| Chain sequence(s) |
A: MSEETATSDNDNSYARVRAVVMTRDDSSGGWLPLGGSGLSSVTVFKVPHQEENGCADFFIRGERLRDKMVVLECMLKKDLIYNKVTPTFHHWKIDDKKFGLRFQSPADARAFDRGIRRAIEDISQGC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:18)
[INFO] Main: Simulation completed successfully. (00:02:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.2323 | |
| 2 | S | A | -1.0427 | |
| 3 | E | A | -2.5597 | |
| 4 | E | A | -2.7051 | |
| 5 | T | A | -1.6177 | |
| 6 | A | A | -1.0924 | |
| 7 | T | A | -1.2456 | |
| 8 | S | A | -2.0362 | |
| 9 | D | A | -3.0731 | |
| 10 | N | A | -3.2927 | |
| 11 | D | A | -3.1249 | |
| 12 | N | A | -2.0148 | |
| 13 | S | A | -1.6928 | |
| 14 | Y | A | -1.5409 | |
| 15 | A | A | 0.0000 | |
| 16 | R | A | -2.1434 | |
| 17 | V | A | 0.0000 | |
| 18 | R | A | -2.1258 | |
| 19 | A | A | 0.0000 | |
| 20 | V | A | 0.0000 | |
| 21 | V | A | 0.0000 | |
| 22 | M | A | 0.0000 | |
| 23 | T | A | -0.6747 | |
| 24 | R | A | -1.6959 | |
| 25 | D | A | -1.7672 | |
| 26 | D | A | -2.5619 | |
| 27 | S | A | -1.5766 | |
| 28 | S | A | -1.2253 | |
| 29 | G | A | -1.4313 | |
| 30 | G | A | -0.8598 | |
| 31 | W | A | -0.3568 | |
| 32 | L | A | 0.4829 | |
| 33 | P | A | 0.0943 | |
| 34 | L | A | 0.2902 | |
| 35 | G | A | 0.1142 | |
| 36 | G | A | -0.2522 | |
| 37 | S | A | -0.2123 | |
| 38 | G | A | -0.6581 | |
| 39 | L | A | -0.7384 | |
| 40 | S | A | 0.0000 | |
| 41 | S | A | -1.3789 | |
| 42 | V | A | 0.0000 | |
| 43 | T | A | 0.0000 | |
| 44 | V | A | 0.0000 | |
| 45 | F | A | 0.0000 | |
| 46 | K | A | -0.5668 | |
| 47 | V | A | -0.0116 | |
| 48 | P | A | -1.1642 | |
| 49 | H | A | -2.3626 | |
| 50 | Q | A | -2.9405 | |
| 51 | E | A | -3.9077 | |
| 52 | E | A | -3.6946 | |
| 53 | N | A | -2.8991 | |
| 54 | G | A | -2.0897 | |
| 55 | C | A | -0.7077 | |
| 56 | A | A | -0.6844 | |
| 57 | D | A | -0.4530 | |
| 58 | F | A | 0.0000 | |
| 59 | F | A | -0.3196 | |
| 60 | I | A | 0.0000 | |
| 61 | R | A | -1.4666 | |
| 62 | G | A | 0.0000 | |
| 63 | E | A | -1.4902 | |
| 64 | R | A | -1.6034 | |
| 65 | L | A | -1.6255 | |
| 66 | R | A | -2.9016 | |
| 67 | D | A | -3.0089 | |
| 68 | K | A | -2.5626 | |
| 69 | M | A | -0.7040 | |
| 70 | V | A | 0.1355 | |
| 71 | V | A | -0.0746 | |
| 72 | L | A | 0.0000 | |
| 73 | E | A | -1.7193 | |
| 74 | C | A | -1.0296 | |
| 75 | M | A | -0.2825 | |
| 76 | L | A | 0.0000 | |
| 77 | K | A | -2.3534 | |
| 78 | K | A | -3.0572 | |
| 79 | D | A | -2.8282 | |
| 80 | L | A | -1.2984 | |
| 81 | I | A | 0.0407 | |
| 82 | Y | A | -0.1552 | |
| 83 | N | A | -0.5233 | |
| 84 | K | A | -1.0747 | |
| 85 | V | A | 0.7932 | |
| 86 | T | A | 0.0048 | |
| 87 | P | A | -0.8861 | |
| 88 | T | A | -1.0783 | |
| 89 | F | A | -0.5661 | |
| 90 | H | A | 0.0000 | |
| 91 | H | A | -0.5088 | |
| 92 | W | A | 0.0000 | |
| 93 | K | A | -2.0660 | |
| 94 | I | A | 0.0000 | |
| 95 | D | A | -3.5645 | |
| 96 | D | A | -3.7513 | |
| 97 | K | A | -3.6244 | |
| 98 | K | A | -2.5421 | |
| 99 | F | A | 0.0000 | |
| 100 | G | A | 0.0000 | |
| 101 | L | A | 0.0000 | |
| 102 | R | A | -1.7010 | |
| 103 | F | A | 0.0000 | |
| 104 | Q | A | -1.8709 | |
| 105 | S | A | -1.4531 | |
| 106 | P | A | -1.2343 | |
| 107 | A | A | -1.1055 | |
| 108 | D | A | -2.1722 | |
| 109 | A | A | 0.0000 | |
| 110 | R | A | -2.4512 | |
| 111 | A | A | -1.8224 | |
| 112 | F | A | 0.0000 | |
| 113 | D | A | 0.0000 | |
| 114 | R | A | -2.9570 | |
| 115 | G | A | 0.0000 | |
| 116 | I | A | 0.0000 | |
| 117 | R | A | -3.3451 | |
| 118 | R | A | -3.2483 | |
| 119 | A | A | 0.0000 | |
| 120 | I | A | -2.9103 | |
| 121 | E | A | -3.4280 | |
| 122 | D | A | -2.3818 | |
| 123 | I | A | -1.8133 | |
| 124 | S | A | -1.9525 | |
| 125 | Q | A | -1.6992 | |
| 126 | G | A | -0.8637 | |
| 127 | C | A | 0.1501 |