| Chain sequence(s) |
B: LAHMKAMMASREKAKEIILKMAELASPEVVEKAKEFGEKLDARFAEIVAA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:40)
[INFO] Main: Simulation completed successfully. (00:02:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | B | 1.0158 | |
| 2 | A | B | -0.0730 | |
| 3 | H | B | -0.6790 | |
| 4 | M | B | -0.0721 | |
| 5 | K | B | -1.2481 | |
| 6 | A | B | -0.8127 | |
| 7 | M | B | -0.5417 | |
| 8 | M | B | -1.0534 | |
| 9 | A | B | -1.4364 | |
| 10 | S | B | -1.7020 | |
| 11 | R | B | -2.0119 | |
| 12 | E | B | -3.1973 | |
| 13 | K | B | -3.1040 | |
| 14 | A | B | -1.8924 | |
| 15 | K | B | -2.4417 | |
| 16 | E | B | -2.7393 | |
| 17 | I | B | -0.8886 | |
| 18 | I | B | -0.3760 | |
| 19 | L | B | -1.1445 | |
| 20 | K | B | -0.7502 | |
| 21 | M | B | 0.6972 | |
| 22 | A | B | 0.0000 | |
| 23 | E | B | -1.2163 | |
| 24 | L | B | 0.8606 | |
| 25 | A | B | 0.1977 | |
| 26 | S | B | -0.8876 | |
| 27 | P | B | -1.7795 | |
| 28 | E | B | -2.8380 | |
| 29 | V | B | -1.8028 | |
| 30 | V | B | -2.3831 | |
| 31 | E | B | -4.0818 | |
| 32 | K | B | -3.5962 | |
| 33 | A | B | 0.0000 | |
| 34 | K | B | -3.9522 | |
| 35 | E | B | -3.9144 | |
| 36 | F | B | -1.8474 | |
| 37 | G | B | 0.0000 | |
| 38 | E | B | -3.3952 | |
| 39 | K | B | -2.7769 | |
| 40 | L | B | -2.0804 | |
| 41 | D | B | -2.1842 | |
| 42 | A | B | -1.7667 | |
| 43 | R | B | -2.3511 | |
| 44 | F | B | -0.6954 | |
| 45 | A | B | -0.6327 | |
| 46 | E | B | -1.2732 | |
| 47 | I | B | 0.8270 | |
| 48 | V | B | 0.8760 | |
| 49 | A | B | 0.1194 | |
| 50 | A | B | 0.3980 |