Project name: model1pv

Status: done

Started: 2026-04-28 08:38:29
Settings
Chain sequence(s) A: MIDVSKFSIQERQVLVYEIMREVEENPHDPRLKGVSWYMLDRMMMYPEDEENIKRLEELLNG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:20)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:21)
Show buried residues

Minimal score value
-4.0043
Maximal score value
1.0747
Average score
-1.3238
Total score value
-82.0753

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.5949
2 I A -0.1240
3 D A -1.7069
4 V A 0.0000
5 S A -1.8923
6 K A -1.9169
7 F A -1.2607
8 S A -0.9282
9 I A -0.4232
10 Q A -1.1216
11 E A -1.3840
12 R A 0.0000
13 Q A 0.1262
14 V A 0.8789
15 L A 0.1895
16 V A 0.0000
17 Y A 0.0477
18 E A -1.4896
19 I A 0.0000
20 M A -1.4658
21 R A -3.2267
22 E A -3.0721
23 V A -2.8731
24 E A -3.8658
25 E A -3.8180
26 N A -3.1687
27 P A -2.5722
28 H A -2.4504
29 D A -2.3357
30 P A -2.2254
31 R A -2.6953
32 L A -2.1366
33 K A -2.6866
34 G A -1.3555
35 V A -0.3976
36 S A 0.2841
37 W A 0.9867
38 Y A 1.0747
39 M A 0.2539
40 L A 0.0000
41 D A -0.5278
42 R A -0.5418
43 M A 0.0000
44 M A 0.4656
45 M A 0.4388
46 Y A 0.0447
47 P A -1.2324
48 E A -2.2385
49 D A -3.1601
50 E A -4.0043
51 E A -3.8852
52 N A 0.0000
53 I A -3.2449
54 K A -3.9556
55 R A -2.8802
56 L A 0.0000
57 E A -2.3180
58 E A -2.6665
59 L A -1.4187
60 L A -0.7779
61 N A -0.7800
62 G A -1.2362
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Laboratory of Theory of Biopolymers 2018