Project name: query_structure

Status: done

Started: 2026-03-17 00:04:21
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Chain sequence(s) A: MASGAAGGGLGEGLVQAGGSLRLSCAASGRTFNSYPMAWFRQAPGKEREFVAALGWSGGSTDYADSVKGRFTISRDNSKNTVYLEMNSLKPDDTGVYYCALRRRGGVYNTYSGEKDYDYWGQGTQVTVS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:28)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:29)
Show buried residues

Minimal score value
-3.2971
Maximal score value
1.6024
Average score
-0.907
Total score value
-117.0033

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.9117
2 A A 0.0000
3 S A -0.2885
4 G A -0.5983
5 A A -0.9813
6 A A -1.4132
7 G A -1.6092
8 G A -1.0965
9 G A -0.2401
10 L A 0.8836
11 G A -0.3528
12 E A -1.7475
13 G A -0.5403
14 L A 0.7447
15 V A -0.1532
16 Q A -1.1935
17 A A -1.3182
18 G A -1.2579
19 G A -1.0510
20 S A -1.3999
21 L A 0.0000
22 R A -2.2233
23 L A 0.0000
24 S A -0.6537
25 C A 0.0000
26 A A -0.6581
27 A A -0.5894
28 S A -0.7495
29 G A -1.4477
30 R A -2.4034
31 T A -1.8946
32 F A 0.0000
33 N A -2.0471
34 S A -1.4462
35 Y A -1.1040
36 P A -0.7208
37 M A 0.0000
38 A A 0.0000
39 W A 0.0000
40 F A 0.0000
41 R A 0.0000
42 Q A -1.9077
43 A A -1.9630
44 P A -1.3769
45 G A -1.9089
46 K A -3.2295
47 E A -3.2971
48 R A -2.4768
49 E A -1.8180
50 F A -0.7678
51 V A 0.0000
52 A A 0.0000
53 A A 0.0000
54 L A 0.0000
55 G A -0.4322
56 W A -0.3108
57 S A -0.5618
58 G A -0.7787
59 G A -0.6224
60 S A -0.7195
61 T A -0.5513
62 D A -0.9637
63 Y A -1.1585
64 A A -1.5092
65 D A -2.5114
66 S A -1.8070
67 V A 0.0000
68 K A -2.7187
69 G A -1.7634
70 R A -1.5075
71 F A 0.0000
72 T A -1.0881
73 I A 0.0000
74 S A -0.6846
75 R A -1.3261
76 D A -2.1762
77 N A -2.6789
78 S A -2.1216
79 K A -2.6902
80 N A -2.6684
81 T A -1.6268
82 V A 0.0000
83 Y A -0.7383
84 L A 0.0000
85 E A -1.7867
86 M A 0.0000
87 N A -1.4052
88 S A -1.1496
89 L A 0.0000
90 K A -2.0548
91 P A -1.8101
92 D A -2.2549
93 D A 0.0000
94 T A -0.9091
95 G A 0.0000
96 V A -0.5851
97 Y A 0.0000
98 Y A -0.3968
99 C A 0.0000
100 A A 0.0000
101 L A 0.0000
102 R A 0.0000
103 R A -3.1808
104 R A -2.7324
105 G A -1.3409
106 G A -0.4820
107 V A 1.6024
108 Y A 1.3319
109 N A -0.3563
110 T A -0.0426
111 Y A -0.2213
112 S A -0.6729
113 G A -1.5445
114 E A -2.4850
115 K A -2.8032
116 D A -2.3714
117 Y A 0.0000
118 D A -1.8666
119 Y A 0.1414
120 W A 0.1341
121 G A -0.1279
122 Q A -1.1713
123 G A -0.8566
124 T A 0.0000
125 Q A -1.3830
126 V A 0.0000
127 T A -0.4157
128 V A 0.0000
129 S A -0.7062
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Laboratory of Theory of Biopolymers 2018