| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPVHPGPDDRVAFSYDPKQTQLFIVGCEPPTGEHWDIAPPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRSGPDGVPPPAAPPPPPTYVRPPPSSPHAVPPPRDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPPINVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9460 | |
| 2 | L | A | 1.9690 | |
| 3 | P | A | 0.6487 | |
| 4 | P | A | 0.3519 | |
| 5 | T | A | 0.1135 | |
| 6 | T | A | 0.1270 | |
| 7 | P | A | 0.1752 | |
| 8 | V | A | 1.2246 | |
| 9 | A | A | 0.0387 | |
| 10 | K | A | -1.1478 | |
| 11 | V | A | -0.3860 | |
| 12 | Q | A | -1.5108 | |
| 13 | S | A | -1.6005 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4278 | |
| 16 | E | A | -2.4405 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4560 | |
| 20 | P | A | 0.1068 | |
| 21 | T | A | 0.1140 | |
| 22 | S | A | -0.1702 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0944 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2994 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8791 | |
| 31 | R | A | -2.6457 | |
| 32 | L | A | -0.7773 | |
| 33 | L | A | 1.2162 | |
| 34 | T | A | 1.6466 | |
| 35 | V | A | 2.0231 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2004 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6213 | |
| 40 | K | A | -1.6211 | |
| 41 | D | A | -0.9187 | |
| 42 | I | A | 0.8062 | |
| 43 | V | A | 1.0038 | |
| 44 | K | A | -1.2028 | |
| 45 | N | A | -1.9335 | |
| 46 | G | A | -1.2397 | |
| 47 | K | A | -0.9513 | |
| 48 | V | A | 1.4775 | |
| 49 | V | A | 2.0526 | |
| 50 | V | A | 1.3069 | |
| 51 | P | A | 0.4942 | |
| 52 | K | A | -0.6094 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1271 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4765 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3015 | |
| 70 | K | A | -1.8204 | |
| 71 | F | A | -0.6821 | |
| 72 | A | A | -0.5821 | |
| 73 | L | A | -0.9300 | |
| 74 | P | A | -1.2609 | |
| 75 | Q | A | -2.4764 | |
| 76 | K | A | -3.0905 | |
| 77 | D | A | -2.9802 | |
| 78 | F | A | -1.6354 | |
| 79 | Y | A | -1.8948 | |
| 80 | D | A | -2.7297 | |
| 81 | P | A | -2.3419 | |
| 82 | E | A | -3.0614 | |
| 83 | K | A | -3.4291 | |
| 84 | E | A | -2.4833 | |
| 85 | R | A | -1.3024 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6213 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9696 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3138 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6710 | |
| 99 | G | A | -0.5387 | |
| 100 | P | A | -0.4238 | |
| 101 | L | A | -0.0010 | |
| 102 | G | A | -0.2804 | |
| 103 | K | A | -0.7327 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4607 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1541 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4061 | |
| 110 | L | A | 0.2801 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1441 | |
| 113 | K | A | -0.4440 | |
| 114 | L | A | -0.7347 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.0346 | |
| 117 | T | A | -0.8629 | |
| 118 | E | A | -1.8357 | |
| 119 | N | A | -1.9840 | |
| 120 | P | A | -1.3032 | |
| 121 | T | A | -0.7026 | |
| 122 | A | A | -0.4088 | |
| 123 | P | A | -0.4668 | |
| 124 | V | A | -0.4175 | |
| 125 | H | A | -0.9214 | |
| 126 | P | A | -1.2657 | |
| 127 | G | A | -1.4803 | |
| 128 | P | A | -1.5076 | |
| 129 | D | A | -2.3390 | |
| 130 | D | A | -1.8091 | |
| 131 | R | A | -1.1501 | |
| 132 | V | A | 0.2283 | |
| 133 | A | A | 0.4263 | |
| 134 | F | A | 0.2668 | |
| 135 | S | A | -0.0711 | |
| 136 | Y | A | 0.0000 | |
| 137 | D | A | -0.6748 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5567 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2681 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1752 | |
| 157 | D | A | 0.6011 | |
| 158 | I | A | 1.2604 | |
| 159 | A | A | 0.9346 | |
| 160 | P | A | 0.0788 | |
| 161 | P | A | 0.4302 | |
| 162 | C | A | 0.4975 | |
| 163 | P | A | 0.0090 | |
| 164 | G | A | -0.0788 | |
| 165 | L | A | 0.5871 | |
| 166 | P | A | -0.1022 | |
| 167 | P | A | -0.3358 | |
| 168 | G | A | -0.4134 | |
| 169 | A | A | 0.3018 | |
| 170 | C | A | 1.0850 | |
| 171 | P | A | 0.7857 | |
| 172 | P | A | 1.1333 | |
| 173 | I | A | 2.3596 | |
| 174 | Q | A | 1.2504 | |
| 175 | L | A | 1.5343 | |
| 176 | V | A | 0.8601 | |
| 177 | N | A | -0.3455 | |
| 178 | S | A | -0.0263 | |
| 179 | V | A | 0.3534 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3628 | |
| 182 | D | A | 0.0665 | |
| 183 | G | A | -0.1597 | |
| 184 | D | A | -0.5647 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1707 | |
| 190 | F | A | 0.0786 | |
| 191 | G | A | -0.0895 | |
| 192 | N | A | -0.2695 | |
| 193 | M | A | -0.1236 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4199 | |
| 197 | E | A | -2.5972 | |
| 198 | L | A | -1.2191 | |
| 199 | Q | A | -2.5657 | |
| 200 | Q | A | -3.3477 | |
| 201 | D | A | -3.6251 | |
| 202 | R | A | -3.3947 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1672 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | 0.0000 | |
| 211 | S | A | -1.9408 | |
| 212 | T | A | -1.5100 | |
| 213 | R | A | -2.1613 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1733 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2593 | |
| 220 | L | A | 0.4441 | |
| 221 | K | A | -1.4227 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9966 | |
| 224 | N | A | -1.7291 | |
| 225 | E | A | -1.3464 | |
| 226 | A | A | -0.8238 | |
| 227 | Y | A | -0.4593 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7254 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1353 | |
| 234 | F | A | 0.0423 | |
| 235 | G | A | -0.9295 | |
| 236 | R | A | -2.7100 | |
| 237 | R | A | -3.0068 | |
| 238 | E | A | -2.2005 | |
| 239 | Q | A | -0.1800 | |
| 240 | V | A | 1.5288 | |
| 241 | Y | A | 1.2329 | |
| 242 | A | A | 0.1977 | |
| 243 | R | A | -1.1590 | |
| 244 | H | A | -0.9689 | |
| 245 | F | A | 0.0861 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.9362 | |
| 249 | S | A | -1.3002 | |
| 250 | G | A | -1.1567 | |
| 251 | P | A | -0.7587 | |
| 252 | D | A | -0.7005 | |
| 253 | G | A | -0.1213 | |
| 254 | V | A | 1.0782 | |
| 255 | P | A | 0.1344 | |
| 256 | P | A | -0.0765 | |
| 257 | P | A | -0.1081 | |
| 258 | A | A | -0.1332 | |
| 259 | A | A | -0.3767 | |
| 260 | P | A | -0.3163 | |
| 261 | P | A | -0.5247 | |
| 262 | P | A | -0.6389 | |
| 263 | P | A | -0.5561 | |
| 264 | P | A | -0.2313 | |
| 265 | T | A | 0.0587 | |
| 266 | Y | A | 0.7728 | |
| 267 | V | A | 1.0001 | |
| 268 | R | A | -0.9128 | |
| 269 | P | A | -0.6928 | |
| 270 | P | A | -0.8805 | |
| 271 | P | A | -0.6689 | |
| 272 | S | A | -0.6213 | |
| 273 | S | A | -0.6433 | |
| 274 | P | A | -0.5357 | |
| 275 | H | A | -0.8037 | |
| 276 | A | A | -0.1750 | |
| 277 | V | A | 0.9713 | |
| 278 | P | A | -0.0782 | |
| 279 | P | A | -0.5595 | |
| 280 | P | A | 0.0000 | |
| 281 | R | A | -1.1477 | |
| 282 | D | A | -1.1102 | |
| 283 | Y | A | 0.5647 | |
| 284 | F | A | 0.5919 | |
| 285 | G | A | 0.2381 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9211 | |
| 291 | L | A | 1.6047 | |
| 292 | V | A | 0.6008 | |
| 293 | S | A | -0.1642 | |
| 294 | S | A | -0.9726 | |
| 295 | D | A | -1.8475 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1582 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6396 | |
| 301 | R | A | -1.9156 | |
| 302 | P | A | -0.9730 | |
| 303 | F | A | -0.1736 | |
| 304 | W | A | -0.5079 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0706 | |
| 307 | R | A | -2.9193 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7836 | |
| 310 | G | A | -1.4229 | |
| 311 | N | A | -1.3894 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9112 | |
| 319 | N | A | -0.8894 | |
| 320 | E | A | -1.0477 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3702 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1718 | |
| 333 | N | A | 0.4209 | |
| 334 | F | A | 1.4855 | |
| 335 | T | A | 0.7514 | |
| 336 | I | A | 0.3958 | |
| 337 | S | A | -0.8600 | |
| 338 | Q | A | -1.4898 | |
| 339 | Q | A | -0.9011 | |
| 340 | L | A | 0.8114 | |
| 341 | C | A | 0.4558 | |
| 342 | T | A | 0.1780 | |
| 343 | P | A | -0.2525 | |
| 344 | P | A | -0.0683 | |
| 345 | I | A | 0.5749 | |
| 346 | N | A | -0.0344 | |
| 347 | V | A | 1.7158 | |
| 348 | Y | A | 1.5873 | |
| 349 | D | A | 0.0742 | |
| 350 | P | A | -0.3467 | |
| 351 | S | A | -0.2898 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.6057 | |
| 354 | K | A | -1.7235 | |
| 355 | N | A | -1.7186 | |
| 356 | Y | A | -0.0956 | |
| 357 | L | A | 0.5928 | |
| 358 | R | A | 0.9554 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4712 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0115 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9209 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6630 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3075 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3220 | |
| 376 | L | A | -1.7547 | |
| 377 | D | A | -2.0362 | |
| 378 | P | A | -1.0652 | |
| 379 | G | A | -1.0180 | |
| 380 | V | A | -0.9264 | |
| 381 | L | A | -0.5390 | |
| 382 | A | A | -0.6564 | |
| 383 | H | A | -0.8376 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3855 | |
| 386 | T | A | -0.5644 | |
| 387 | M | A | -0.3230 | |
| 388 | N | A | -0.8587 | |
| 389 | P | A | -1.2682 | |
| 390 | T | A | -1.5258 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5213 | |
| 393 | E | A | -2.9125 | |
| 394 | N | A | -2.6543 | |
| 395 | W | A | -1.5032 | |
| 396 | N | A | -1.3364 | |
| 397 | L | A | -0.2346 | |
| 398 | G | A | 0.5425 | |
| 399 | F | A | 2.4278 | |
| 400 | V | A | 1.8552 | |
| 401 | P | A | 0.0635 | |
| 402 | P | A | -1.8274 | |
| 403 | K | A | -3.4992 | |
| 404 | E | A | -3.8327 | |
| 405 | R | A | -4.0900 | |
| 406 | E | A | -3.8387 | |
| 407 | D | A | -2.8947 | |
| 408 | P | A | -1.7721 | |
| 409 | Y | A | -0.9968 | |
| 410 | K | A | -2.1033 | |
| 411 | G | A | -0.6443 | |
| 412 | L | A | 0.6536 | |
| 413 | I | A | 1.5730 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4034 | |
| 416 | E | A | -1.6745 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9426 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0879 | |
| 421 | E | A | -2.8198 | |
| 422 | R | A | -2.6458 | |
| 423 | F | A | -1.3309 | |
| 424 | S | A | -1.4782 | |
| 425 | Q | A | -1.7438 | |
| 426 | D | A | -2.8955 | |
| 427 | L | A | -1.9911 | |
| 428 | D | A | -2.7944 | |
| 429 | Q | A | -2.6209 | |
| 430 | F | A | -1.4314 | |
| 431 | A | A | -0.8874 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5486 | |
| 435 | K | A | -0.6985 | |
| 436 | F | A | 0.1801 | |
| 437 | L | A | 1.0504 | |
| 438 | Y | A | 0.8442 | |
| 439 | Q | A | -0.2627 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine