| Chain sequence(s) |
B: MAALMEAKKKLKEMKSKLKAAKTAEEVKALYEELVEVAKEIKALIDAAKA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:45)
[INFO] Main: Simulation completed successfully. (00:02:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | B | 1.2177 | |
| 2 | A | B | 0.2400 | |
| 3 | A | B | -0.3594 | |
| 4 | L | B | -0.3797 | |
| 5 | M | B | -0.6317 | |
| 6 | E | B | -2.4481 | |
| 7 | A | B | 0.0000 | |
| 8 | K | B | -2.8037 | |
| 9 | K | B | -3.8156 | |
| 10 | K | B | -3.6690 | |
| 11 | L | B | -3.0736 | |
| 12 | K | B | -4.2847 | |
| 13 | E | B | -4.1597 | |
| 14 | M | B | 0.0000 | |
| 15 | K | B | -3.3687 | |
| 16 | S | B | -2.9862 | |
| 17 | K | B | -3.1149 | |
| 18 | L | B | -2.2967 | |
| 19 | K | B | -2.4977 | |
| 20 | A | B | -1.8848 | |
| 21 | A | B | -2.3515 | |
| 22 | K | B | -2.4572 | |
| 23 | T | B | -1.8772 | |
| 24 | A | B | -1.8721 | |
| 25 | E | B | -2.9066 | |
| 26 | E | B | -2.7630 | |
| 27 | V | B | -2.1514 | |
| 28 | K | B | -2.5956 | |
| 29 | A | B | -1.7879 | |
| 30 | L | B | 0.0000 | |
| 31 | Y | B | -0.6159 | |
| 32 | E | B | -2.1330 | |
| 33 | E | B | -2.0909 | |
| 34 | L | B | -1.0719 | |
| 35 | V | B | -0.7133 | |
| 36 | E | B | -2.8901 | |
| 37 | V | B | 0.0000 | |
| 38 | A | B | -2.1115 | |
| 39 | K | B | -3.2332 | |
| 40 | E | B | -3.1212 | |
| 41 | I | B | -2.1135 | |
| 42 | K | B | -2.9266 | |
| 43 | A | B | -2.1078 | |
| 44 | L | B | -1.0074 | |
| 45 | I | B | -1.0366 | |
| 46 | D | B | -2.3982 | |
| 47 | A | B | -1.1142 | |
| 48 | A | B | -0.9132 | |
| 49 | K | B | -1.9636 | |
| 50 | A | B | -1.0355 |