Project name: c895b410381e621

Status: done

Started: 2026-06-22 16:07:02
Settings
Chain sequence(s) B: MAALMEAKKKLKEMKSKLKAAKTAEEVKALYEELVEVAKEIKALIDAAKA
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:45)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:45)
Show buried residues

Minimal score value
-4.2847
Maximal score value
1.2177
Average score
-1.9135
Total score value
-95.6766

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M B 1.2177
2 A B 0.2400
3 A B -0.3594
4 L B -0.3797
5 M B -0.6317
6 E B -2.4481
7 A B 0.0000
8 K B -2.8037
9 K B -3.8156
10 K B -3.6690
11 L B -3.0736
12 K B -4.2847
13 E B -4.1597
14 M B 0.0000
15 K B -3.3687
16 S B -2.9862
17 K B -3.1149
18 L B -2.2967
19 K B -2.4977
20 A B -1.8848
21 A B -2.3515
22 K B -2.4572
23 T B -1.8772
24 A B -1.8721
25 E B -2.9066
26 E B -2.7630
27 V B -2.1514
28 K B -2.5956
29 A B -1.7879
30 L B 0.0000
31 Y B -0.6159
32 E B -2.1330
33 E B -2.0909
34 L B -1.0719
35 V B -0.7133
36 E B -2.8901
37 V B 0.0000
38 A B -2.1115
39 K B -3.2332
40 E B -3.1212
41 I B -2.1135
42 K B -2.9266
43 A B -2.1078
44 L B -1.0074
45 I B -1.0366
46 D B -2.3982
47 A B -1.1142
48 A B -0.9132
49 K B -1.9636
50 A B -1.0355
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Laboratory of Theory of Biopolymers 2018