| Chain sequence(s) |
H: EVQVVESGGGVIQPGGSLRLSCAASGFTVETNFMTWVRQAPGKGPEWVSVTYTSGTTYYADSVKGRFTVSRDNSKNTLFLQMNSLRAEDTAVYYCAKGHIVLIPPTVVRGGALDVWGQGTTVTVSS
L: DIQMTQSPSSLSASVGDRVTITCQASQNINNYLSWYQQKPGEAPRLLIYDGFNLQTGAPSRFSGRRSGTDFSFIISSLQPEDIATYYCQQYDSLPWTFGQGTKVELK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:10)
[INFO] Main: Simulation completed successfully. (00:01:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.7019 | |
| 2 | V | H | -0.4653 | |
| 3 | Q | H | -0.7993 | |
| 4 | V | H | 0.0000 | |
| 5 | V | H | 0.3529 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.5224 | |
| 8 | G | H | -0.8001 | |
| 9 | G | H | -0.2486 | |
| 11 | G | H | 0.4516 | |
| 12 | V | H | 1.4929 | |
| 13 | I | H | 0.2650 | |
| 14 | Q | H | -1.2057 | |
| 15 | P | H | -1.3723 | |
| 16 | G | H | -1.4140 | |
| 17 | G | H | -0.9114 | |
| 18 | S | H | -1.0219 | |
| 19 | L | H | -0.5940 | |
| 20 | R | H | -1.5035 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.3521 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.2636 | |
| 25 | A | H | -0.2351 | |
| 26 | S | H | -0.4831 | |
| 27 | G | H | -0.7391 | |
| 28 | F | H | -0.3656 | |
| 29 | T | H | -0.8511 | |
| 30 | V | H | 0.0000 | |
| 35 | E | H | -1.6209 | |
| 36 | T | H | -0.6611 | |
| 37 | N | H | 0.0000 | |
| 38 | F | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | T | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.8483 | |
| 45 | A | H | -1.2033 | |
| 46 | P | H | -0.9910 | |
| 47 | G | H | -1.4435 | |
| 48 | K | H | -2.3876 | |
| 49 | G | H | -1.6158 | |
| 50 | P | H | 0.0000 | |
| 51 | E | H | -1.1009 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | S | H | 0.0000 | |
| 55 | V | H | 0.0000 | |
| 56 | T | H | 0.0000 | |
| 57 | Y | H | -0.0309 | |
| 58 | T | H | -0.4291 | |
| 59 | S | H | -0.4385 | |
| 63 | G | H | -0.4417 | |
| 64 | T | H | -0.0288 | |
| 65 | T | H | 0.2271 | |
| 66 | Y | H | 0.2999 | |
| 67 | Y | H | -0.5257 | |
| 68 | A | H | -1.4111 | |
| 69 | D | H | -2.5834 | |
| 70 | S | H | -1.7177 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.4794 | |
| 74 | G | H | -1.6967 | |
| 75 | R | H | -1.6119 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.7145 | |
| 78 | V | H | 0.0000 | |
| 79 | S | H | -0.5238 | |
| 80 | R | H | -1.3604 | |
| 81 | D | H | -1.9857 | |
| 82 | N | H | -2.6245 | |
| 83 | S | H | -1.9964 | |
| 84 | K | H | -2.5267 | |
| 85 | N | H | -1.9791 | |
| 86 | T | H | -1.2550 | |
| 87 | L | H | 0.0000 | |
| 88 | F | H | -0.4072 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.0431 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.2494 | |
| 93 | S | H | -1.2285 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.2571 | |
| 96 | A | H | -1.6786 | |
| 97 | E | H | -2.1963 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.6004 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.0072 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | K | H | -0.3813 | |
| 107 | G | H | 0.0000 | |
| 108 | H | H | -0.0986 | |
| 109 | I | H | 0.0000 | |
| 110 | V | H | 1.3518 | |
| 111 | L | H | 1.7032 | |
| 111A | I | H | 2.5047 | |
| 111B | P | H | 1.2314 | |
| 111C | P | H | 0.7861 | |
| 112D | T | H | 1.1829 | |
| 112C | V | H | 2.2152 | |
| 112B | V | H | 1.6103 | |
| 112A | R | H | 0.5705 | |
| 112 | G | H | 0.0000 | |
| 113 | G | H | 0.0000 | |
| 114 | A | H | 0.0000 | |
| 115 | L | H | 0.0000 | |
| 116 | D | H | -0.8149 | |
| 117 | V | H | -0.2632 | |
| 118 | W | H | -0.4239 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.2050 | |
| 121 | G | H | -0.4983 | |
| 122 | T | H | -0.3103 | |
| 123 | T | H | 0.1077 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.0838 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.4813 | |
| 128 | S | H | -0.5352 | |
| 1 | D | L | -2.3224 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.0991 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.0615 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.7839 | |
| 8 | P | L | -0.7364 | |
| 9 | S | L | -1.0550 | |
| 10 | S | L | -1.2738 | |
| 11 | L | L | -0.9974 | |
| 12 | S | L | -1.3423 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.7465 | |
| 15 | V | L | 0.2496 | |
| 16 | G | L | -0.5613 | |
| 17 | D | L | -1.4631 | |
| 18 | R | L | -2.0241 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.4314 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.5898 | |
| 23 | C | L | 0.0000 | |
| 24 | Q | L | -1.6381 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.6905 | |
| 27 | Q | L | -2.1213 | |
| 28 | N | L | -2.1847 | |
| 29 | I | L | 0.0000 | |
| 36 | N | L | -1.6053 | |
| 37 | N | L | -1.3108 | |
| 38 | Y | L | -0.3889 | |
| 39 | L | L | 0.0000 | |
| 40 | S | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -1.1546 | |
| 45 | K | L | -1.4639 | |
| 46 | P | L | -0.8339 | |
| 47 | G | L | -1.1542 | |
| 48 | E | L | -1.5125 | |
| 49 | A | L | -1.0970 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -1.5411 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.1110 | |
| 56 | D | L | -0.3821 | |
| 57 | G | L | 0.0000 | |
| 65 | F | L | 0.2106 | |
| 66 | N | L | -0.0677 | |
| 67 | L | L | 0.3357 | |
| 68 | Q | L | -0.3241 | |
| 69 | T | L | -0.4228 | |
| 70 | G | L | -0.5187 | |
| 71 | A | L | -0.4833 | |
| 72 | P | L | -0.3657 | |
| 74 | S | L | -0.4202 | |
| 75 | R | L | -0.6794 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.1208 | |
| 78 | G | L | -0.3892 | |
| 79 | R | L | -1.6671 | |
| 80 | R | L | -1.6646 | |
| 83 | S | L | -1.2860 | |
| 84 | G | L | -1.4433 | |
| 85 | T | L | -1.6465 | |
| 86 | D | L | -1.7055 | |
| 87 | F | L | 0.0000 | |
| 88 | S | L | 0.0000 | |
| 89 | F | L | 0.0000 | |
| 90 | I | L | -0.3472 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.0565 | |
| 93 | S | L | -1.0049 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.7352 | |
| 96 | P | L | -1.0081 | |
| 97 | E | L | -1.9534 | |
| 98 | D | L | 0.0000 | |
| 99 | I | L | -1.1198 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | 0.0000 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.0000 | |
| 108 | D | L | -0.5325 | |
| 109 | S | L | -0.2488 | |
| 114 | L | L | 0.0643 | |
| 115 | P | L | -0.6120 | |
| 116 | W | L | 0.0000 | |
| 117 | T | L | -0.8228 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.9864 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -2.3216 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -1.7596 | |
| 126 | L | L | -0.7211 | |
| 127 | K | L | -1.5871 |