Project name: 2_29_CLas_Aggrescan3D_10Armstrong_distance

Status: done

Started: 2026-05-07 20:22:23
Settings
Chain sequence(s) A: IRTFLFQPSVIPSGSMIPTLLVGDYIIVNKFSYGYSKYSFPFSYNLFNGRIFNNQPRRGDVVVFRYPKDPSIDYVKRVIGLPGDRISLEKGIIYINGAPVVRHMEGYFSYHYKEDWSSNVPIFQEKLSNGVLYNVLSQDFLAPSSNISEFLVPKGHYFMMGDNRDKSKDSRWVEVGFVPEENLVGRASFVLFSIGGDTPFSKVWLWIPNMRWDRLFKIL
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:08)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:09)
Show buried residues

Minimal score value
-2.9248
Maximal score value
2.7276
Average score
-0.0781
Total score value
-17.0955

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 I A 1.1716
2 R A -0.2507
3 T A 0.9494
4 F A 2.2747
5 L A 2.1836
6 F A 1.7235
7 Q A 0.5756
8 P A 0.5114
9 S A 0.4928
10 V A 1.2907
11 I A 0.0000
12 P A -0.0906
13 S A -0.4602
14 G A 0.0000
15 S A -0.6877
16 M A 0.0000
17 I A 0.0000
18 P A 0.0037
19 T A -0.0821
20 L A 0.0000
21 L A 0.3067
22 V A -0.0531
23 G A 0.1369
24 D A 0.0000
25 Y A 1.2563
26 I A 0.0000
27 I A 1.0903
28 V A 0.0000
29 N A 0.8141
30 K A 0.0000
31 F A 2.0373
32 S A 0.3407
33 Y A 0.0000
34 G A 0.0000
35 Y A 0.0000
36 S A 0.0000
37 K A 0.1992
38 Y A 0.1631
39 S A 0.0000
40 F A 1.1920
41 P A 1.0234
42 F A 2.1271
43 S A 1.3288
44 Y A 1.7912
45 N A 0.2287
46 L A 1.3881
47 F A 0.6765
48 N A -0.9855
49 G A -1.0751
50 R A -0.1714
51 I A 1.2184
52 F A 1.8324
53 N A -0.3285
54 N A -0.9621
55 Q A -1.6114
56 P A 0.0000
57 R A -2.3720
58 R A -1.4674
59 G A 0.0000
60 D A -1.0018
61 V A 0.0000
62 V A 0.0000
63 V A 0.0000
64 F A 0.0000
65 R A -1.0981
66 Y A 0.0000
67 P A -1.3584
68 K A -2.1803
69 D A -1.7891
70 P A -1.0629
71 S A -0.6107
72 I A -0.2578
73 D A -1.3501
74 Y A -0.4992
75 V A -0.2354
76 K A 0.0000
77 R A 0.0000
78 V A 0.0000
79 I A 0.0000
80 G A 0.0000
81 L A -0.6126
82 P A -0.8144
83 G A -0.7074
84 D A 0.0000
85 R A -1.2007
86 I A 0.0000
87 S A -1.2826
88 L A 0.0000
89 E A -2.1427
90 K A -1.4579
91 G A 0.0000
92 I A -0.1990
93 I A 0.0000
94 Y A -0.5575
95 I A 0.0000
96 N A -1.6620
97 G A -1.3385
98 A A -0.4405
99 P A -0.2171
100 V A 0.0000
101 V A 0.7641
102 R A -0.4072
103 H A -1.2342
104 M A -0.5926
105 E A -1.5562
106 G A -0.2806
107 Y A 0.8404
108 F A 0.3881
109 S A -0.1580
110 Y A 0.0000
111 H A -1.4236
112 Y A -1.8315
113 K A -2.9248
114 E A -2.8059
115 D A -1.4558
116 W A -0.1788
117 S A -0.0696
118 S A -0.4771
119 N A -0.8843
120 V A -0.3155
121 P A 0.0000
122 I A -0.2132
123 F A -0.6238
124 Q A -0.9890
125 E A 0.0000
126 K A -1.0242
127 L A 0.0000
128 S A -0.9126
129 N A -1.7995
130 G A -1.0010
131 V A -0.2611
132 L A 0.3804
133 Y A 0.0000
134 N A -0.7784
135 V A 0.0000
136 L A 0.0000
137 S A 0.0000
138 Q A -1.8276
139 D A -1.5464
140 F A -0.5503
141 L A 0.5963
142 A A -0.1487
143 P A -0.3449
144 S A -0.6388
145 S A 0.0000
146 N A -1.2132
147 I A -1.0949
148 S A -1.3593
149 E A -1.9444
150 F A -0.1404
151 L A 0.5652
152 V A 0.0000
153 P A -0.6325
154 K A -1.7933
155 G A -1.3313
156 H A -0.9591
157 Y A 0.0000
158 F A 0.0000
159 M A 0.0000
160 M A 0.0000
161 G A 0.0000
162 D A 0.0000
163 N A 0.0000
164 R A 0.0000
165 D A -2.1809
166 K A -1.7832
167 S A 0.0000
168 K A -1.0224
169 D A 0.0000
170 S A 0.0000
171 R A 0.3007
172 W A 1.0684
173 V A 1.7669
174 E A 0.0255
175 V A 0.0000
176 G A 0.4508
177 F A 0.5061
178 V A 0.0000
179 P A -0.7342
180 E A -1.2348
181 E A -1.2605
182 N A 0.0000
183 L A 0.0000
184 V A 0.0000
185 G A 0.0000
186 R A -0.4043
187 A A 0.0000
188 S A 0.8103
189 F A 1.7847
190 V A 0.0000
191 L A 1.9366
192 F A 1.2430
193 S A 0.0000
194 I A 0.0000
195 G A 0.0000
196 G A -1.4473
197 D A -2.0161
198 T A -0.2749
199 P A 0.0570
200 F A 1.2065
201 S A 0.6190
202 K A 0.7798
203 V A 2.6909
204 W A 2.5354
205 L A 1.9774
206 W A 2.1185
207 I A 2.7276
208 P A 0.8610
209 N A 0.3114
210 M A 0.6776
211 R A -0.0412
212 W A 0.7103
213 D A -1.0766
214 R A 0.2614
215 L A 1.5285
216 F A 2.6245
217 K A 1.3512
218 I A 2.5793
219 L A 1.4060
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Laboratory of Theory of Biopolymers 2018