Project name: obj1 [mutate: VA2C, SI7C, GL15C, LK18C, SE21C, SN25C, QD39C, GH44C, SF52C, SV75C, MP83C, SH119C, TQ114C, NQ104C, LY99C, TY58C, SV63C]

Status: done

Started: 2025-02-11 08:45:34
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Chain sequence(s) C: EVQLVESGGGLVQPGGSLRLSCAASDFTFRSYEMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAIYYCARLRDGFNKGFDYWGQGTLVTVSS
input PDB
Selected Chain(s) C
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues GH44C,SE21C,SF52C,SN25C,LY99C,SV75C,SV63C,MP83C,TY58C,LK18C,QD39C,SH119C,NQ104C,VA2C,TQ114C,SI7C,GL15C
Energy difference between WT (input) and mutated protein (by FoldX) 18.3492 kcal/mol

CAUTION: Your mutation/s can destabilize the protein structure

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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with C chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       FoldX:    Building mutant model                                                       (00:00:25)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:02:54)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:25)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:25)
Show buried residues

Minimal score value
-3.3487
Maximal score value
1.9017
Average score
-0.4714
Total score value
-56.5646

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E C -2.2522
2 A C -1.4398 mutated: VA2C
3 Q C -1.7563
4 L C 0.0000
5 V C 0.4408
6 E C 0.0000
7 I C 0.9839 mutated: SI7C
8 G C -0.0945
9 G C 0.3224
10 G C 1.0060
11 L C 1.2199
12 V C -0.0489
13 Q C -1.0971
14 P C -0.6116
15 L C 0.6764 mutated: GL15C
16 G C -0.0616
17 S C -0.9242
18 K C -1.3089 mutated: LK18C
19 R C -1.9339
20 L C 0.0000
21 E C -0.4511 mutated: SE21C
22 C C 0.0000
23 A C -0.4075
24 A C 0.0000
25 N C -1.3726 mutated: SN25C
26 D C 0.0000
27 F C 1.2478
28 T C 0.0900
29 F C 0.0000
30 R C -1.5133
31 S C -0.6355
32 Y C -0.8430
33 E C -0.3702
34 M C 0.0000
35 S C 0.0000
36 W C 0.0000
37 V C 0.0000
38 R C 0.0000
39 D C -0.4052 mutated: QD39C
40 A C -1.0682
41 P C -1.3489
42 G C -1.5578
43 K C -2.3965
44 H C -1.6316 mutated: GH44C
45 L C 0.0165
46 E C -0.4786
47 W C 0.3104
48 V C 0.0000
49 S C 0.0000
50 A C 0.0000
51 I C 0.0000
52 F C 1.1490 mutated: SF52C
53 G C 0.0000
54 S C -0.7357
55 G C -0.2144
56 G C -0.0382
57 S C 0.8429
58 Y C 1.9017 mutated: TY58C
59 Y C 1.4190
60 Y C 0.1385
61 A C -0.6852
62 D C -1.6586
63 V C -0.2810 mutated: SV63C
64 V C 0.0000
65 K C -1.9979
66 G C -1.4344
67 R C 0.0000
68 F C 0.0000
69 T C -0.4567
70 I C 0.0000
71 S C -0.2837
72 R C -1.0112
73 D C -1.3548
74 N C -1.2016
75 V C 0.2048 mutated: SV75C
76 K C -1.3687
77 N C -1.2855
78 T C 0.0000
79 L C 0.0000
80 Y C 0.0000
81 L C 0.0000
82 Q C -1.3223
83 P C 0.0000 mutated: MP83C
84 N C -0.9220
85 S C -0.3252
86 L C 0.0000
87 R C -2.0954
88 A C -1.8916
89 E C -2.2787
90 D C 0.0000
91 T C -0.5343
92 A C 0.0000
93 I C 1.0208
94 Y C 0.0000
95 Y C 0.5897
96 C C 0.0000
97 A C 0.0000
98 R C 0.0000
99 Y C 0.0000 mutated: LY99C
100 R C -3.2261
101 D C -3.3487
102 G C -1.9531
103 F C -1.1885
104 Q C -2.4640 mutated: NQ104C
105 K C -3.2253
106 G C -1.9858
107 F C -1.1018
108 D C -1.1757
109 Y C -0.2660
110 W C 0.5484
111 G C -0.1544
112 Q C -0.7886
113 G C 0.0000
114 Q C 0.6056 mutated: TQ114C
115 L C 1.8613
116 V C 0.0000
117 T C 0.1522
118 V C 0.0000
119 H C -1.6046 mutated: SH119C
120 S C -1.4439
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Laboratory of Theory of Biopolymers 2018