | |
| 76 | K | A | -2.4974 | |
| 77 | R | A | -2.1898 | |
| 78 | M | A | -1.1644 | |
| 79 | V | A | 0.0000 | |
| 80 | Y | A | -0.5382 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.1902 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -1.3751 | |
| 85 | S | A | -1.2824 | |
| 86 | L | A | 0.0000 | |
| 87 | R | A | -2.6127 | |
| 88 | A | A | -1.9051 | |
| 89 | E | A | -2.3709 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.9064 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | -0.5012 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | -0.3682 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | R | A | 0.0000 | |
| 99 | L | A | 0.0000 | |
| 100 | R | A | -2.4350 | |
| 101 | G | A | -2.2389 | |
| 102 | G | A | -2.4432 | |
| 103 | R | A | -3.2119 | |
| 104 | L | A | -2.1993 | |
| 105 | D | A | -2.4871 | |
| 106 | E | A | -3.0282 | |
| 107 | A | A | -2.2384 | |
| 108 | T | A | -1.7080 | |
| 109 | A | A | -0.8480 | |
| 110 | D | A | -1.0733 | |
| 111 | Y | A | 0.1166 | |
| 112 | W | A | 0.3055 | |
| 113 | G | A | -0.1576 | |
| 114 | Q | A | -1.0076 | |
| 115 | G | A | -0.6138 | |
| 116 | T | A | -0.7833 | |
| 117 | Q | A | -0.9809 | |
| 118 | V | A | 0.0000 | |
| 119 | T | A | -0.3516 | |
| 120 | V | A | 0.0000 | |
| 121 | S | A | -0.8353 | |
| 122 | S | A | -0.5854 |