Project name: query_structure

Status: done

Started: 2026-03-16 23:38:36
Settings
Chain sequence(s) A: GSVPCGESCVWIPCITSIAGCSCSNKVCYMD
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:10)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:10)
Show buried residues

Minimal score value
-1.6904
Maximal score value
2.5099
Average score
0.4405
Total score value
13.6554

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.3944
2 S A -0.0811
3 V A 1.2603
4 P A 0.5131
5 C A 0.4165
6 G A -0.2480
7 E A 0.0317
8 S A 0.3303
9 C A 0.9508
10 V A 1.2406
11 W A 2.1123
12 I A 2.4458
13 P A 1.4512
14 C A 0.0000
15 I A 2.5099
16 T A 1.5301
17 S A 1.4268
18 I A 2.2509
19 A A 1.1428
20 G A 0.1291
21 C A 0.0000
22 S A -0.0229
23 C A 0.0978
24 S A -0.6574
25 N A -1.6904
26 K A -1.3371
27 V A -0.5237
28 C A 0.0000
29 Y A 0.0740
30 M A 0.1002
31 D A -1.4038
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Laboratory of Theory of Biopolymers 2018