| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAPAVTVVYYHITYGETGGNSPVQAFKVPGSKSTATISGLSPGVDYTITVYATYRLWGSWQYYYSSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:35)
[INFO] Main: Simulation completed successfully. (00:00:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.7414 | |
| 2 | S | A | 0.7680 | |
| 3 | S | A | 0.7423 | |
| 4 | V | A | 0.5255 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.4988 | |
| 7 | K | A | -2.5628 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.8973 | |
| 10 | V | A | 0.0746 | |
| 11 | V | A | 1.5125 | |
| 12 | A | A | 0.8692 | |
| 13 | A | A | 0.2793 | |
| 14 | T | A | -0.3947 | |
| 15 | P | A | -0.8124 | |
| 16 | T | A | -0.5405 | |
| 17 | S | A | -0.3348 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.6950 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.9195 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.3977 | |
| 24 | A | A | -1.1613 | |
| 25 | P | A | 0.0145 | |
| 26 | A | A | 0.3330 | |
| 27 | V | A | 0.0000 | |
| 28 | T | A | 0.0781 | |
| 29 | V | A | 0.3931 | |
| 30 | V | A | 0.6582 | |
| 31 | Y | A | -0.2380 | |
| 32 | Y | A | 0.0000 | |
| 33 | H | A | -0.4711 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.0488 | |
| 36 | Y | A | 0.0000 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.4903 | |
| 39 | T | A | -1.4528 | |
| 40 | G | A | -1.3319 | |
| 41 | G | A | -1.4086 | |
| 42 | N | A | -1.5124 | |
| 43 | S | A | -0.8127 | |
| 44 | P | A | -0.0850 | |
| 45 | V | A | 0.9104 | |
| 46 | Q | A | 0.0991 | |
| 47 | A | A | -0.0909 | |
| 48 | F | A | -0.5241 | |
| 49 | K | A | -1.4933 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.9472 | |
| 52 | G | A | -0.6381 | |
| 53 | S | A | -0.9527 | |
| 54 | K | A | -2.0240 | |
| 55 | S | A | -1.3633 | |
| 56 | T | A | -0.7432 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2225 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.4834 | |
| 61 | G | A | -0.6920 | |
| 62 | L | A | 0.0000 | |
| 63 | S | A | -0.9202 | |
| 64 | P | A | -1.0732 | |
| 65 | G | A | -1.2086 | |
| 66 | V | A | -1.2110 | |
| 67 | D | A | -2.5061 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.9224 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | 0.0687 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.3901 | |
| 74 | A | A | 0.0000 | |
| 75 | T | A | 0.0000 | |
| 76 | Y | A | 0.6181 | |
| 77 | R | A | -0.2816 | |
| 78 | L | A | 0.4323 | |
| 79 | W | A | 0.8532 | |
| 80 | G | A | 0.1106 | |
| 81 | S | A | 0.3248 | |
| 82 | W | A | 0.7784 | |
| 83 | Q | A | 0.0485 | |
| 84 | Y | A | 1.0451 | |
| 85 | Y | A | 1.1564 | |
| 86 | Y | A | 1.5245 | |
| 87 | S | A | 0.0000 | |
| 88 | S | A | 0.3277 | |
| 89 | P | A | 0.2359 | |
| 90 | I | A | 0.1388 | |
| 91 | S | A | -0.3489 | |
| 92 | I | A | -0.5485 | |
| 93 | N | A | -1.8912 | |
| 94 | Y | A | -1.6661 | |
| 95 | R | A | -2.6217 | |
| 96 | T | A | -1.3438 |