| Chain sequence(s) |
C: EVQLVESGGGLVQPGGSLRLSCAASDFTFRSYEMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAIYYCARLRDGFNKGFDYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | C |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | GH44C,SE21C,SF52C,SN25C,LY99C,SV75C,SV63C,MP83C,TY58C,LK18C,QD39C,SH119C,NQ104C,VA2C,TQ114C,SI7C,GL15C |
| Energy difference between WT (input) and mutated protein (by FoldX) | 18.3492 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:00:25)
[INFO] FoldX: Starting FoldX energy minimalization (00:02:54)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:25)
[INFO] Main: Simulation completed successfully. (00:03:25)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | C | -2.2522 | |
| 2 | A | C | -1.4398 | mutated: VA2C |
| 3 | Q | C | -1.7563 | |
| 4 | L | C | 0.0000 | |
| 5 | V | C | 0.4408 | |
| 6 | E | C | 0.0000 | |
| 7 | I | C | 0.9839 | mutated: SI7C |
| 8 | G | C | -0.0945 | |
| 9 | G | C | 0.3224 | |
| 10 | G | C | 1.0060 | |
| 11 | L | C | 1.2199 | |
| 12 | V | C | -0.0489 | |
| 13 | Q | C | -1.0971 | |
| 14 | P | C | -0.6116 | |
| 15 | L | C | 0.6764 | mutated: GL15C |
| 16 | G | C | -0.0616 | |
| 17 | S | C | -0.9242 | |
| 18 | K | C | -1.3089 | mutated: LK18C |
| 19 | R | C | -1.9339 | |
| 20 | L | C | 0.0000 | |
| 21 | E | C | -0.4511 | mutated: SE21C |
| 22 | C | C | 0.0000 | |
| 23 | A | C | -0.4075 | |
| 24 | A | C | 0.0000 | |
| 25 | N | C | -1.3726 | mutated: SN25C |
| 26 | D | C | 0.0000 | |
| 27 | F | C | 1.2478 | |
| 28 | T | C | 0.0900 | |
| 29 | F | C | 0.0000 | |
| 30 | R | C | -1.5133 | |
| 31 | S | C | -0.6355 | |
| 32 | Y | C | -0.8430 | |
| 33 | E | C | -0.3702 | |
| 34 | M | C | 0.0000 | |
| 35 | S | C | 0.0000 | |
| 36 | W | C | 0.0000 | |
| 37 | V | C | 0.0000 | |
| 38 | R | C | 0.0000 | |
| 39 | D | C | -0.4052 | mutated: QD39C |
| 40 | A | C | -1.0682 | |
| 41 | P | C | -1.3489 | |
| 42 | G | C | -1.5578 | |
| 43 | K | C | -2.3965 | |
| 44 | H | C | -1.6316 | mutated: GH44C |
| 45 | L | C | 0.0165 | |
| 46 | E | C | -0.4786 | |
| 47 | W | C | 0.3104 | |
| 48 | V | C | 0.0000 | |
| 49 | S | C | 0.0000 | |
| 50 | A | C | 0.0000 | |
| 51 | I | C | 0.0000 | |
| 52 | F | C | 1.1490 | mutated: SF52C |
| 53 | G | C | 0.0000 | |
| 54 | S | C | -0.7357 | |
| 55 | G | C | -0.2144 | |
| 56 | G | C | -0.0382 | |
| 57 | S | C | 0.8429 | |
| 58 | Y | C | 1.9017 | mutated: TY58C |
| 59 | Y | C | 1.4190 | |
| 60 | Y | C | 0.1385 | |
| 61 | A | C | -0.6852 | |
| 62 | D | C | -1.6586 | |
| 63 | V | C | -0.2810 | mutated: SV63C |
| 64 | V | C | 0.0000 | |
| 65 | K | C | -1.9979 | |
| 66 | G | C | -1.4344 | |
| 67 | R | C | 0.0000 | |
| 68 | F | C | 0.0000 | |
| 69 | T | C | -0.4567 | |
| 70 | I | C | 0.0000 | |
| 71 | S | C | -0.2837 | |
| 72 | R | C | -1.0112 | |
| 73 | D | C | -1.3548 | |
| 74 | N | C | -1.2016 | |
| 75 | V | C | 0.2048 | mutated: SV75C |
| 76 | K | C | -1.3687 | |
| 77 | N | C | -1.2855 | |
| 78 | T | C | 0.0000 | |
| 79 | L | C | 0.0000 | |
| 80 | Y | C | 0.0000 | |
| 81 | L | C | 0.0000 | |
| 82 | Q | C | -1.3223 | |
| 83 | P | C | 0.0000 | mutated: MP83C |
| 84 | N | C | -0.9220 | |
| 85 | S | C | -0.3252 | |
| 86 | L | C | 0.0000 | |
| 87 | R | C | -2.0954 | |
| 88 | A | C | -1.8916 | |
| 89 | E | C | -2.2787 | |
| 90 | D | C | 0.0000 | |
| 91 | T | C | -0.5343 | |
| 92 | A | C | 0.0000 | |
| 93 | I | C | 1.0208 | |
| 94 | Y | C | 0.0000 | |
| 95 | Y | C | 0.5897 | |
| 96 | C | C | 0.0000 | |
| 97 | A | C | 0.0000 | |
| 98 | R | C | 0.0000 | |
| 99 | Y | C | 0.0000 | mutated: LY99C |
| 100 | R | C | -3.2261 | |
| 101 | D | C | -3.3487 | |
| 102 | G | C | -1.9531 | |
| 103 | F | C | -1.1885 | |
| 104 | Q | C | -2.4640 | mutated: NQ104C |
| 105 | K | C | -3.2253 | |
| 106 | G | C | -1.9858 | |
| 107 | F | C | -1.1018 | |
| 108 | D | C | -1.1757 | |
| 109 | Y | C | -0.2660 | |
| 110 | W | C | 0.5484 | |
| 111 | G | C | -0.1544 | |
| 112 | Q | C | -0.7886 | |
| 113 | G | C | 0.0000 | |
| 114 | Q | C | 0.6056 | mutated: TQ114C |
| 115 | L | C | 1.8613 | |
| 116 | V | C | 0.0000 | |
| 117 | T | C | 0.1522 | |
| 118 | V | C | 0.0000 | |
| 119 | H | C | -1.6046 | mutated: SH119C |
| 120 | S | C | -1.4439 |