| Chain sequence(s) |
A: DVQLVESGGGVVQPGGSLRLSCAASGRTFSSIYAKGWFRQAPGKEREFVAAISRSGRSTSYADSVKGRFTISRDNSKNTVYLQMNSLRPEDTALYYCAAVGGATTVTASEWDYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:53)
[INFO] Main: Simulation completed successfully. (00:00:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -2.2254 | |
| 2 | V | A | -1.6676 | |
| 3 | Q | A | -1.1941 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 1.1885 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.1817 | |
| 8 | G | A | -0.7475 | |
| 9 | G | A | 0.1807 | |
| 10 | G | A | 0.7831 | |
| 11 | V | A | 1.5559 | |
| 12 | V | A | 0.0000 | |
| 13 | Q | A | -1.4658 | |
| 14 | P | A | -1.7320 | |
| 15 | G | A | -1.4876 | |
| 16 | G | A | -0.9705 | |
| 17 | S | A | -1.1365 | |
| 18 | L | A | -0.9701 | |
| 19 | R | A | -2.2874 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4164 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.0487 | |
| 24 | A | A | -0.5503 | |
| 25 | S | A | -1.2767 | |
| 26 | G | A | -1.8014 | |
| 27 | R | A | -2.1769 | |
| 28 | T | A | -0.8574 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -1.1792 | |
| 31 | S | A | -0.4600 | |
| 32 | I | A | 0.2498 | |
| 33 | Y | A | -0.0962 | |
| 34 | A | A | 0.0000 | |
| 35 | K | A | 0.0000 | |
| 36 | G | A | 0.0000 | |
| 37 | W | A | 0.0000 | |
| 38 | F | A | 0.0000 | |
| 39 | R | A | 0.0000 | |
| 40 | Q | A | -1.7963 | |
| 41 | A | A | -1.6326 | |
| 42 | P | A | -1.3836 | |
| 43 | G | A | -1.9340 | |
| 44 | K | A | -3.3295 | |
| 45 | E | A | -3.4947 | |
| 46 | R | A | -2.6424 | |
| 47 | E | A | -1.9668 | |
| 48 | F | A | -0.4005 | |
| 49 | V | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | A | A | 0.0000 | |
| 52 | I | A | 0.0000 | |
| 53 | S | A | -1.1806 | |
| 54 | R | A | -1.4982 | |
| 55 | S | A | -1.5393 | |
| 56 | G | A | -1.8252 | |
| 57 | R | A | -2.3324 | |
| 58 | S | A | -1.4299 | |
| 59 | T | A | -0.7500 | |
| 60 | S | A | -0.3116 | |
| 61 | Y | A | -0.6650 | |
| 62 | A | A | -1.1396 | |
| 63 | D | A | -2.4472 | |
| 64 | S | A | -1.7634 | |
| 65 | V | A | 0.0000 | |
| 66 | K | A | -2.5373 | |
| 67 | G | A | -1.6247 | |
| 68 | R | A | 0.0000 | |
| 69 | F | A | 0.0000 | |
| 70 | T | A | -0.9611 | |
| 71 | I | A | 0.0000 | |
| 72 | S | A | -0.7819 | |
| 73 | R | A | -1.4242 | |
| 74 | D | A | -1.7330 | |
| 75 | N | A | -1.9550 | |
| 76 | S | A | -1.6314 | |
| 77 | K | A | -2.3756 | |
| 78 | N | A | -1.9517 | |
| 79 | T | A | 0.0000 | |
| 80 | V | A | 0.0000 | |
| 81 | Y | A | -0.7517 | |
| 82 | L | A | 0.0000 | |
| 83 | Q | A | -1.6350 | |
| 84 | M | A | 0.0000 | |
| 85 | N | A | -1.3565 | |
| 86 | S | A | -1.1872 | |
| 87 | L | A | 0.0000 | |
| 88 | R | A | -2.6620 | |
| 89 | P | A | -2.1593 | |
| 90 | E | A | -2.4795 | |
| 91 | D | A | 0.0000 | |
| 92 | T | A | -0.5030 | |
| 93 | A | A | 0.0000 | |
| 94 | L | A | 0.6063 | |
| 95 | Y | A | 0.0000 | |
| 96 | Y | A | 0.0000 | |
| 97 | C | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | V | A | 0.0000 | |
| 101 | G | A | -0.4028 | |
| 102 | G | A | -0.6434 | |
| 103 | A | A | -0.2348 | |
| 104 | T | A | -0.1154 | |
| 105 | T | A | 0.4188 | |
| 106 | V | A | 1.2916 | |
| 107 | T | A | -0.0347 | |
| 108 | A | A | -0.9561 | |
| 109 | S | A | -1.2322 | |
| 110 | E | A | -2.0674 | |
| 111 | W | A | 0.0000 | |
| 112 | D | A | -2.0042 | |
| 113 | Y | A | -0.9085 | |
| 114 | W | A | -0.1205 | |
| 115 | G | A | -0.0860 | |
| 116 | Q | A | -0.8921 | |
| 117 | G | A | 0.0314 | |
| 118 | T | A | 0.6035 | |
| 119 | L | A | 1.7366 | |
| 120 | V | A | 0.0000 | |
| 121 | T | A | 0.3269 | |
| 122 | V | A | 0.0000 | |
| 123 | S | A | -0.8367 | |
| 124 | S | A | -0.5369 |