Project name: 17_rank

Status: done

Started: 2026-04-29 08:05:21
Settings
Chain sequence(s) B: NIKEEAEKEMEKVVAEAQKRYEEAKSLDEREARSERHRAWNDVMNQTFIATQLTGEERRIPAI
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:08)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:09)
Show buried residues

Minimal score value
-4.6916
Maximal score value
1.5344
Average score
-2.2278
Total score value
-140.3539

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 N B -2.3594
2 I B -1.4246
3 K B -3.2152
4 E B -4.1044
5 E B -3.7305
6 A B 0.0000
7 E B -4.0797
8 K B -4.3969
9 E B -3.5059
10 M B 0.0000
11 E B -3.6525
12 K B -3.4513
13 V B -2.6220
14 V B -1.8540
15 A B -2.0381
16 E B -2.8245
17 A B 0.0000
18 Q B -2.4393
19 K B -3.7602
20 R B -3.8877
21 Y B -3.6995
22 E B -4.1156
23 E B -4.1041
24 A B 0.0000
25 K B -3.7555
26 S B -2.1821
27 L B -2.5300
28 D B -3.4127
29 E B -4.2917
30 R B -4.3018
31 E B -4.0178
32 A B -4.4926
33 R B -4.6916
34 S B -3.6846
35 E B -3.9896
36 R B -4.2510
37 H B -3.3802
38 R B -3.6950
39 A B 0.0000
40 W B -1.3830
41 N B -2.6624
42 D B -2.8093
43 V B 0.0000
44 M B -0.6640
45 N B -0.8270
46 Q B 0.0000
47 T B 0.0000
48 F B 1.3360
49 I B 1.5344
50 A B 0.0000
51 T B -1.1796
52 Q B -0.6815
53 L B 0.2157
54 T B -1.7192
55 G B -1.9468
56 E B -3.5298
57 E B -3.3457
58 R B -2.3265
59 R B -2.1647
60 I B -0.3612
61 P B -0.1972
62 A B 0.2774
63 I B 0.0221
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Laboratory of Theory of Biopolymers 2018