Project name: 36_rank

Status: done

Started: 2026-05-18 11:32:06
Settings
Chain sequence(s) B: MWSPEELKQYIEDIKKWAPEEIAKLEQQAKDGTQTPHMAKSLIEWVKEEAEKYLKRAKEELEKVES
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:09)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:09)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:09)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:09)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:09)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:22)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:23)
Show buried residues

Minimal score value
-4.5758
Maximal score value
1.3875
Average score
-2.2557
Total score value
-148.8744

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M B 1.3875
2 W B 0.5569
3 S B -0.9202
4 P B -2.6291
5 E B -3.3526
6 E B -3.2051
7 L B 0.0000
8 K B -3.7674
9 Q B -3.4605
10 Y B -2.2643
11 I B 0.0000
12 E B -3.3459
13 D B -2.9691
14 I B 0.0000
15 K B -3.6920
16 K B -3.5792
17 W B -2.3128
18 A B -2.6473
19 P B -2.3375
20 E B -3.2328
21 E B -2.5681
22 I B -2.2502
23 A B -2.3692
24 K B -3.4213
25 L B 0.0000
26 E B -4.0548
27 Q B -3.6307
28 Q B -3.2739
29 A B -3.3847
30 K B -3.8775
31 D B -3.5244
32 G B -2.2756
33 T B -1.8641
34 Q B -1.8800
35 T B -1.5040
36 P B -2.1564
37 H B -1.4494
38 M B -0.6659
39 A B 0.0000
40 K B -2.3677
41 S B -1.0123
42 L B -0.6830
43 I B 0.0000
44 E B -2.0916
45 W B -0.8069
46 V B 0.0000
47 K B -3.4244
48 E B -3.6015
49 E B -2.7654
50 A B 0.0000
51 E B -4.4074
52 K B -4.0910
53 Y B -2.6796
54 L B -3.3337
55 K B -4.3997
56 R B -4.2541
57 A B 0.0000
58 K B -4.3001
59 E B -4.5758
60 E B 0.0000
61 L B 0.0000
62 E B -4.1650
63 K B -3.3888
64 V B -1.7250
65 E B -2.8748
66 S B -2.0050
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Laboratory of Theory of Biopolymers 2018