| Chain sequence(s) |
A: PYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:00)
[INFO] Main: Simulation completed successfully. (00:00:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | P | A | -1.1013 | |
| 2 | Y | A | 0.0000 | |
| 3 | N | A | -2.5279 | |
| 4 | K | A | -2.7390 | |
| 5 | I | A | -2.0824 | |
| 6 | N | A | -2.6232 | |
| 7 | Q | A | -2.5735 | |
| 8 | R | A | -1.7316 | |
| 9 | I | A | 1.3295 | |
| 10 | L | A | 2.1517 | |
| 11 | V | A | 2.3242 | |
| 12 | V | A | 1.4247 | |
| 13 | D | A | 0.5905 | |
| 14 | P | A | 0.6223 | |
| 15 | V | A | 1.4985 | |
| 16 | T | A | 0.4007 | |
| 17 | S | A | 0.0163 | |
| 18 | E | A | -0.4560 | |
| 19 | H | A | 0.1828 | |
| 20 | E | A | -0.1048 | |
| 21 | L | A | 0.0000 | |
| 22 | T | A | 0.0000 | |
| 23 | C | A | 0.0000 | |
| 24 | Q | A | -1.4029 | |
| 25 | A | A | 0.0000 | |
| 26 | E | A | -1.4354 | |
| 27 | G | A | 0.0000 | |
| 28 | Y | A | 0.4595 | |
| 29 | P | A | -0.3337 | |
| 30 | K | A | -1.5868 | |
| 31 | A | A | 0.0000 | |
| 32 | E | A | -1.4801 | |
| 33 | V | A | -0.7662 | |
| 34 | I | A | 0.2869 | |
| 35 | W | A | 0.0000 | |
| 36 | T | A | -0.2489 | |
| 37 | S | A | -1.1259 | |
| 38 | S | A | -1.6360 | |
| 39 | D | A | -2.4545 | |
| 40 | H | A | -1.9944 | |
| 41 | Q | A | -1.3274 | |
| 42 | V | A | 0.9182 | |
| 43 | L | A | 0.3478 | |
| 44 | S | A | -0.3033 | |
| 45 | G | A | -1.1403 | |
| 46 | K | A | -2.0647 | |
| 47 | T | A | -1.1161 | |
| 48 | T | A | -0.7008 | |
| 49 | T | A | -0.8894 | |
| 50 | T | A | -1.3087 | |
| 51 | N | A | -3.1378 | |
| 52 | S | A | 0.0000 | |
| 53 | K | A | -3.9323 | |
| 54 | R | A | -4.1748 | |
| 55 | E | A | -4.3711 | |
| 56 | E | A | -4.4118 | |
| 57 | K | A | -3.2440 | |
| 58 | L | A | -2.1084 | |
| 59 | F | A | -1.7138 | |
| 60 | N | A | -1.7346 | |
| 61 | V | A | 0.0000 | |
| 62 | T | A | -0.7970 | |
| 63 | S | A | 0.0000 | |
| 64 | T | A | -1.3605 | |
| 65 | L | A | 0.0000 | |
| 66 | R | A | -1.9856 | |
| 67 | I | A | -1.1814 | |
| 68 | N | A | -1.4255 | |
| 69 | T | A | 0.0000 | |
| 70 | T | A | -0.8059 | |
| 71 | T | A | -0.7024 | |
| 72 | N | A | -1.2014 | |
| 73 | E | A | -1.0973 | |
| 74 | I | A | -0.2740 | |
| 75 | F | A | 0.0000 | |
| 76 | Y | A | 0.1644 | |
| 77 | C | A | 0.0000 | |
| 78 | T | A | -0.6661 | |
| 79 | F | A | 0.0000 | |
| 80 | R | A | -1.8505 | |
| 81 | R | A | -1.7181 | |
| 82 | L | A | -1.1162 | |
| 83 | D | A | -1.9365 | |
| 84 | P | A | -1.9633 | |
| 85 | E | A | -2.5611 | |
| 86 | E | A | -2.2916 | |
| 87 | N | A | -2.3321 | |
| 88 | H | A | -1.6980 | |
| 89 | T | A | -1.0809 | |
| 90 | A | A | -1.3769 | |
| 91 | E | A | -1.0233 | |
| 92 | L | A | 0.0000 | |
| 93 | V | A | 1.0242 |