| Chain sequence(s) |
A: MASGAAGGGLGEGLVQAGGSLRLSCAASGRTFNSYPMAWFRQAPGKEREFVAALGWSGGSTDYADSVKGRFTISRDNSKNTVYLEMNSLKPDDTGVYYCALRRRGGVYNTYSGEKDYDYWGQGTQVTVS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:28)
[INFO] Main: Simulation completed successfully. (00:01:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.9117 | |
| 2 | A | A | 0.0000 | |
| 3 | S | A | -0.2885 | |
| 4 | G | A | -0.5983 | |
| 5 | A | A | -0.9813 | |
| 6 | A | A | -1.4132 | |
| 7 | G | A | -1.6092 | |
| 8 | G | A | -1.0965 | |
| 9 | G | A | -0.2401 | |
| 10 | L | A | 0.8836 | |
| 11 | G | A | -0.3528 | |
| 12 | E | A | -1.7475 | |
| 13 | G | A | -0.5403 | |
| 14 | L | A | 0.7447 | |
| 15 | V | A | -0.1532 | |
| 16 | Q | A | -1.1935 | |
| 17 | A | A | -1.3182 | |
| 18 | G | A | -1.2579 | |
| 19 | G | A | -1.0510 | |
| 20 | S | A | -1.3999 | |
| 21 | L | A | 0.0000 | |
| 22 | R | A | -2.2233 | |
| 23 | L | A | 0.0000 | |
| 24 | S | A | -0.6537 | |
| 25 | C | A | 0.0000 | |
| 26 | A | A | -0.6581 | |
| 27 | A | A | -0.5894 | |
| 28 | S | A | -0.7495 | |
| 29 | G | A | -1.4477 | |
| 30 | R | A | -2.4034 | |
| 31 | T | A | -1.8946 | |
| 32 | F | A | 0.0000 | |
| 33 | N | A | -2.0471 | |
| 34 | S | A | -1.4462 | |
| 35 | Y | A | -1.1040 | |
| 36 | P | A | -0.7208 | |
| 37 | M | A | 0.0000 | |
| 38 | A | A | 0.0000 | |
| 39 | W | A | 0.0000 | |
| 40 | F | A | 0.0000 | |
| 41 | R | A | 0.0000 | |
| 42 | Q | A | -1.9077 | |
| 43 | A | A | -1.9630 | |
| 44 | P | A | -1.3769 | |
| 45 | G | A | -1.9089 | |
| 46 | K | A | -3.2295 | |
| 47 | E | A | -3.2971 | |
| 48 | R | A | -2.4768 | |
| 49 | E | A | -1.8180 | |
| 50 | F | A | -0.7678 | |
| 51 | V | A | 0.0000 | |
| 52 | A | A | 0.0000 | |
| 53 | A | A | 0.0000 | |
| 54 | L | A | 0.0000 | |
| 55 | G | A | -0.4322 | |
| 56 | W | A | -0.3108 | |
| 57 | S | A | -0.5618 | |
| 58 | G | A | -0.7787 | |
| 59 | G | A | -0.6224 | |
| 60 | S | A | -0.7195 | |
| 61 | T | A | -0.5513 | |
| 62 | D | A | -0.9637 | |
| 63 | Y | A | -1.1585 | |
| 64 | A | A | -1.5092 | |
| 65 | D | A | -2.5114 | |
| 66 | S | A | -1.8070 | |
| 67 | V | A | 0.0000 | |
| 68 | K | A | -2.7187 | |
| 69 | G | A | -1.7634 | |
| 70 | R | A | -1.5075 | |
| 71 | F | A | 0.0000 | |
| 72 | T | A | -1.0881 | |
| 73 | I | A | 0.0000 | |
| 74 | S | A | -0.6846 | |
| 75 | R | A | -1.3261 | |
| 76 | D | A | -2.1762 | |
| 77 | N | A | -2.6789 | |
| 78 | S | A | -2.1216 | |
| 79 | K | A | -2.6902 | |
| 80 | N | A | -2.6684 | |
| 81 | T | A | -1.6268 | |
| 82 | V | A | 0.0000 | |
| 83 | Y | A | -0.7383 | |
| 84 | L | A | 0.0000 | |
| 85 | E | A | -1.7867 | |
| 86 | M | A | 0.0000 | |
| 87 | N | A | -1.4052 | |
| 88 | S | A | -1.1496 | |
| 89 | L | A | 0.0000 | |
| 90 | K | A | -2.0548 | |
| 91 | P | A | -1.8101 | |
| 92 | D | A | -2.2549 | |
| 93 | D | A | 0.0000 | |
| 94 | T | A | -0.9091 | |
| 95 | G | A | 0.0000 | |
| 96 | V | A | -0.5851 | |
| 97 | Y | A | 0.0000 | |
| 98 | Y | A | -0.3968 | |
| 99 | C | A | 0.0000 | |
| 100 | A | A | 0.0000 | |
| 101 | L | A | 0.0000 | |
| 102 | R | A | 0.0000 | |
| 103 | R | A | -3.1808 | |
| 104 | R | A | -2.7324 | |
| 105 | G | A | -1.3409 | |
| 106 | G | A | -0.4820 | |
| 107 | V | A | 1.6024 | |
| 108 | Y | A | 1.3319 | |
| 109 | N | A | -0.3563 | |
| 110 | T | A | -0.0426 | |
| 111 | Y | A | -0.2213 | |
| 112 | S | A | -0.6729 | |
| 113 | G | A | -1.5445 | |
| 114 | E | A | -2.4850 | |
| 115 | K | A | -2.8032 | |
| 116 | D | A | -2.3714 | |
| 117 | Y | A | 0.0000 | |
| 118 | D | A | -1.8666 | |
| 119 | Y | A | 0.1414 | |
| 120 | W | A | 0.1341 | |
| 121 | G | A | -0.1279 | |
| 122 | Q | A | -1.1713 | |
| 123 | G | A | -0.8566 | |
| 124 | T | A | 0.0000 | |
| 125 | Q | A | -1.3830 | |
| 126 | V | A | 0.0000 | |
| 127 | T | A | -0.4157 | |
| 128 | V | A | 0.0000 | |
| 129 | S | A | -0.7062 |