| Chain sequence(s) |
A: MVEQFDKVLNNNSKPVGFLLSERFINVPAQIALPMHQQLQKELADTQRTNKPCGKCYYYLILSKTFVEAAKTSKGRVGSQAKEELMFANAEDEFFYEKALLKFSYSVQEESDTQLGGRWSFSDVPMAPLRTVMLVPADRMNSIMDKFKEYLSV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:39)
[INFO] Main: Simulation completed successfully. (00:04:40)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5554 | |
| 2 | V | A | 0.4809 | |
| 3 | E | A | -1.8729 | |
| 4 | Q | A | -1.4145 | |
| 5 | F | A | -1.1131 | |
| 6 | D | A | -2.7245 | |
| 7 | K | A | -3.1628 | |
| 8 | V | A | 0.0000 | |
| 9 | L | A | -1.2146 | |
| 10 | N | A | -2.4155 | |
| 11 | N | A | -2.3170 | |
| 12 | N | A | -2.1407 | |
| 13 | S | A | -1.4246 | |
| 14 | K | A | -1.1229 | |
| 15 | P | A | -0.4971 | |
| 16 | V | A | 0.6766 | |
| 17 | G | A | 1.4449 | |
| 18 | F | A | 2.5792 | |
| 19 | L | A | 0.0000 | |
| 20 | L | A | 1.6432 | |
| 21 | S | A | 0.0678 | |
| 22 | E | A | -1.0701 | |
| 23 | R | A | 0.1931 | |
| 24 | F | A | 2.0763 | |
| 25 | I | A | 2.1208 | |
| 26 | N | A | 0.4302 | |
| 27 | V | A | 0.9086 | |
| 28 | P | A | 0.1776 | |
| 29 | A | A | 0.1016 | |
| 30 | Q | A | 0.0525 | |
| 31 | I | A | 0.5345 | |
| 32 | A | A | 0.0000 | |
| 33 | L | A | -0.6123 | |
| 34 | P | A | -0.4336 | |
| 35 | M | A | 0.2765 | |
| 36 | H | A | 0.0000 | |
| 37 | Q | A | -2.1301 | |
| 38 | Q | A | -2.4289 | |
| 39 | L | A | -1.8935 | |
| 40 | Q | A | -2.8420 | |
| 41 | K | A | -3.8616 | |
| 42 | E | A | -3.8914 | |
| 43 | L | A | -2.8913 | |
| 44 | A | A | -2.9546 | |
| 45 | D | A | -3.7969 | |
| 46 | T | A | -3.4101 | |
| 47 | Q | A | -3.7754 | |
| 48 | R | A | -3.7295 | |
| 49 | T | A | -2.6378 | |
| 50 | N | A | -3.1989 | |
| 51 | K | A | -2.7264 | |
| 52 | P | A | -1.3571 | |
| 53 | C | A | -0.6898 | |
| 54 | G | A | -2.2862 | |
| 55 | K | A | -1.7272 | |
| 56 | C | A | 0.0758 | |
| 57 | Y | A | 0.2942 | |
| 58 | Y | A | 0.6827 | |
| 59 | Y | A | 0.0000 | |
| 60 | L | A | 1.3681 | |
| 61 | I | A | 0.0000 | |
| 62 | L | A | 0.4376 | |
| 63 | S | A | 0.0000 | |
| 64 | K | A | -1.0898 | |
| 65 | T | A | 0.0000 | |
| 66 | F | A | 0.0000 | |
| 67 | V | A | -1.5599 | |
| 68 | E | A | -2.4578 | |
| 69 | A | A | -1.4021 | |
| 70 | A | A | -1.4917 | |
| 71 | K | A | -2.2599 | |
| 72 | T | A | -1.7193 | |
| 73 | S | A | -1.9711 | |
| 74 | K | A | -2.4886 | |
| 75 | G | A | -1.8737 | |
| 76 | R | A | -1.8072 | |
| 77 | V | A | 0.0956 | |
| 78 | G | A | -0.5635 | |
| 79 | S | A | -1.1597 | |
| 80 | Q | A | -1.9681 | |
| 81 | A | A | -2.3043 | |
| 82 | K | A | -3.4092 | |
| 83 | E | A | -3.9029 | |
| 84 | E | A | -3.2001 | |
| 85 | L | A | -1.4435 | |
| 86 | M | A | -0.6343 | |
| 87 | F | A | 0.0000 | |
| 88 | A | A | 0.0562 | |
| 89 | N | A | -0.1891 | |
| 90 | A | A | -0.4624 | |
| 91 | E | A | 0.0000 | |
| 92 | D | A | 0.0000 | |
| 93 | E | A | -1.6092 | |
| 94 | F | A | -1.4272 | |
| 95 | F | A | 0.0000 | |
| 96 | Y | A | -1.1861 | |
| 97 | E | A | -2.2258 | |
| 98 | K | A | -1.5707 | |
| 99 | A | A | -0.5242 | |
| 100 | L | A | 0.5604 | |
| 101 | L | A | 0.4658 | |
| 102 | K | A | -0.3079 | |
| 103 | F | A | 0.4101 | |
| 104 | S | A | 0.2772 | |
| 105 | Y | A | 0.6449 | |
| 106 | S | A | -0.6855 | |
| 107 | V | A | 0.0000 | |
| 108 | Q | A | -3.0810 | |
| 109 | E | A | -3.6271 | |
| 110 | E | A | -3.4992 | |
| 111 | S | A | -2.8002 | |
| 112 | D | A | -2.8155 | |
| 113 | T | A | -1.6570 | |
| 114 | Q | A | -0.8682 | |
| 115 | L | A | 0.2885 | |
| 116 | G | A | -0.4270 | |
| 117 | G | A | -0.7919 | |
| 118 | R | A | -1.1232 | |
| 119 | W | A | 0.7054 | |
| 120 | S | A | 0.8943 | |
| 121 | F | A | 1.9777 | |
| 122 | S | A | 0.7976 | |
| 123 | D | A | 0.0000 | |
| 124 | V | A | -0.2744 | |
| 125 | P | A | -0.3042 | |
| 126 | M | A | 0.0000 | |
| 127 | A | A | -1.1202 | |
| 128 | P | A | 0.0000 | |
| 129 | L | A | -0.1964 | |
| 130 | R | A | -0.3765 | |
| 131 | T | A | 0.0000 | |
| 132 | V | A | 0.0000 | |
| 133 | M | A | 0.0000 | |
| 134 | L | A | 0.0000 | |
| 135 | V | A | 0.0000 | |
| 136 | P | A | 0.0000 | |
| 137 | A | A | -0.9885 | |
| 138 | D | A | -2.2579 | |
| 139 | R | A | -2.0235 | |
| 140 | M | A | 0.0000 | |
| 141 | N | A | -2.5568 | |
| 142 | S | A | -2.1807 | |
| 143 | I | A | 0.0000 | |
| 144 | M | A | -2.2351 | |
| 145 | D | A | -3.1602 | |
| 146 | K | A | -2.4583 | |
| 147 | F | A | 0.0000 | |
| 148 | K | A | -2.6228 | |
| 149 | E | A | -2.3545 | |
| 150 | Y | A | -0.2271 | |
| 151 | L | A | -0.2593 | |
| 152 | S | A | 0.0003 | |
| 153 | V | A | 1.3757 |