| Chain sequence(s) |
A: DIVLNQSPALMSASPGEKVTMTCSASSSVSYMYWYQQKPRSSPKPIIYLTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCQQWISNPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
B: EVQLQQSGPDLVKPGASVKISCKASGYSFTGYYMHWVKQSHGKSLEWIGRVNPNNGGTDYNQKFKGKAILTVDKSSTSAYMELRSLTPEDSEVYYCARGDFALVYWGQGTLVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:17)
[INFO] Main: Simulation completed successfully. (00:04:20)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -1.4393 | |
| 2 | I | A | 0.0882 | |
| 3 | V | A | 0.9705 | |
| 4 | L | A | 0.0000 | |
| 5 | N | A | -1.0702 | |
| 6 | Q | A | 0.0000 | |
| 7 | S | A | -0.3970 | |
| 8 | P | A | 0.0168 | |
| 9 | A | A | 0.2455 | |
| 10 | L | A | 1.1724 | |
| 11 | M | A | 0.5235 | |
| 12 | S | A | -0.3516 | |
| 13 | A | A | 0.0000 | |
| 14 | S | A | -1.7761 | |
| 15 | P | A | -1.9170 | |
| 16 | G | A | -2.0826 | |
| 17 | E | A | -2.9088 | |
| 18 | K | A | -2.8242 | |
| 19 | V | A | 0.0000 | |
| 20 | T | A | -0.6373 | |
| 21 | M | A | 0.0000 | |
| 22 | T | A | -0.4580 | |
| 23 | C | A | 0.0000 | |
| 24 | S | A | -0.5838 | |
| 25 | A | A | 0.0000 | |
| 26 | S | A | -0.1660 | |
| 27 | S | A | -0.0746 | |
| 28 | S | A | -0.0948 | |
| 29 | V | A | 0.0000 | |
| 30 | S | A | 0.4844 | |
| 31 | Y | A | 1.3245 | |
| 32 | M | A | 0.0000 | |
| 33 | Y | A | 0.0000 | |
| 34 | W | A | 0.0000 | |
| 35 | Y | A | 0.0000 | |
| 36 | Q | A | 0.0000 | |
| 37 | Q | A | 0.0000 | |
| 38 | K | A | -1.6555 | |
| 39 | P | A | -1.7294 | |
| 40 | R | A | -2.4350 | |
| 41 | S | A | -1.6669 | |
| 42 | S | A | -1.1413 | |
| 43 | P | A | 0.0000 | |
| 44 | K | A | -0.9737 | |
| 45 | P | A | -0.1346 | |
| 46 | I | A | 0.0000 | |
| 47 | I | A | 0.0000 | |
| 48 | Y | A | 1.2369 | |
| 49 | L | A | 1.2772 | |
| 50 | T | A | 0.0000 | |
| 51 | S | A | -0.0687 | |
| 52 | N | A | -0.1745 | |
| 53 | L | A | 0.2610 | |
| 54 | A | A | 0.0984 | |
| 55 | S | A | -0.2360 | |
| 56 | G | A | -0.4092 | |
| 57 | V | A | -0.1976 | |
| 58 | P | A | -0.1630 | |
| 59 | A | A | -0.1441 | |
| 60 | R | A | -0.7419 | |
| 61 | F | A | 0.0000 | |
| 62 | S | A | -0.3691 | |
| 63 | G | A | -0.2544 | |
| 64 | S | A | -0.4560 | |
| 65 | G | A | -0.5834 | |
| 66 | S | A | -0.4467 | |
| 67 | G | A | -0.4198 | |
| 68 | T | A | -0.4291 | |
| 69 | S | A | -0.6458 | |
| 70 | Y | A | 0.0000 | |
| 71 | S | A | -0.3747 | |
| 72 | L | A | 0.0000 | |
| 73 | T | A | -0.5992 | |
| 74 | I | A | 0.0000 | |
| 75 | S | A | -1.5768 | |
| 76 | S | A | -1.9560 | |
| 77 | M | A | 0.0000 | |
| 78 | E | A | -2.4086 | |
| 79 | A | A | -2.1663 | |
| 80 | E | A | -2.3241 | |
| 81 | D | A | 0.0000 | |
| 82 | A | A | 0.0000 | |
| 83 | A | A | 0.0000 | |
| 84 | T | A | -0.6759 | |
| 85 | Y | A | 0.0000 | |
| 86 | Y | A | 0.0000 | |
| 87 | C | A | 0.0000 | |
| 88 | Q | A | 0.0000 | |
| 89 | Q | A | 0.0000 | |
| 90 | W | A | 1.1066 | |
| 91 | I | A | 1.5616 | |
| 92 | S | A | -0.0352 | |
| 93 | N | A | -1.2794 | |
| 94 | P | A | -1.1895 | |
| 95 | Y | A | 0.1500 | |
| 96 | T | A | 0.0250 | |
| 97 | F | A | 0.0000 | |
| 98 | G | A | 0.0000 | |
| 99 | G | A | -1.1031 | |
| 100 | G | A | -0.8507 | |
| 101 | T | A | 0.0000 | |
| 102 | K | A | -0.7049 | |
| 103 | L | A | 0.0000 | |
| 104 | E | A | -0.7932 | |
| 105 | I | A | 0.0000 | |
| 106 | K | A | -1.8258 | |
| 107 | R | A | -1.6809 | |
| 108 | A | A | -1.3446 | |
| 109 | D | A | -2.4520 | |
| 110 | A | A | -1.3886 | |
| 111 | A | A | -0.6854 | |
| 112 | P | A | 0.0000 | |
| 113 | T | A | -0.1197 | |
| 114 | V | A | 0.0000 | |
| 115 | S | A | -0.0471 | |
| 116 | I | A | 0.0482 | |
| 117 | F | A | 0.0000 | |
| 118 | P | A | 0.0000 | |
| 119 | P | A | 0.0000 | |
| 120 | S | A | 0.0000 | |
| 121 | S | A | -0.8930 | |
| 122 | E | A | -1.0296 | |
| 123 | Q | A | 0.0000 | |
| 124 | L | A | -0.7823 | |
| 125 | T | A | -0.6390 | |
| 126 | S | A | -0.7061 | |
| 127 | G | A | -1.1145 | |
| 128 | G | A | -1.0123 | |
| 129 | A | A | 0.0000 | |
| 130 | S | A | 0.0000 | |
| 131 | V | A | 0.0000 | |
| 132 | V | A | 0.0000 | |
| 133 | C | A | 0.0000 | |
| 134 | F | A | 0.0000 | |
| 135 | L | A | 0.0000 | |
| 136 | N | A | 0.0000 | |
| 137 | N | A | -0.7936 | |
| 138 | F | A | 0.0000 | |
| 139 | Y | A | 0.0000 | |
| 140 | P | A | -2.2267 | |
| 141 | K | A | -2.7811 | |
| 142 | D | A | -2.9029 | |
| 143 | I | A | -1.8478 | |
| 144 | N | A | -2.0073 | |
| 145 | V | A | -0.7969 | |
| 146 | K | A | -1.7992 | |
| 147 | W | A | 0.0000 | |
| 148 | K | A | -2.3311 | |
| 149 | I | A | 0.0000 | |
| 150 | D | A | -2.6555 | |
| 151 | G | A | -1.9529 | |
| 152 | S | A | -2.1282 | |
| 153 | E | A | -3.1942 | |
| 154 | R | A | -2.6727 | |
| 155 | Q | A | -2.5250 | |
| 156 | N | A | -2.0524 | |
| 157 | G | A | -0.8542 | |
| 158 | V | A | -0.5369 | |
| 159 | L | A | -0.1072 | |
| 160 | N | A | 0.0812 | |
| 161 | S | A | 0.0000 | |
| 162 | W | A | 0.4728 | |
| 163 | T | A | -0.4167 | |
| 164 | D | A | -1.5611 | |
| 165 | Q | A | 0.0000 | |
| 166 | D | A | -1.9157 | |
| 167 | S | A | -2.1398 | |
| 168 | K | A | -2.4673 | |
| 169 | D | A | -1.7892 | |
| 170 | S | A | 0.0000 | |
| 171 | T | A | 0.0000 | |
| 172 | Y | A | -0.9698 | |
| 173 | S | A | 0.0000 | |
| 174 | M | A | 0.0000 | |
| 175 | S | A | 0.0000 | |
| 176 | S | A | 0.0000 | |
| 177 | T | A | 0.0000 | |
| 178 | L | A | 0.0000 | |
| 179 | T | A | -0.2783 | |
| 180 | L | A | 0.0000 | |
| 181 | T | A | -1.5265 | |
| 182 | K | A | -2.6377 | |
| 183 | D | A | -3.4668 | |
| 184 | E | A | -2.7672 | |
| 185 | Y | A | 0.0000 | |
| 186 | E | A | -3.9652 | |
| 187 | R | A | -3.7903 | |
| 188 | H | A | -2.9336 | |
| 189 | N | A | -2.6107 | |
| 190 | S | A | -1.7310 | |
| 191 | Y | A | 0.0000 | |
| 192 | T | A | -1.0248 | |
| 193 | C | A | 0.0000 | |
| 194 | E | A | -0.5209 | |
| 195 | A | A | 0.0000 | |
| 196 | T | A | -1.0594 | |
| 197 | H | A | 0.0000 | |
| 198 | K | A | -2.6061 | |
| 199 | T | A | -1.3206 | |
| 200 | S | A | -0.7223 | |
| 201 | T | A | -0.5884 | |
| 202 | S | A | -0.3607 | |
| 203 | P | A | -0.3905 | |
| 204 | I | A | 0.5074 | |
| 205 | V | A | 0.5210 | |
| 206 | K | A | -0.2600 | |
| 207 | S | A | -0.3880 | |
| 208 | F | A | -0.8361 | |
| 209 | N | A | -1.8488 | |
| 210 | R | A | -2.2839 | |
| 211 | N | A | -2.5639 | |
| 212 | E | A | -2.2966 | |
| 213 | C | A | -0.9125 | |
| 1 | E | B | -2.1493 | |
| 2 | V | B | -1.1996 | |
| 3 | Q | B | -2.2235 | |
| 4 | L | B | 0.0000 | |
| 5 | Q | B | -2.3252 | |
| 6 | Q | B | 0.0000 | |
| 7 | S | B | -1.2173 | |
| 8 | G | B | -1.0618 | |
| 9 | P | B | -0.7543 | |
| 10 | D | B | -1.1948 | |
| 11 | L | B | -0.7676 | |
| 12 | V | B | -1.0897 | |
| 13 | K | B | -2.0405 | |
| 14 | P | B | -1.6437 | |
| 15 | G | B | -1.4288 | |
| 16 | A | B | -1.2863 | |
| 17 | S | B | -1.6732 | |
| 18 | V | B | 0.0000 | |
| 19 | K | B | -1.7538 | |
| 20 | I | B | 0.0000 | |
| 21 | S | B | -0.9466 | |
| 22 | C | B | 0.0000 | |
| 23 | K | B | -2.3508 | |
| 24 | A | B | 0.0000 | |
| 25 | S | B | -1.6144 | |
| 26 | G | B | -1.3693 | |
| 27 | Y | B | -0.6175 | |
| 28 | S | B | -0.2676 | |
| 29 | F | B | 0.0000 | |
| 30 | T | B | -1.1292 | |
| 31 | G | B | -0.6779 | |
| 32 | Y | B | -0.0365 | |
| 33 | Y | B | -0.1354 | |
| 34 | M | B | 0.0000 | |
| 35 | H | B | 0.0000 | |
| 36 | W | B | 0.0000 | |
| 37 | V | B | 0.0000 | |
| 38 | K | B | -0.6306 | |
| 39 | Q | B | 0.0000 | |
| 40 | S | B | -1.5433 | |
| 41 | H | B | -1.7974 | |
| 42 | G | B | -2.0724 | |
| 43 | K | B | -2.5633 | |
| 44 | S | B | -1.5922 | |
| 45 | L | B | 0.0000 | |
| 46 | E | B | -0.7856 | |
| 47 | W | B | 0.0000 | |
| 48 | I | B | 0.0000 | |
| 49 | G | B | 0.0000 | |
| 50 | R | B | -0.3791 | |
| 51 | V | B | 0.0000 | |
| 52 | N | B | -1.1883 | |
| 53 | P | B | 0.0000 | |
| 54 | N | B | -2.4026 | |
| 55 | N | B | -2.3299 | |
| 56 | G | B | -1.6536 | |
| 57 | G | B | -1.2141 | |
| 58 | T | B | -0.6795 | |
| 59 | D | B | -1.2984 | |
| 60 | Y | B | -1.4275 | |
| 61 | N | B | 0.0000 | |
| 62 | Q | B | -2.9100 | |
| 63 | K | B | -2.8703 | |
| 64 | F | B | 0.0000 | |
| 65 | K | B | -2.8257 | |
| 66 | G | B | -2.0954 | |
| 67 | K | B | -2.0607 | |
| 68 | A | B | 0.0000 | |
| 69 | I | B | -0.2739 | |
| 70 | L | B | 0.0000 | |
| 71 | T | B | -0.3301 | |
| 72 | V | B | -1.1707 | |
| 73 | D | B | -1.8304 | |
| 74 | K | B | -2.4509 | |
| 75 | S | B | -1.2741 | |
| 76 | S | B | -1.3248 | |
| 77 | T | B | -1.4655 | |
| 78 | S | B | 0.0000 | |
| 79 | A | B | 0.0000 | |
| 80 | Y | B | -0.3675 | |
| 81 | M | B | 0.0000 | |
| 82 | E | B | -1.3317 | |
| 83 | L | B | 0.0000 | |
| 84 | R | B | -2.4478 | |
| 85 | S | B | -1.6729 | |
| 86 | L | B | 0.0000 | |
| 87 | T | B | -1.4680 | |
| 88 | P | B | -1.4715 | |
| 89 | E | B | -1.9833 | |
| 90 | D | B | 0.0000 | |
| 91 | S | B | -0.8109 | |
| 92 | E | B | 0.0000 | |
| 93 | V | B | -0.1437 | |
| 94 | Y | B | 0.0000 | |
| 95 | Y | B | 0.0000 | |
| 96 | C | B | 0.0000 | |
| 97 | A | B | 0.0000 | |
| 98 | R | B | 0.0000 | |
| 99 | G | B | 0.0000 | |
| 100 | D | B | -0.4922 | |
| 101 | F | B | 0.8918 | |
| 102 | A | B | 0.7831 | |
| 103 | L | B | 0.0000 | |
| 104 | V | B | 0.8848 | |
| 105 | Y | B | 0.4693 | |
| 106 | W | B | -0.2814 | |
| 107 | G | B | 0.0000 | |
| 108 | Q | B | -1.7607 | |
| 109 | G | B | -0.9265 | |
| 110 | T | B | 0.0000 | |
| 111 | L | B | -0.0896 | |
| 112 | V | B | 0.0000 | |
| 113 | T | B | -0.6718 | |
| 114 | V | B | 0.0000 | |
| 115 | S | B | -1.2341 | |
| 116 | S | B | -1.3729 | |
| 117 | A | B | -1.4848 | |
| 118 | K | B | -2.1166 | |
| 119 | T | B | -1.0793 | |
| 120 | T | B | -0.7356 | |
| 121 | P | B | -0.6884 | |
| 122 | P | B | -0.2678 | |
| 123 | S | B | -0.2011 | |
| 124 | V | B | -0.2472 | |
| 125 | Y | B | -0.3185 | |
| 126 | P | B | -0.4364 | |
| 127 | L | B | 0.0000 | |
| 128 | A | B | 0.0000 | |
| 129 | P | B | -0.1100 | |
| 130 | G | B | -0.7314 | |
| 131 | S | B | -0.7570 | |
| 132 | A | B | -0.3669 | |
| 133 | A | B | -0.5119 | |
| 134 | Q | B | -0.8872 | |
| 135 | T | B | -0.8823 | |
| 136 | N | B | -1.4245 | |
| 137 | S | B | -0.7592 | |
| 138 | M | B | -0.1880 | |
| 139 | V | B | 0.0000 | |
| 140 | T | B | 0.0000 | |
| 141 | L | B | 0.0000 | |
| 142 | G | B | 0.0000 | |
| 143 | C | B | 0.0000 | |
| 144 | L | B | 0.0000 | |
| 145 | V | B | 0.0000 | |
| 146 | K | B | -0.1348 | |
| 147 | G | B | -0.3394 | |
| 148 | Y | B | 0.0000 | |
| 149 | F | B | 0.0000 | |
| 150 | P | B | 0.0000 | |
| 151 | E | B | -0.2792 | |
| 152 | P | B | -0.4481 | |
| 153 | V | B | 0.0000 | |
| 154 | T | B | -0.2746 | |
| 155 | V | B | -0.2411 | |
| 156 | T | B | -0.3755 | |
| 157 | W | B | 0.0000 | |
| 158 | N | B | -0.9682 | |
| 159 | S | B | -0.7662 | |
| 160 | G | B | -0.5602 | |
| 161 | S | B | -0.4394 | |
| 162 | L | B | -0.1371 | |
| 163 | S | B | -0.3367 | |
| 164 | S | B | -0.4983 | |
| 165 | G | B | -0.2967 | |
| 166 | V | B | 0.1289 | |
| 167 | H | B | -0.0506 | |
| 168 | T | B | 0.1447 | |
| 169 | F | B | 0.0000 | |
| 170 | P | B | 0.1238 | |
| 171 | A | B | 0.3582 | |
| 172 | V | B | 0.4775 | |
| 173 | L | B | 0.3288 | |
| 174 | Q | B | -1.0620 | |
| 175 | S | B | -1.2777 | |
| 176 | D | B | -1.9863 | |
| 177 | L | B | -0.7467 | |
| 178 | Y | B | 0.0507 | |
| 179 | T | B | 0.2009 | |
| 180 | L | B | 0.0000 | |
| 181 | S | B | 0.0000 | |
| 182 | S | B | 0.0000 | |
| 183 | S | B | 0.0000 | |
| 184 | V | B | 0.0000 | |
| 185 | T | B | 0.0356 | |
| 186 | V | B | 0.0000 | |
| 187 | P | B | -0.2901 | |
| 188 | S | B | -0.7314 | |
| 189 | S | B | -0.7351 | |
| 190 | T | B | -0.8801 | |
| 191 | W | B | 0.0000 | |
| 192 | P | B | -0.7167 | |
| 193 | S | B | -1.2876 | |
| 194 | E | B | -2.0680 | |
| 195 | T | B | -1.1156 | |
| 196 | V | B | 0.0000 | |
| 197 | T | B | -1.2676 | |
| 198 | C | B | 0.0000 | |
| 199 | N | B | -1.3493 | |
| 200 | V | B | 0.0000 | |
| 201 | A | B | -0.9170 | |
| 202 | H | B | 0.0000 | |
| 203 | P | B | -0.9243 | |
| 204 | A | B | -0.5319 | |
| 205 | S | B | -0.5181 | |
| 206 | S | B | -0.7530 | |
| 207 | T | B | -0.8943 | |
| 208 | K | B | -1.8664 | |
| 209 | V | B | -1.2166 | |
| 210 | D | B | -2.3807 | |
| 211 | K | B | -1.5143 | |
| 212 | K | B | -1.5685 | |
| 213 | I | B | 0.0000 | |
| 214 | V | B | 0.7396 | |
| 215 | P | B | -0.2712 | |
| 216 | R | B | -0.9780 | |
| 217 | D | B | -1.4989 | |
| 218 | C | B | -0.6828 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine