Chain sequence(s) |
C: EVQLVESGGGLVQPGGSLRLSCAASDFTFRSYEMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAIYYCARLRDGFNKGFDYWGQGTLVTVSS
input PDB |
Selected Chain(s) | C |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | GH44C,SE21C,SF52C,SN25C,LY99C,SV75C,SV63C,MP83C,TY58C,LK18C,QD39C,SH119C,NQ104C,VA2C,TQ114C,SI7C,GL15C |
Energy difference between WT (input) and mutated protein (by FoldX) | 18.3492 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:25) [INFO] FoldX: Starting FoldX energy minimalization (00:02:54) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:25) [INFO] Main: Simulation completed successfully. (00:03:25) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | E | C | -2.2522 | |
2 | A | C | -1.4398 | mutated: VA2C |
3 | Q | C | -1.7563 | |
4 | L | C | 0.0000 | |
5 | V | C | 0.4408 | |
6 | E | C | 0.0000 | |
7 | I | C | 0.9839 | mutated: SI7C |
8 | G | C | -0.0945 | |
9 | G | C | 0.3224 | |
10 | G | C | 1.0060 | |
11 | L | C | 1.2199 | |
12 | V | C | -0.0489 | |
13 | Q | C | -1.0971 | |
14 | P | C | -0.6116 | |
15 | L | C | 0.6764 | mutated: GL15C |
16 | G | C | -0.0616 | |
17 | S | C | -0.9242 | |
18 | K | C | -1.3089 | mutated: LK18C |
19 | R | C | -1.9339 | |
20 | L | C | 0.0000 | |
21 | E | C | -0.4511 | mutated: SE21C |
22 | C | C | 0.0000 | |
23 | A | C | -0.4075 | |
24 | A | C | 0.0000 | |
25 | N | C | -1.3726 | mutated: SN25C |
26 | D | C | 0.0000 | |
27 | F | C | 1.2478 | |
28 | T | C | 0.0900 | |
29 | F | C | 0.0000 | |
30 | R | C | -1.5133 | |
31 | S | C | -0.6355 | |
32 | Y | C | -0.8430 | |
33 | E | C | -0.3702 | |
34 | M | C | 0.0000 | |
35 | S | C | 0.0000 | |
36 | W | C | 0.0000 | |
37 | V | C | 0.0000 | |
38 | R | C | 0.0000 | |
39 | D | C | -0.4052 | mutated: QD39C |
40 | A | C | -1.0682 | |
41 | P | C | -1.3489 | |
42 | G | C | -1.5578 | |
43 | K | C | -2.3965 | |
44 | H | C | -1.6316 | mutated: GH44C |
45 | L | C | 0.0165 | |
46 | E | C | -0.4786 | |
47 | W | C | 0.3104 | |
48 | V | C | 0.0000 | |
49 | S | C | 0.0000 | |
50 | A | C | 0.0000 | |
51 | I | C | 0.0000 | |
52 | F | C | 1.1490 | mutated: SF52C |
53 | G | C | 0.0000 | |
54 | S | C | -0.7357 | |
55 | G | C | -0.2144 | |
56 | G | C | -0.0382 | |
57 | S | C | 0.8429 | |
58 | Y | C | 1.9017 | mutated: TY58C |
59 | Y | C | 1.4190 | |
60 | Y | C | 0.1385 | |
61 | A | C | -0.6852 | |
62 | D | C | -1.6586 | |
63 | V | C | -0.2810 | mutated: SV63C |
64 | V | C | 0.0000 | |
65 | K | C | -1.9979 | |
66 | G | C | -1.4344 | |
67 | R | C | 0.0000 | |
68 | F | C | 0.0000 | |
69 | T | C | -0.4567 | |
70 | I | C | 0.0000 | |
71 | S | C | -0.2837 | |
72 | R | C | -1.0112 | |
73 | D | C | -1.3548 | |
74 | N | C | -1.2016 | |
75 | V | C | 0.2048 | mutated: SV75C |
76 | K | C | -1.3687 | |
77 | N | C | -1.2855 | |
78 | T | C | 0.0000 | |
79 | L | C | 0.0000 | |
80 | Y | C | 0.0000 | |
81 | L | C | 0.0000 | |
82 | Q | C | -1.3223 | |
83 | P | C | 0.0000 | mutated: MP83C |
84 | N | C | -0.9220 | |
85 | S | C | -0.3252 | |
86 | L | C | 0.0000 | |
87 | R | C | -2.0954 | |
88 | A | C | -1.8916 | |
89 | E | C | -2.2787 | |
90 | D | C | 0.0000 | |
91 | T | C | -0.5343 | |
92 | A | C | 0.0000 | |
93 | I | C | 1.0208 | |
94 | Y | C | 0.0000 | |
95 | Y | C | 0.5897 | |
96 | C | C | 0.0000 | |
97 | A | C | 0.0000 | |
98 | R | C | 0.0000 | |
99 | Y | C | 0.0000 | mutated: LY99C |
100 | R | C | -3.2261 | |
101 | D | C | -3.3487 | |
102 | G | C | -1.9531 | |
103 | F | C | -1.1885 | |
104 | Q | C | -2.4640 | mutated: NQ104C |
105 | K | C | -3.2253 | |
106 | G | C | -1.9858 | |
107 | F | C | -1.1018 | |
108 | D | C | -1.1757 | |
109 | Y | C | -0.2660 | |
110 | W | C | 0.5484 | |
111 | G | C | -0.1544 | |
112 | Q | C | -0.7886 | |
113 | G | C | 0.0000 | |
114 | Q | C | 0.6056 | mutated: TQ114C |
115 | L | C | 1.8613 | |
116 | V | C | 0.0000 | |
117 | T | C | 0.1522 | |
118 | V | C | 0.0000 | |
119 | H | C | -1.6046 | mutated: SH119C |
120 | S | C | -1.4439 |