| Chain sequence(s) |
B: GVLMLTLVARGTVGEVTSLSVEDSGSRGTLTVTMRWVQGSVEAWLRDLTF
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:16)
[INFO] Main: Simulation completed successfully. (00:00:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | B | 1.5409 | |
| 2 | V | B | 3.2379 | |
| 3 | L | B | 3.0522 | |
| 4 | M | B | 2.4116 | |
| 5 | L | B | 1.8137 | |
| 6 | T | B | 1.1705 | |
| 7 | L | B | 1.0800 | |
| 8 | V | B | 0.0566 | |
| 9 | A | B | -0.5916 | |
| 10 | R | B | -2.0994 | |
| 11 | G | B | -1.5101 | |
| 12 | T | B | -0.3824 | |
| 13 | V | B | 0.0259 | |
| 14 | G | B | -0.2508 | |
| 15 | E | B | -1.1081 | |
| 16 | V | B | 0.9683 | |
| 17 | T | B | 0.2328 | |
| 18 | S | B | 0.7215 | |
| 19 | L | B | 2.2868 | |
| 20 | S | B | 0.8977 | |
| 21 | V | B | 0.6705 | |
| 22 | E | B | -2.3476 | |
| 23 | D | B | -3.1652 | |
| 24 | S | B | -2.2622 | |
| 25 | G | B | -2.0042 | |
| 26 | S | B | -1.7880 | |
| 27 | R | B | -3.1061 | |
| 28 | G | B | -2.5679 | |
| 29 | T | B | -1.1655 | |
| 30 | L | B | 0.8526 | |
| 31 | T | B | 0.7762 | |
| 32 | V | B | 1.4109 | |
| 33 | T | B | 0.4489 | |
| 34 | M | B | 0.1845 | |
| 35 | R | B | -1.1999 | |
| 36 | W | B | 0.3469 | |
| 37 | V | B | -0.0263 | |
| 38 | Q | B | -0.9686 | |
| 39 | G | B | -0.7129 | |
| 40 | S | B | -0.8491 | |
| 41 | V | B | -0.8331 | |
| 42 | E | B | -1.6734 | |
| 43 | A | B | -0.5101 | |
| 44 | W | B | 0.3834 | |
| 45 | L | B | 0.9695 | |
| 46 | R | B | -0.8606 | |
| 47 | D | B | -0.6392 | |
| 48 | L | B | 1.0325 | |
| 49 | T | B | 1.9450 | |
| 50 | F | B | 2.5953 |