| Chain sequence(s) |
A: MIDVSKFSIQERQVLVYEIMREVEENPHDPRLKGVSWYMLDRMMMYPEDEENIKRLEELLNG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:20)
[INFO] Main: Simulation completed successfully. (00:02:21)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5949 | |
| 2 | I | A | -0.1240 | |
| 3 | D | A | -1.7069 | |
| 4 | V | A | 0.0000 | |
| 5 | S | A | -1.8923 | |
| 6 | K | A | -1.9169 | |
| 7 | F | A | -1.2607 | |
| 8 | S | A | -0.9282 | |
| 9 | I | A | -0.4232 | |
| 10 | Q | A | -1.1216 | |
| 11 | E | A | -1.3840 | |
| 12 | R | A | 0.0000 | |
| 13 | Q | A | 0.1262 | |
| 14 | V | A | 0.8789 | |
| 15 | L | A | 0.1895 | |
| 16 | V | A | 0.0000 | |
| 17 | Y | A | 0.0477 | |
| 18 | E | A | -1.4896 | |
| 19 | I | A | 0.0000 | |
| 20 | M | A | -1.4658 | |
| 21 | R | A | -3.2267 | |
| 22 | E | A | -3.0721 | |
| 23 | V | A | -2.8731 | |
| 24 | E | A | -3.8658 | |
| 25 | E | A | -3.8180 | |
| 26 | N | A | -3.1687 | |
| 27 | P | A | -2.5722 | |
| 28 | H | A | -2.4504 | |
| 29 | D | A | -2.3357 | |
| 30 | P | A | -2.2254 | |
| 31 | R | A | -2.6953 | |
| 32 | L | A | -2.1366 | |
| 33 | K | A | -2.6866 | |
| 34 | G | A | -1.3555 | |
| 35 | V | A | -0.3976 | |
| 36 | S | A | 0.2841 | |
| 37 | W | A | 0.9867 | |
| 38 | Y | A | 1.0747 | |
| 39 | M | A | 0.2539 | |
| 40 | L | A | 0.0000 | |
| 41 | D | A | -0.5278 | |
| 42 | R | A | -0.5418 | |
| 43 | M | A | 0.0000 | |
| 44 | M | A | 0.4656 | |
| 45 | M | A | 0.4388 | |
| 46 | Y | A | 0.0447 | |
| 47 | P | A | -1.2324 | |
| 48 | E | A | -2.2385 | |
| 49 | D | A | -3.1601 | |
| 50 | E | A | -4.0043 | |
| 51 | E | A | -3.8852 | |
| 52 | N | A | 0.0000 | |
| 53 | I | A | -3.2449 | |
| 54 | K | A | -3.9556 | |
| 55 | R | A | -2.8802 | |
| 56 | L | A | 0.0000 | |
| 57 | E | A | -2.3180 | |
| 58 | E | A | -2.6665 | |
| 59 | L | A | -1.4187 | |
| 60 | L | A | -0.7779 | |
| 61 | N | A | -0.7800 | |
| 62 | G | A | -1.2362 |