| Chain sequence(s) |
B: NIKEEAEKEMEKVVAEAQKRYEEAKSLDEREARSERHRAWNDVMNQTFIATQLTGEERRIPAI
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:08)
[INFO] Main: Simulation completed successfully. (00:02:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | N | B | -2.3594 | |
| 2 | I | B | -1.4246 | |
| 3 | K | B | -3.2152 | |
| 4 | E | B | -4.1044 | |
| 5 | E | B | -3.7305 | |
| 6 | A | B | 0.0000 | |
| 7 | E | B | -4.0797 | |
| 8 | K | B | -4.3969 | |
| 9 | E | B | -3.5059 | |
| 10 | M | B | 0.0000 | |
| 11 | E | B | -3.6525 | |
| 12 | K | B | -3.4513 | |
| 13 | V | B | -2.6220 | |
| 14 | V | B | -1.8540 | |
| 15 | A | B | -2.0381 | |
| 16 | E | B | -2.8245 | |
| 17 | A | B | 0.0000 | |
| 18 | Q | B | -2.4393 | |
| 19 | K | B | -3.7602 | |
| 20 | R | B | -3.8877 | |
| 21 | Y | B | -3.6995 | |
| 22 | E | B | -4.1156 | |
| 23 | E | B | -4.1041 | |
| 24 | A | B | 0.0000 | |
| 25 | K | B | -3.7555 | |
| 26 | S | B | -2.1821 | |
| 27 | L | B | -2.5300 | |
| 28 | D | B | -3.4127 | |
| 29 | E | B | -4.2917 | |
| 30 | R | B | -4.3018 | |
| 31 | E | B | -4.0178 | |
| 32 | A | B | -4.4926 | |
| 33 | R | B | -4.6916 | |
| 34 | S | B | -3.6846 | |
| 35 | E | B | -3.9896 | |
| 36 | R | B | -4.2510 | |
| 37 | H | B | -3.3802 | |
| 38 | R | B | -3.6950 | |
| 39 | A | B | 0.0000 | |
| 40 | W | B | -1.3830 | |
| 41 | N | B | -2.6624 | |
| 42 | D | B | -2.8093 | |
| 43 | V | B | 0.0000 | |
| 44 | M | B | -0.6640 | |
| 45 | N | B | -0.8270 | |
| 46 | Q | B | 0.0000 | |
| 47 | T | B | 0.0000 | |
| 48 | F | B | 1.3360 | |
| 49 | I | B | 1.5344 | |
| 50 | A | B | 0.0000 | |
| 51 | T | B | -1.1796 | |
| 52 | Q | B | -0.6815 | |
| 53 | L | B | 0.2157 | |
| 54 | T | B | -1.7192 | |
| 55 | G | B | -1.9468 | |
| 56 | E | B | -3.5298 | |
| 57 | E | B | -3.3457 | |
| 58 | R | B | -2.3265 | |
| 59 | R | B | -2.1647 | |
| 60 | I | B | -0.3612 | |
| 61 | P | B | -0.1972 | |
| 62 | A | B | 0.2774 | |
| 63 | I | B | 0.0221 |