| Chain sequence(s) |
A: MSHHHHHHSGMMSELAKEIEELAKELAVHHTEYHRDTPDTVLHMYYVMDENDELWVVEVTVDGEGNSEVRMYNWNHEELSPEEALEKLKELKEKSKNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:39)
[INFO] Main: Simulation completed successfully. (00:03:40)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5466 | |
| 2 | S | A | -0.6341 | |
| 3 | H | A | -1.7556 | |
| 4 | H | A | -2.3675 | |
| 5 | H | A | -2.7774 | |
| 6 | H | A | -2.7916 | |
| 7 | H | A | -2.5324 | |
| 8 | H | A | -2.2103 | |
| 9 | S | A | -1.3109 | |
| 10 | G | A | -1.1237 | |
| 11 | M | A | 0.0010 | |
| 12 | M | A | -0.8430 | |
| 13 | S | A | -1.2946 | |
| 14 | E | A | -2.2427 | |
| 15 | L | A | -1.7907 | |
| 16 | A | A | 0.0000 | |
| 17 | K | A | -2.6986 | |
| 18 | E | A | -2.8191 | |
| 19 | I | A | 0.0000 | |
| 20 | E | A | 0.0000 | |
| 21 | E | A | -3.4086 | |
| 22 | L | A | -2.5492 | |
| 23 | A | A | 0.0000 | |
| 24 | K | A | -3.1829 | |
| 25 | E | A | -2.7931 | |
| 26 | L | A | -1.1933 | |
| 27 | A | A | -0.4446 | |
| 28 | V | A | 0.6693 | |
| 29 | H | A | -0.6437 | |
| 30 | H | A | -1.5963 | |
| 31 | T | A | -1.2549 | |
| 32 | E | A | -1.9104 | |
| 33 | Y | A | -1.0005 | |
| 34 | H | A | -2.5491 | |
| 35 | R | A | -3.4855 | |
| 36 | D | A | -3.1424 | |
| 37 | T | A | -2.3962 | |
| 38 | P | A | -2.3510 | |
| 39 | D | A | -3.2701 | |
| 40 | T | A | 0.0000 | |
| 41 | V | A | -1.5254 | |
| 42 | L | A | -0.8850 | |
| 43 | H | A | -0.9663 | |
| 44 | M | A | -0.9376 | |
| 45 | Y | A | 0.0000 | |
| 46 | Y | A | 0.2893 | |
| 47 | V | A | 0.0000 | |
| 48 | M | A | -0.6632 | |
| 49 | D | A | -2.4606 | |
| 50 | E | A | -3.5601 | |
| 51 | N | A | -3.2238 | |
| 52 | D | A | -3.2074 | |
| 53 | E | A | -2.0616 | |
| 54 | L | A | -0.4373 | |
| 55 | W | A | 0.0000 | |
| 56 | V | A | 0.0000 | |
| 57 | V | A | 0.0000 | |
| 58 | E | A | -1.0583 | |
| 59 | V | A | 0.0000 | |
| 60 | T | A | -1.1363 | |
| 61 | V | A | -1.1494 | |
| 62 | D | A | -2.4479 | |
| 63 | G | A | -2.4554 | |
| 64 | E | A | -2.6270 | |
| 65 | G | A | -1.5749 | |
| 66 | N | A | -1.3695 | |
| 67 | S | A | -1.1666 | |
| 68 | E | A | -1.9043 | |
| 69 | V | A | 0.0000 | |
| 70 | R | A | -1.9326 | |
| 71 | M | A | 0.0000 | |
| 72 | Y | A | -1.6652 | |
| 73 | N | A | 0.0000 | |
| 74 | W | A | -0.3224 | |
| 75 | N | A | -1.9071 | |
| 76 | H | A | -2.4564 | |
| 77 | E | A | -3.1087 | |
| 78 | E | A | -3.2358 | |
| 79 | L | A | -2.4704 | |
| 80 | S | A | -2.0223 | |
| 81 | P | A | -2.3683 | |
| 82 | E | A | -3.1074 | |
| 83 | E | A | -3.6592 | |
| 84 | A | A | 0.0000 | |
| 85 | L | A | -2.6195 | |
| 86 | E | A | -3.8450 | |
| 87 | K | A | -2.9135 | |
| 88 | L | A | 0.0000 | |
| 89 | K | A | -3.5634 | |
| 90 | E | A | -4.1902 | |
| 91 | L | A | 0.0000 | |
| 92 | K | A | -3.7280 | |
| 93 | E | A | -4.4072 | |
| 94 | K | A | -4.2203 | |
| 95 | S | A | -3.3363 | |
| 96 | K | A | -3.5525 | |
| 97 | N | A | -3.1367 | |
| 98 | S | A | -1.9241 |