| Chain sequence(s) |
V: EVQLVESGGGLVQAGGSLRLSCAASGFTFDDYAIGWFRQAPGKGREGVLCIRIFDRHTYSADSVKGRFTISSDNAQNTVYLHMNSLKPEDTAVYYCAAGSFWACTRPEGAMDYWGKGTQVTVS
input PDB |
| Selected Chain(s) | V |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with V chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:00)
[INFO] Main: Simulation completed successfully. (00:01:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | V | -2.0750 | |
| 2 | V | V | -1.1338 | |
| 3 | Q | V | -1.0557 | |
| 4 | L | V | 0.0000 | |
| 5 | V | V | 1.0094 | |
| 6 | E | V | -0.0910 | |
| 7 | S | V | -0.5070 | |
| 8 | G | V | -1.0492 | |
| 9 | G | V | -0.8724 | |
| 10 | G | V | 0.0773 | |
| 11 | L | V | 0.9317 | |
| 12 | V | V | 0.0000 | |
| 13 | Q | V | -1.3093 | |
| 14 | A | V | -1.4371 | |
| 15 | G | V | -1.3694 | |
| 16 | G | V | -1.1153 | |
| 17 | S | V | -1.2822 | |
| 18 | L | V | -0.9046 | |
| 19 | R | V | -2.0379 | |
| 20 | L | V | 0.0000 | |
| 21 | S | V | -0.4147 | |
| 22 | C | V | 0.0000 | |
| 23 | A | V | -0.1192 | |
| 24 | A | V | 0.0000 | |
| 25 | S | V | -0.9379 | |
| 26 | G | V | -1.1520 | |
| 27 | F | V | -0.9069 | |
| 28 | T | V | -1.1697 | |
| 29 | F | V | 0.0000 | |
| 30 | D | V | -2.7160 | |
| 31 | D | V | -2.2963 | |
| 32 | Y | V | -1.3273 | |
| 33 | A | V | 0.0000 | |
| 34 | I | V | 0.0000 | |
| 35 | G | V | 0.0000 | |
| 36 | W | V | 0.0000 | |
| 37 | F | V | -0.3995 | |
| 38 | R | V | 0.0000 | |
| 39 | Q | V | -1.7735 | |
| 40 | A | V | -1.7050 | |
| 41 | P | V | -1.2351 | |
| 42 | G | V | -1.6725 | |
| 43 | K | V | -2.7042 | |
| 44 | G | V | -2.3399 | |
| 45 | R | V | -2.4297 | |
| 46 | E | V | -2.2765 | |
| 47 | G | V | -1.2766 | |
| 48 | V | V | 0.0000 | |
| 49 | L | V | 0.0000 | |
| 50 | C | V | 0.0000 | |
| 51 | I | V | 0.0000 | |
| 52 | R | V | -2.7552 | |
| 53 | I | V | 0.0000 | |
| 54 | F | V | -1.1889 | |
| 55 | D | V | -2.7358 | |
| 56 | R | V | -3.3020 | |
| 57 | H | V | -2.4876 | |
| 58 | T | V | -1.2268 | |
| 59 | Y | V | -0.2205 | |
| 60 | S | V | -0.6941 | |
| 61 | A | V | -1.4773 | |
| 62 | D | V | -2.4939 | |
| 63 | S | V | -1.8922 | |
| 64 | V | V | 0.0000 | |
| 65 | K | V | -2.6543 | |
| 66 | G | V | -1.8690 | |
| 67 | R | V | -1.4899 | |
| 68 | F | V | 0.0000 | |
| 69 | T | V | -0.7822 | |
| 70 | I | V | 0.0000 | |
| 71 | S | V | -0.8953 | |
| 72 | S | V | 0.0000 | |
| 73 | D | V | -1.7264 | |
| 74 | N | V | -2.2449 | |
| 75 | A | V | -1.4533 | |
| 76 | Q | V | -2.0152 | |
| 77 | N | V | -1.9825 | |
| 78 | T | V | 0.0000 | |
| 79 | V | V | 0.0000 | |
| 80 | Y | V | -0.5079 | |
| 81 | L | V | 0.0000 | |
| 82 | H | V | -1.0806 | |
| 83 | M | V | 0.0000 | |
| 84 | N | V | -1.5427 | |
| 85 | S | V | -1.2924 | |
| 86 | L | V | 0.0000 | |
| 87 | K | V | -2.1992 | |
| 88 | P | V | -1.8307 | |
| 89 | E | V | -2.2795 | |
| 90 | D | V | 0.0000 | |
| 91 | T | V | -0.9157 | |
| 92 | A | V | 0.0000 | |
| 93 | V | V | -0.6817 | |
| 94 | Y | V | 0.0000 | |
| 95 | Y | V | -0.3052 | |
| 96 | C | V | 0.0000 | |
| 97 | A | V | 0.0000 | |
| 98 | A | V | 0.0000 | |
| 99 | G | V | 0.0000 | |
| 100 | S | V | -0.3381 | |
| 101 | F | V | 0.3258 | |
| 102 | W | V | 0.8059 | |
| 103 | A | V | -0.1770 | |
| 104 | C | V | 0.0000 | |
| 105 | T | V | -0.0061 | |
| 106 | R | V | -1.0965 | |
| 107 | P | V | -1.8403 | |
| 108 | E | V | -2.0192 | |
| 109 | G | V | -1.1598 | |
| 110 | A | V | -0.7263 | |
| 111 | M | V | -0.5663 | |
| 112 | D | V | -1.3556 | |
| 113 | Y | V | -0.1832 | |
| 114 | W | V | 0.2135 | |
| 115 | G | V | -0.1757 | |
| 116 | K | V | -1.4278 | |
| 117 | G | V | 0.0000 | |
| 118 | T | V | -0.8735 | |
| 119 | Q | V | -1.2536 | |
| 120 | V | V | 0.0000 | |
| 121 | T | V | -0.4044 | |
| 122 | V | V | 0.0000 | |
| 123 | S | V | -0.9105 |