| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVVNGKVLVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTIGHPLFNKLGDTENPTAPQHCGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFFVRCGPDGHPLPDAPPPSPLYVRPPPSSPYAVRPPRDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPAPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9421 | |
| 2 | L | A | 1.9616 | |
| 3 | P | A | 0.8375 | |
| 4 | P | A | 0.3886 | |
| 5 | T | A | 0.1270 | |
| 6 | T | A | 0.1287 | |
| 7 | P | A | 0.1919 | |
| 8 | V | A | 1.2117 | |
| 9 | A | A | 0.0944 | |
| 10 | K | A | -1.0154 | |
| 11 | V | A | -0.1477 | |
| 12 | Q | A | -1.3811 | |
| 13 | S | A | -1.5259 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3647 | |
| 16 | E | A | -2.4097 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4698 | |
| 20 | P | A | 0.1368 | |
| 21 | T | A | 0.1589 | |
| 22 | S | A | -0.0971 | |
| 23 | L | A | 0.0857 | |
| 24 | F | A | -0.0390 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2862 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8950 | |
| 31 | R | A | -2.6791 | |
| 32 | L | A | -0.8006 | |
| 33 | L | A | 1.1540 | |
| 34 | T | A | 1.3643 | |
| 35 | V | A | 1.8218 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2352 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6184 | |
| 40 | K | A | -1.6553 | |
| 41 | D | A | -0.6722 | |
| 42 | I | A | 1.2955 | |
| 43 | V | A | 2.2521 | |
| 44 | V | A | 1.6758 | |
| 45 | N | A | -0.5309 | |
| 46 | G | A | -0.3598 | |
| 47 | K | A | -0.1244 | |
| 48 | V | A | 2.0463 | |
| 49 | L | A | 2.5479 | |
| 50 | V | A | 1.4535 | |
| 51 | P | A | 0.3461 | |
| 52 | K | A | -0.6798 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1433 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3684 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2288 | |
| 70 | K | A | -1.7740 | |
| 71 | F | A | -0.6301 | |
| 72 | A | A | -0.5690 | |
| 73 | L | A | -0.8646 | |
| 74 | P | A | -1.2131 | |
| 75 | Q | A | -2.5119 | |
| 76 | K | A | -3.1128 | |
| 77 | D | A | -2.9923 | |
| 78 | F | A | -1.6752 | |
| 79 | Y | A | -1.8853 | |
| 80 | D | A | -2.6850 | |
| 81 | P | A | -2.3643 | |
| 82 | E | A | -3.0532 | |
| 83 | K | A | -3.3900 | |
| 84 | E | A | -2.4575 | |
| 85 | R | A | -1.2948 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6758 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9577 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3437 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6960 | |
| 99 | G | A | -0.5421 | |
| 100 | P | A | -0.4098 | |
| 101 | L | A | 0.0318 | |
| 102 | G | A | -0.2198 | |
| 103 | K | A | -0.6116 | |
| 104 | G | A | -0.4382 | |
| 105 | T | A | -0.4448 | |
| 106 | I | A | 0.0000 | |
| 107 | G | A | 0.1498 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4435 | |
| 110 | L | A | 0.3406 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0821 | |
| 113 | K | A | -0.3682 | |
| 114 | L | A | -0.8129 | |
| 115 | G | A | -0.8293 | |
| 116 | D | A | -1.2419 | |
| 117 | T | A | -0.9995 | |
| 118 | E | A | -1.8079 | |
| 119 | N | A | -1.9903 | |
| 120 | P | A | -1.4524 | |
| 121 | T | A | -0.7534 | |
| 122 | A | A | -0.5019 | |
| 123 | P | A | -0.1279 | |
| 124 | Q | A | -0.4542 | |
| 125 | H | A | -0.5146 | |
| 126 | C | A | -0.7727 | |
| 127 | G | A | -1.2476 | |
| 128 | A | A | -1.1888 | |
| 129 | D | A | -2.1971 | |
| 130 | D | A | -1.7189 | |
| 131 | R | A | -1.1204 | |
| 132 | V | A | 0.2455 | |
| 133 | A | A | 0.4711 | |
| 134 | F | A | 0.3045 | |
| 135 | S | A | -0.0624 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.4617 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.2336 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5555 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1920 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1546 | |
| 157 | D | A | 0.3262 | |
| 158 | L | A | 0.8076 | |
| 159 | A | A | 0.1870 | |
| 160 | E | A | -1.4469 | |
| 161 | P | A | -0.1999 | |
| 162 | C | A | 0.1913 | |
| 163 | P | A | -0.1692 | |
| 164 | G | A | -0.0745 | |
| 165 | L | A | 0.5935 | |
| 166 | P | A | -0.1148 | |
| 167 | P | A | -0.3401 | |
| 168 | G | A | -0.4484 | |
| 169 | A | A | -0.0261 | |
| 170 | C | A | 0.6597 | |
| 171 | P | A | 0.5353 | |
| 172 | P | A | 0.8633 | |
| 173 | I | A | 2.0314 | |
| 174 | Q | A | 0.8646 | |
| 175 | L | A | 1.4900 | |
| 176 | V | A | 0.8614 | |
| 177 | N | A | -0.2929 | |
| 178 | S | A | 0.0318 | |
| 179 | V | A | 0.4329 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3866 | |
| 182 | D | A | 0.0849 | |
| 183 | G | A | -0.1567 | |
| 184 | D | A | -0.5348 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0678 | |
| 190 | F | A | 0.0371 | |
| 191 | G | A | -0.1002 | |
| 192 | N | A | -0.2565 | |
| 193 | M | A | -0.1163 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4218 | |
| 197 | E | A | -2.6496 | |
| 198 | L | A | -1.2478 | |
| 199 | Q | A | -2.5677 | |
| 200 | Q | A | -3.3200 | |
| 201 | D | A | -3.5563 | |
| 202 | R | A | -3.3281 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1935 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3564 | |
| 211 | S | A | -1.9027 | |
| 212 | T | A | -1.4512 | |
| 213 | R | A | -2.1074 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1436 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3719 | |
| 220 | L | A | 0.5990 | |
| 221 | K | A | -1.1220 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8190 | |
| 224 | N | A | -1.5819 | |
| 225 | E | A | -1.2381 | |
| 226 | A | A | -0.5945 | |
| 227 | Y | A | -0.3552 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6732 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0820 | |
| 234 | F | A | 0.2636 | |
| 235 | G | A | -0.8081 | |
| 236 | R | A | -2.4472 | |
| 237 | R | A | -2.5363 | |
| 238 | E | A | -1.5114 | |
| 239 | Q | A | 0.1325 | |
| 240 | V | A | 1.6071 | |
| 241 | Y | A | 1.2376 | |
| 242 | A | A | 0.3641 | |
| 243 | R | A | -0.5465 | |
| 244 | H | A | -0.7059 | |
| 245 | F | A | 0.0544 | |
| 246 | F | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.6444 | |
| 249 | C | A | -0.9901 | |
| 250 | G | A | -1.0189 | |
| 251 | P | A | -1.1202 | |
| 252 | D | A | -1.7622 | |
| 253 | G | A | -1.4111 | |
| 254 | H | A | -1.5747 | |
| 255 | P | A | -1.3814 | |
| 256 | L | A | -0.5295 | |
| 257 | P | A | -0.8584 | |
| 258 | D | A | -2.1234 | |
| 259 | A | A | -0.8961 | |
| 260 | P | A | -0.9749 | |
| 261 | P | A | -0.5430 | |
| 262 | P | A | -0.1576 | |
| 263 | S | A | 0.0174 | |
| 264 | P | A | 0.6986 | |
| 265 | L | A | 1.7029 | |
| 266 | Y | A | 1.1696 | |
| 267 | V | A | 1.0900 | |
| 268 | R | A | -1.0343 | |
| 269 | P | A | -0.3608 | |
| 270 | P | A | -0.5720 | |
| 271 | P | A | -0.3704 | |
| 272 | S | A | -0.1279 | |
| 273 | S | A | 0.0653 | |
| 274 | P | A | 0.3212 | |
| 275 | Y | A | 0.8390 | |
| 276 | A | A | 0.5592 | |
| 277 | V | A | 1.3847 | |
| 278 | R | A | -0.1173 | |
| 279 | P | A | -0.4683 | |
| 280 | P | A | -0.7609 | |
| 281 | R | A | -0.9758 | |
| 282 | D | A | -1.1171 | |
| 283 | Y | A | 0.7300 | |
| 284 | F | A | 0.6407 | |
| 285 | G | A | 0.2120 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9575 | |
| 291 | L | A | 1.6285 | |
| 292 | V | A | 0.6357 | |
| 293 | S | A | -0.1623 | |
| 294 | S | A | -0.9645 | |
| 295 | D | A | -1.8427 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0964 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6260 | |
| 301 | R | A | -1.8373 | |
| 302 | P | A | -0.9463 | |
| 303 | F | A | -0.1971 | |
| 304 | W | A | -0.5725 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0908 | |
| 307 | R | A | -2.8289 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.3743 | |
| 310 | G | A | -1.2194 | |
| 311 | N | A | -1.2557 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7848 | |
| 319 | N | A | -0.8376 | |
| 320 | E | A | -1.0293 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3469 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0648 | |
| 333 | N | A | 0.5874 | |
| 334 | F | A | 1.8169 | |
| 335 | T | A | 0.9015 | |
| 336 | I | A | 0.4693 | |
| 337 | S | A | -0.8183 | |
| 338 | Q | A | -1.4782 | |
| 339 | Q | A | -0.8320 | |
| 340 | L | A | 0.8114 | |
| 341 | C | A | 0.4305 | |
| 342 | T | A | 0.1566 | |
| 343 | P | A | -0.2710 | |
| 344 | A | A | 0.1923 | |
| 345 | P | A | 0.1705 | |
| 346 | N | A | -0.2774 | |
| 347 | V | A | 1.5465 | |
| 348 | Y | A | 1.4427 | |
| 349 | D | A | 0.0539 | |
| 350 | P | A | -0.3276 | |
| 351 | S | A | -0.2595 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5378 | |
| 354 | K | A | -1.6417 | |
| 355 | N | A | -1.6930 | |
| 356 | Y | A | -0.0783 | |
| 357 | L | A | 0.6567 | |
| 358 | R | A | 0.9916 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3972 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0794 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0245 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6807 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2714 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3027 | |
| 376 | L | A | -1.6971 | |
| 377 | D | A | -1.9550 | |
| 378 | P | A | -1.0204 | |
| 379 | G | A | -1.0041 | |
| 380 | V | A | -0.9259 | |
| 381 | L | A | -0.5260 | |
| 382 | A | A | -0.6536 | |
| 383 | H | A | -0.8058 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4199 | |
| 386 | T | A | -0.5546 | |
| 387 | M | A | -0.2998 | |
| 388 | N | A | -0.8690 | |
| 389 | P | A | -1.2415 | |
| 390 | T | A | -1.4225 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4274 | |
| 393 | E | A | -2.7572 | |
| 394 | N | A | -2.2953 | |
| 395 | W | A | -1.3499 | |
| 396 | N | A | -1.1364 | |
| 397 | L | A | -0.2059 | |
| 398 | G | A | 0.5064 | |
| 399 | F | A | 2.4119 | |
| 400 | V | A | 1.8297 | |
| 401 | P | A | 0.0430 | |
| 402 | P | A | -1.7892 | |
| 403 | K | A | -3.2961 | |
| 404 | E | A | -3.7388 | |
| 405 | R | A | -3.8312 | |
| 406 | E | A | -3.7519 | |
| 407 | D | A | -2.8559 | |
| 408 | P | A | -1.7564 | |
| 409 | Y | A | -0.9851 | |
| 410 | K | A | -2.1175 | |
| 411 | G | A | -0.6372 | |
| 412 | L | A | 0.6791 | |
| 413 | I | A | 1.5876 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4055 | |
| 416 | E | A | -1.7084 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9561 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0510 | |
| 421 | E | A | -2.7890 | |
| 422 | R | A | -2.6515 | |
| 423 | F | A | -1.3285 | |
| 424 | S | A | -1.4786 | |
| 425 | Q | A | -1.8770 | |
| 426 | D | A | -2.9068 | |
| 427 | L | A | -1.9886 | |
| 428 | D | A | -2.7748 | |
| 429 | Q | A | -2.6168 | |
| 430 | F | A | -1.4159 | |
| 431 | A | A | -0.8883 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5556 | |
| 435 | K | A | -0.6930 | |
| 436 | F | A | 0.1530 | |
| 437 | L | A | 1.0380 | |
| 438 | Y | A | 0.8331 | |
| 439 | Q | A | -0.2700 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine