Project name: query_structure

Status: done

Started: 2026-03-17 00:14:15
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Chain sequence(s) A: MSEETATSDNDNSYARVRAVVMTRDDSSGGWLPLGGSGLSSVTVFKVPHQEENGCADFFIRGERLRDKMVVLECMLKKDLIYNKVTPTFHHWKIDDKKFGLRFQSPADARAFDRGIRRAIEDISQGC
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:18)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:18)
Show buried residues

Minimal score value
-3.9077
Maximal score value
0.7932
Average score
-1.2041
Total score value
-152.9171

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.2323
2 S A -1.0427
3 E A -2.5597
4 E A -2.7051
5 T A -1.6177
6 A A -1.0924
7 T A -1.2456
8 S A -2.0362
9 D A -3.0731
10 N A -3.2927
11 D A -3.1249
12 N A -2.0148
13 S A -1.6928
14 Y A -1.5409
15 A A 0.0000
16 R A -2.1434
17 V A 0.0000
18 R A -2.1258
19 A A 0.0000
20 V A 0.0000
21 V A 0.0000
22 M A 0.0000
23 T A -0.6747
24 R A -1.6959
25 D A -1.7672
26 D A -2.5619
27 S A -1.5766
28 S A -1.2253
29 G A -1.4313
30 G A -0.8598
31 W A -0.3568
32 L A 0.4829
33 P A 0.0943
34 L A 0.2902
35 G A 0.1142
36 G A -0.2522
37 S A -0.2123
38 G A -0.6581
39 L A -0.7384
40 S A 0.0000
41 S A -1.3789
42 V A 0.0000
43 T A 0.0000
44 V A 0.0000
45 F A 0.0000
46 K A -0.5668
47 V A -0.0116
48 P A -1.1642
49 H A -2.3626
50 Q A -2.9405
51 E A -3.9077
52 E A -3.6946
53 N A -2.8991
54 G A -2.0897
55 C A -0.7077
56 A A -0.6844
57 D A -0.4530
58 F A 0.0000
59 F A -0.3196
60 I A 0.0000
61 R A -1.4666
62 G A 0.0000
63 E A -1.4902
64 R A -1.6034
65 L A -1.6255
66 R A -2.9016
67 D A -3.0089
68 K A -2.5626
69 M A -0.7040
70 V A 0.1355
71 V A -0.0746
72 L A 0.0000
73 E A -1.7193
74 C A -1.0296
75 M A -0.2825
76 L A 0.0000
77 K A -2.3534
78 K A -3.0572
79 D A -2.8282
80 L A -1.2984
81 I A 0.0407
82 Y A -0.1552
83 N A -0.5233
84 K A -1.0747
85 V A 0.7932
86 T A 0.0048
87 P A -0.8861
88 T A -1.0783
89 F A -0.5661
90 H A 0.0000
91 H A -0.5088
92 W A 0.0000
93 K A -2.0660
94 I A 0.0000
95 D A -3.5645
96 D A -3.7513
97 K A -3.6244
98 K A -2.5421
99 F A 0.0000
100 G A 0.0000
101 L A 0.0000
102 R A -1.7010
103 F A 0.0000
104 Q A -1.8709
105 S A -1.4531
106 P A -1.2343
107 A A -1.1055
108 D A -2.1722
109 A A 0.0000
110 R A -2.4512
111 A A -1.8224
112 F A 0.0000
113 D A 0.0000
114 R A -2.9570
115 G A 0.0000
116 I A 0.0000
117 R A -3.3451
118 R A -3.2483
119 A A 0.0000
120 I A -2.9103
121 E A -3.4280
122 D A -2.3818
123 I A -1.8133
124 S A -1.9525
125 Q A -1.6992
126 G A -0.8637
127 C A 0.1501
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Laboratory of Theory of Biopolymers 2018