Project name: query_structure

Status: done

Started: 2026-03-17 01:28:17
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Chain sequence(s) A: VSSVPTKLEVVAATPTSLLISWDAPAVTVVYYHITYGETGGNSPVQAFKVPGSKSTATISGLSPGVDYTITVYATYRLWGSWQYYYSSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:35)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:36)
Show buried residues

Minimal score value
-2.6217
Maximal score value
1.7414
Average score
-0.3104
Total score value
-29.7995

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.7414
2 S A 0.7680
3 S A 0.7423
4 V A 0.5255
5 P A 0.0000
6 T A -1.4988
7 K A -2.5628
8 L A 0.0000
9 E A -1.8973
10 V A 0.0746
11 V A 1.5125
12 A A 0.8692
13 A A 0.2793
14 T A -0.3947
15 P A -0.8124
16 T A -0.5405
17 S A -0.3348
18 L A 0.0000
19 L A 0.6950
20 I A 0.0000
21 S A -0.9195
22 W A 0.0000
23 D A -2.3977
24 A A -1.1613
25 P A 0.0145
26 A A 0.3330
27 V A 0.0000
28 T A 0.0781
29 V A 0.3931
30 V A 0.6582
31 Y A -0.2380
32 Y A 0.0000
33 H A -0.4711
34 I A 0.0000
35 T A 0.0488
36 Y A 0.0000
37 G A 0.0000
38 E A -1.4903
39 T A -1.4528
40 G A -1.3319
41 G A -1.4086
42 N A -1.5124
43 S A -0.8127
44 P A -0.0850
45 V A 0.9104
46 Q A 0.0991
47 A A -0.0909
48 F A -0.5241
49 K A -1.4933
50 V A 0.0000
51 P A -0.9472
52 G A -0.6381
53 S A -0.9527
54 K A -2.0240
55 S A -1.3633
56 T A -0.7432
57 A A 0.0000
58 T A 0.2225
59 I A 0.0000
60 S A -0.4834
61 G A -0.6920
62 L A 0.0000
63 S A -0.9202
64 P A -1.0732
65 G A -1.2086
66 V A -1.2110
67 D A -2.5061
68 Y A 0.0000
69 T A -0.9224
70 I A 0.0000
71 T A 0.0687
72 V A 0.0000
73 Y A 0.3901
74 A A 0.0000
75 T A 0.0000
76 Y A 0.6181
77 R A -0.2816
78 L A 0.4323
79 W A 0.8532
80 G A 0.1106
81 S A 0.3248
82 W A 0.7784
83 Q A 0.0485
84 Y A 1.0451
85 Y A 1.1564
86 Y A 1.5245
87 S A 0.0000
88 S A 0.3277
89 P A 0.2359
90 I A 0.1388
91 S A -0.3489
92 I A -0.5485
93 N A -1.8912
94 Y A -1.6661
95 R A -2.6217
96 T A -1.3438
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Laboratory of Theory of Biopolymers 2018