| Chain sequence(s) |
A: ESCVLIPCISSVIGCSCKSKVCYRNGIPCG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:33)
[INFO] Main: Simulation completed successfully. (00:00:34)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -0.0378 | |
| 2 | S | A | 0.3953 | |
| 3 | C | A | 1.1659 | |
| 4 | V | A | 1.6743 | |
| 5 | L | A | 2.5584 | |
| 6 | I | A | 2.6504 | |
| 7 | P | A | 1.5097 | |
| 8 | C | A | 0.0000 | |
| 9 | I | A | 2.7142 | |
| 10 | S | A | 1.7613 | |
| 11 | S | A | 1.6123 | |
| 12 | V | A | 2.9920 | |
| 13 | I | A | 2.6650 | |
| 14 | G | A | 0.6092 | |
| 15 | C | A | 0.0000 | |
| 16 | S | A | -0.3006 | |
| 17 | C | A | -0.3536 | |
| 18 | K | A | -1.5353 | |
| 19 | S | A | -1.1183 | |
| 20 | K | A | -1.0539 | |
| 21 | V | A | -0.3592 | |
| 22 | C | A | 0.0000 | |
| 23 | Y | A | -0.9764 | |
| 24 | R | A | -1.8227 | |
| 25 | N | A | -1.8121 | |
| 26 | G | A | -0.8406 | |
| 27 | I | A | 0.7418 | |
| 28 | P | A | -0.1179 | |
| 29 | C | A | -0.0184 | |
| 30 | G | A | -0.4969 |