| Chain sequence(s) |
A: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVG
C: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVG B: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVG E: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVG D: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVG G: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVG F: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVG I: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVG H: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVG K: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVG J: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVG L: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVG input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:14:34)
[INFO] Main: Simulation completed successfully. (00:14:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -3.0636 | |
| 2 | A | A | -2.3113 | |
| 3 | E | A | -3.1521 | |
| 4 | F | A | 0.0000 | |
| 5 | R | A | -3.3042 | |
| 6 | H | A | -2.0651 | |
| 7 | D | A | -2.8381 | |
| 8 | S | A | -1.1199 | |
| 9 | G | A | -0.0065 | |
| 10 | Y | A | 1.7742 | |
| 11 | E | A | 1.2422 | |
| 12 | V | A | 1.5255 | |
| 13 | H | A | -0.7243 | |
| 14 | H | A | -1.8992 | |
| 15 | Q | A | -1.7613 | |
| 16 | K | A | -0.4293 | |
| 17 | L | A | 1.5564 | |
| 18 | V | A | 1.5147 | |
| 19 | F | A | 1.6498 | |
| 20 | F | A | 0.8840 | |
| 21 | A | A | -0.0277 | |
| 22 | E | A | -1.5988 | |
| 23 | D | A | 0.0000 | |
| 24 | V | A | 0.0389 | |
| 25 | G | A | -0.7238 | |
| 26 | S | A | -1.1949 | |
| 27 | N | A | -1.2856 | |
| 28 | K | A | -2.2171 | |
| 29 | G | A | -1.1634 | |
| 30 | A | A | -0.2332 | |
| 31 | I | A | 1.3540 | |
| 32 | I | A | 1.5468 | |
| 33 | G | A | 1.1649 | |
| 34 | L | A | 1.5719 | |
| 35 | M | A | 1.0303 | |
| 36 | V | A | 1.2597 | |
| 37 | G | A | -0.2676 | |
| 1 | D | B | -3.0028 | |
| 2 | A | B | -2.2795 | |
| 3 | E | B | -3.0432 | |
| 4 | F | B | 0.0000 | |
| 5 | R | B | -2.5043 | |
| 6 | H | B | -1.6813 | |
| 7 | D | B | -2.6259 | |
| 8 | S | B | -1.0049 | |
| 9 | G | B | 0.0401 | |
| 10 | Y | B | 1.8336 | |
| 11 | E | B | 1.3126 | |
| 12 | V | B | 1.6754 | |
| 13 | H | B | -0.4675 | |
| 14 | H | B | -1.6354 | |
| 15 | Q | B | -1.2997 | |
| 16 | K | B | -0.5065 | |
| 17 | L | B | 0.7075 | |
| 18 | V | B | 0.8243 | |
| 19 | F | B | 0.9666 | |
| 20 | F | B | 0.5749 | |
| 21 | A | B | -0.2811 | |
| 22 | E | B | -1.7558 | |
| 23 | D | B | 0.0000 | |
| 24 | V | B | -0.3774 | |
| 25 | G | B | 0.0000 | |
| 26 | S | B | -1.1086 | |
| 27 | N | B | -0.9556 | |
| 28 | K | B | -2.0722 | |
| 29 | G | B | -1.1081 | |
| 30 | A | B | -0.2197 | |
| 31 | I | B | 1.2100 | |
| 32 | I | B | 1.1744 | |
| 33 | G | B | 0.8992 | |
| 34 | L | B | 1.3918 | |
| 35 | M | B | 1.0046 | |
| 36 | V | B | 1.3436 | |
| 37 | G | B | -0.1241 | |
| 1 | D | C | -2.9331 | |
| 2 | A | C | -2.4954 | |
| 3 | E | C | -3.0676 | |
| 4 | F | C | 0.0000 | |
| 5 | R | C | -2.9673 | |
| 6 | H | C | 0.0000 | |
| 7 | D | C | -2.1363 | |
| 8 | S | C | 0.0000 | |
| 9 | G | C | 0.1026 | |
| 10 | Y | C | 1.8319 | |
| 11 | E | C | 0.0000 | |
| 12 | V | C | 1.2687 | |
| 13 | H | C | 0.0000 | |
| 14 | H | C | -1.7968 | |
| 15 | Q | C | -1.1939 | |
| 16 | K | C | 0.0000 | |
| 17 | L | C | 0.0000 | |
| 18 | V | C | 0.0000 | |
| 19 | F | C | 0.0000 | |
| 20 | F | C | 0.0000 | |
| 21 | A | C | 0.0000 | |
| 22 | E | C | 0.0000 | |
| 23 | D | C | 0.0000 | |
| 24 | V | C | 0.0000 | |
| 25 | G | C | 0.0000 | |
| 26 | S | C | 0.0000 | |
| 27 | N | C | 0.0000 | |
| 28 | K | C | -1.3203 | |
| 29 | G | C | -0.7831 | |
| 30 | A | C | 0.0000 | |
| 31 | I | C | 1.1111 | |
| 32 | I | C | 0.0000 | |
| 33 | G | C | 0.0000 | |
| 34 | L | C | 1.3890 | |
| 35 | M | C | 0.0000 | |
| 36 | V | C | 0.9363 | |
| 37 | G | C | -0.3475 | |
| 1 | D | D | -2.9142 | |
| 2 | A | D | -2.5099 | |
| 3 | E | D | -2.9271 | |
| 4 | F | D | 0.0000 | |
| 5 | R | D | -2.7035 | |
| 6 | H | D | 0.0000 | |
| 7 | D | D | -2.0070 | |
| 8 | S | D | 0.0000 | |
| 9 | G | D | 0.1636 | |
| 10 | Y | D | 1.9774 | |
| 11 | E | D | 0.0000 | |
| 12 | V | D | 1.3854 | |
| 13 | H | D | 0.0000 | |
| 14 | H | D | -1.6139 | |
| 15 | Q | D | 0.0000 | |
| 16 | K | D | 0.0000 | |
| 17 | L | D | 0.0000 | |
| 18 | V | D | 0.0000 | |
| 19 | F | D | 0.0000 | |
| 20 | F | D | 0.0000 | |
| 21 | A | D | 0.0000 | |
| 22 | E | D | 0.0000 | |
| 23 | D | D | 0.0000 | |
| 24 | V | D | 0.0000 | |
| 25 | G | D | 0.0000 | |
| 26 | S | D | 0.0000 | |
| 27 | N | D | 0.0000 | |
| 28 | K | D | -1.1466 | |
| 29 | G | D | -0.7194 | |
| 30 | A | D | 0.0000 | |
| 31 | I | D | 1.0467 | |
| 32 | I | D | 0.0000 | |
| 33 | G | D | 0.0000 | |
| 34 | L | D | 1.3103 | |
| 35 | M | D | 0.0000 | |
| 36 | V | D | 0.9363 | |
| 37 | G | D | -0.2524 | |
| 1 | D | E | -2.7623 | |
| 2 | A | E | 0.0000 | |
| 3 | E | E | -2.4957 | |
| 4 | F | E | 0.0000 | |
| 5 | R | E | -2.3440 | |
| 6 | H | E | 0.0000 | |
| 7 | D | E | -1.5301 | |
| 8 | S | E | -0.2698 | |
| 9 | G | E | 0.3225 | |
| 10 | Y | E | 1.6488 | |
| 11 | E | E | 0.0000 | |
| 12 | V | E | 1.2478 | |
| 13 | H | E | 0.0000 | |
| 14 | H | E | -1.1264 | |
| 15 | Q | E | 0.0000 | |
| 16 | K | E | 0.0000 | |
| 17 | L | E | 0.0000 | |
| 18 | V | E | 0.0000 | |
| 19 | F | E | 0.0000 | |
| 20 | F | E | 0.0000 | |
| 21 | A | E | 0.0000 | |
| 22 | E | E | 0.0000 | |
| 23 | D | E | 0.0000 | |
| 24 | V | E | 0.0000 | |
| 25 | G | E | 0.0000 | |
| 26 | S | E | 0.0000 | |
| 27 | N | E | 0.0000 | |
| 28 | K | E | -0.7726 | |
| 29 | G | E | -0.4253 | |
| 30 | A | E | 0.0000 | |
| 31 | I | E | 0.7765 | |
| 32 | I | E | 0.0000 | |
| 33 | G | E | 0.0000 | |
| 34 | L | E | 0.9092 | |
| 35 | M | E | 0.0000 | |
| 36 | V | E | 0.7303 | |
| 37 | G | E | -0.5726 | |
| 1 | D | F | -3.0144 | |
| 2 | A | F | 0.0000 | |
| 3 | E | F | -2.9669 | |
| 4 | F | F | 0.0000 | |
| 5 | R | F | -2.2494 | |
| 6 | H | F | 0.0000 | |
| 7 | D | F | -1.4686 | |
| 8 | S | F | 0.0000 | |
| 9 | G | F | 0.2592 | |
| 10 | Y | F | 1.5648 | |
| 11 | E | F | 0.0000 | |
| 12 | V | F | 1.1500 | |
| 13 | H | F | 0.0000 | |
| 14 | H | F | -1.4570 | |
| 15 | Q | F | 0.0000 | |
| 16 | K | F | 0.0000 | |
| 17 | L | F | 0.0000 | |
| 18 | V | F | 0.0000 | |
| 19 | F | F | 0.0000 | |
| 20 | F | F | 0.0000 | |
| 21 | A | F | 0.0000 | |
| 22 | E | F | 0.0000 | |
| 23 | D | F | 0.0000 | |
| 24 | V | F | 0.0000 | |
| 25 | G | F | 0.0000 | |
| 26 | S | F | 0.0000 | |
| 27 | N | F | 0.0000 | |
| 28 | K | F | -0.6984 | |
| 29 | G | F | -0.3992 | |
| 30 | A | F | 0.0000 | |
| 31 | I | F | 0.7762 | |
| 32 | I | F | 0.0000 | |
| 33 | G | F | 0.0000 | |
| 34 | L | F | 0.9103 | |
| 35 | M | F | 0.0000 | |
| 36 | V | F | 0.7300 | |
| 37 | G | F | -0.5058 | |
| 1 | D | G | -2.9950 | |
| 2 | A | G | 0.0000 | |
| 3 | E | G | -2.9595 | |
| 4 | F | G | 0.0000 | |
| 5 | R | G | -1.9985 | |
| 6 | H | G | 0.0000 | |
| 7 | D | G | -1.4676 | |
| 8 | S | G | -0.3932 | |
| 9 | G | G | 0.2692 | |
| 10 | Y | G | 1.7111 | |
| 11 | E | G | 0.0000 | |
| 12 | V | G | 1.3033 | |
| 13 | H | G | 0.0000 | |
| 14 | H | G | -0.9170 | |
| 15 | Q | G | 0.0000 | |
| 16 | K | G | 0.0000 | |
| 17 | L | G | 0.0000 | |
| 18 | V | G | 0.0000 | |
| 19 | F | G | 0.0000 | |
| 20 | F | G | 0.0000 | |
| 21 | A | G | 0.0000 | |
| 22 | E | G | 0.0000 | |
| 23 | D | G | 0.0000 | |
| 24 | V | G | 0.0000 | |
| 25 | G | G | 0.0000 | |
| 26 | S | G | 0.0000 | |
| 27 | N | G | 0.0000 | |
| 28 | K | G | -0.5606 | |
| 29 | G | G | -0.3949 | |
| 30 | A | G | 0.0000 | |
| 31 | I | G | 0.8456 | |
| 32 | I | G | 0.0000 | |
| 33 | G | G | 0.0000 | |
| 34 | L | G | 0.9477 | |
| 35 | M | G | 0.0000 | |
| 36 | V | G | 0.8011 | |
| 37 | G | G | -0.5919 | |
| 1 | D | H | -3.5953 | |
| 2 | A | H | 0.0000 | |
| 3 | E | H | -2.7421 | |
| 4 | F | H | 0.0000 | |
| 5 | R | H | -1.6363 | |
| 6 | H | H | 0.0000 | |
| 7 | D | H | -1.1152 | |
| 8 | S | H | -0.1717 | |
| 9 | G | H | 0.3381 | |
| 10 | Y | H | 1.6720 | |
| 11 | E | H | 0.0000 | |
| 12 | V | H | 1.1289 | |
| 13 | H | H | 0.0000 | |
| 14 | H | H | -1.3586 | |
| 15 | Q | H | 0.0000 | |
| 16 | K | H | 0.0000 | |
| 17 | L | H | 0.0000 | |
| 18 | V | H | 0.0000 | |
| 19 | F | H | 0.0000 | |
| 20 | F | H | 0.0000 | |
| 21 | A | H | 0.0000 | |
| 22 | E | H | 0.0000 | |
| 23 | D | H | 0.0000 | |
| 24 | V | H | 0.0000 | |
| 25 | G | H | 0.0000 | |
| 26 | S | H | 0.0000 | |
| 27 | N | H | 0.0000 | |
| 28 | K | H | -0.5487 | |
| 29 | G | H | -0.4138 | |
| 30 | A | H | 0.0000 | |
| 31 | I | H | 0.8395 | |
| 32 | I | H | 0.0000 | |
| 33 | G | H | 0.0000 | |
| 34 | L | H | 0.9961 | |
| 35 | M | H | 0.0000 | |
| 36 | V | H | 0.8299 | |
| 37 | G | H | -0.5542 | |
| 1 | D | I | -3.6053 | |
| 2 | A | I | -2.6637 | |
| 3 | E | I | -2.4267 | |
| 4 | F | I | 0.0000 | |
| 5 | R | I | -2.0799 | |
| 6 | H | I | 0.0000 | |
| 7 | D | I | -2.3586 | |
| 8 | S | I | -1.1402 | |
| 9 | G | I | -0.1511 | |
| 10 | Y | I | 1.2731 | |
| 11 | E | I | 0.0000 | |
| 12 | V | I | 1.0064 | |
| 13 | H | I | 0.0000 | |
| 14 | H | I | -1.1133 | |
| 15 | Q | I | 0.0000 | |
| 16 | K | I | 0.0000 | |
| 17 | L | I | 0.0000 | |
| 18 | V | I | 0.0000 | |
| 19 | F | I | 0.0000 | |
| 20 | F | I | 0.0000 | |
| 21 | A | I | 0.0000 | |
| 22 | E | I | 0.0000 | |
| 23 | D | I | 0.0000 | |
| 24 | V | I | 0.0000 | |
| 25 | G | I | 0.0000 | |
| 26 | S | I | 0.0000 | |
| 27 | N | I | 0.0000 | |
| 28 | K | I | -0.9976 | |
| 29 | G | I | -0.4060 | |
| 30 | A | I | 0.0000 | |
| 31 | I | I | 1.2313 | |
| 32 | I | I | 0.0000 | |
| 33 | G | I | 0.0000 | |
| 34 | L | I | 1.6236 | |
| 35 | M | I | 0.0000 | |
| 36 | V | I | 1.2706 | |
| 37 | G | I | -0.2000 | |
| 1 | D | J | -4.0047 | |
| 2 | A | J | -2.9604 | |
| 3 | E | J | -2.6796 | |
| 4 | F | J | 0.0000 | |
| 5 | R | J | -1.9883 | |
| 6 | H | J | 0.0000 | |
| 7 | D | J | -1.7803 | |
| 8 | S | J | -0.7197 | |
| 9 | G | J | 0.2351 | |
| 10 | Y | J | 1.7511 | |
| 11 | E | J | 0.0000 | |
| 12 | V | J | 1.1822 | |
| 13 | H | J | 0.0000 | |
| 14 | H | J | -1.6705 | |
| 15 | Q | J | 0.0000 | |
| 16 | K | J | 0.0000 | |
| 17 | L | J | 0.0000 | |
| 18 | V | J | 0.0000 | |
| 19 | F | J | 0.0000 | |
| 20 | F | J | 0.0000 | |
| 21 | A | J | 0.0000 | |
| 22 | E | J | 0.0000 | |
| 23 | D | J | 0.0000 | |
| 24 | V | J | 0.0000 | |
| 25 | G | J | 0.0000 | |
| 26 | S | J | 0.0000 | |
| 27 | N | J | 0.0000 | |
| 28 | K | J | -1.0315 | |
| 29 | G | J | -0.4113 | |
| 30 | A | J | 0.0000 | |
| 31 | I | J | 1.2549 | |
| 32 | I | J | 0.0000 | |
| 33 | G | J | 0.0000 | |
| 34 | L | J | 1.7186 | |
| 35 | M | J | 1.2161 | |
| 36 | V | J | 1.4069 | |
| 37 | G | J | 0.0238 | |
| 1 | D | K | -2.8378 | |
| 2 | A | K | -2.4254 | |
| 3 | E | K | -2.3667 | |
| 4 | F | K | -0.8681 | |
| 5 | R | K | -2.0398 | |
| 6 | H | K | -2.2629 | |
| 7 | D | K | -2.9445 | |
| 8 | S | K | -1.6883 | |
| 9 | G | K | -0.4841 | |
| 10 | Y | K | 1.2116 | |
| 11 | E | K | 0.2356 | |
| 12 | V | K | 0.8388 | |
| 13 | H | K | -0.8211 | |
| 14 | H | K | -1.3975 | |
| 15 | Q | K | 0.0000 | |
| 16 | K | K | -0.7446 | |
| 17 | L | K | 0.2650 | |
| 18 | V | K | 0.4380 | |
| 19 | F | K | 0.5849 | |
| 20 | F | K | 0.2331 | |
| 21 | A | K | 0.0000 | |
| 22 | E | K | -1.5779 | |
| 23 | D | K | -2.1444 | |
| 24 | V | K | -0.8425 | |
| 25 | G | K | -0.9203 | |
| 26 | S | K | -1.1389 | |
| 27 | N | K | -0.6450 | |
| 28 | K | K | -1.3502 | |
| 29 | G | K | -0.4550 | |
| 30 | A | K | 0.4937 | |
| 31 | I | K | 2.2140 | |
| 32 | I | K | 1.5525 | |
| 33 | G | K | 1.2963 | |
| 34 | L | K | 2.1739 | |
| 35 | M | K | 1.4060 | |
| 36 | V | K | 2.0185 | |
| 37 | G | K | 0.2312 | |
| 1 | D | L | -3.0711 | |
| 2 | A | L | -2.6319 | |
| 3 | E | L | -2.6291 | |
| 4 | F | L | -1.4048 | |
| 5 | R | L | -2.3537 | |
| 6 | H | L | -2.1775 | |
| 7 | D | L | -2.6136 | |
| 8 | S | L | -1.3786 | |
| 9 | G | L | -0.1920 | |
| 10 | Y | L | 1.4579 | |
| 11 | E | L | 0.5685 | |
| 12 | V | L | 1.0211 | |
| 13 | H | L | -0.7945 | |
| 14 | H | L | -1.6209 | |
| 15 | Q | L | -1.2023 | |
| 16 | K | L | -1.3746 | |
| 17 | L | L | 0.2037 | |
| 18 | V | L | 0.7009 | |
| 19 | F | L | 0.9508 | |
| 20 | F | L | 0.2482 | |
| 21 | A | L | 0.0000 | |
| 22 | E | L | -1.9844 | |
| 23 | D | L | -2.2848 | |
| 24 | V | L | -0.7911 | |
| 25 | G | L | -1.0466 | |
| 26 | S | L | -1.2394 | |
| 27 | N | L | -0.7279 | |
| 28 | K | L | -1.2593 | |
| 29 | G | L | -0.3807 | |
| 30 | A | L | 0.5392 | |
| 31 | I | L | 2.2903 | |
| 32 | I | L | 1.6390 | |
| 33 | G | L | 0.9984 | |
| 34 | L | L | 2.2323 | |
| 35 | M | L | 1.8043 | |
| 36 | V | L | 2.1884 | |
| 37 | G | L | 0.4377 |