Project name: query_structure

Status: done

Started: 2026-03-16 23:09:36
Settings
Chain sequence(s) A: ESCVLIPCISSVIGCSCKSKVCYRNGIPCG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:33)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:34)
Show buried residues

Minimal score value
-1.8227
Maximal score value
2.992
Average score
0.4069
Total score value
12.2061

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A -0.0378
2 S A 0.3953
3 C A 1.1659
4 V A 1.6743
5 L A 2.5584
6 I A 2.6504
7 P A 1.5097
8 C A 0.0000
9 I A 2.7142
10 S A 1.7613
11 S A 1.6123
12 V A 2.9920
13 I A 2.6650
14 G A 0.6092
15 C A 0.0000
16 S A -0.3006
17 C A -0.3536
18 K A -1.5353
19 S A -1.1183
20 K A -1.0539
21 V A -0.3592
22 C A 0.0000
23 Y A -0.9764
24 R A -1.8227
25 N A -1.8121
26 G A -0.8406
27 I A 0.7418
28 P A -0.1179
29 C A -0.0184
30 G A -0.4969
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Laboratory of Theory of Biopolymers 2018