| Chain sequence(s) |
A: LPAPKNLVVSRVTEDSARLSWTAPDAAFDSFAIGYWEWDDDGEAIVLTVPGSERSYDLTGLKPGTEYPVYIAGVKGGQWSFPLSAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:35)
[INFO] Main: Simulation completed successfully. (00:00:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 1.0078 | |
| 2 | P | A | 0.5164 | |
| 3 | A | A | 0.5146 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -1.9900 | |
| 6 | N | A | -1.3237 | |
| 7 | L | A | -0.0747 | |
| 8 | V | A | 1.1438 | |
| 9 | V | A | 0.6549 | |
| 10 | S | A | -0.6079 | |
| 11 | R | A | -1.9917 | |
| 12 | V | A | -0.9685 | |
| 13 | T | A | -1.7507 | |
| 14 | E | A | -3.0123 | |
| 15 | D | A | -2.6559 | |
| 16 | S | A | -2.0204 | |
| 17 | A | A | 0.0000 | |
| 18 | R | A | -1.1969 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.3880 | |
| 21 | W | A | 0.0000 | |
| 22 | T | A | -1.2917 | |
| 23 | A | A | -1.4209 | |
| 24 | P | A | -1.3428 | |
| 25 | D | A | -2.2697 | |
| 26 | A | A | -1.4539 | |
| 27 | A | A | -1.1206 | |
| 28 | F | A | 0.0000 | |
| 29 | D | A | -2.6329 | |
| 30 | S | A | -1.3088 | |
| 31 | F | A | 0.0000 | |
| 32 | A | A | 0.0000 | |
| 33 | I | A | 0.0000 | |
| 34 | G | A | 0.0000 | |
| 35 | Y | A | 1.1348 | |
| 36 | W | A | -0.1081 | |
| 37 | E | A | -1.5498 | |
| 38 | W | A | -0.5192 | |
| 39 | D | A | -2.5412 | |
| 40 | D | A | -3.2267 | |
| 41 | D | A | -3.2177 | |
| 42 | G | A | -2.5366 | |
| 43 | E | A | -2.0713 | |
| 44 | A | A | -0.1684 | |
| 45 | I | A | 1.3269 | |
| 46 | V | A | 1.9836 | |
| 47 | L | A | 1.2938 | |
| 48 | T | A | 0.3833 | |
| 49 | V | A | 0.0000 | |
| 50 | P | A | -1.1074 | |
| 51 | G | A | 0.0000 | |
| 52 | S | A | -1.5946 | |
| 53 | E | A | -1.4917 | |
| 54 | R | A | -1.1264 | |
| 55 | S | A | -0.6436 | |
| 56 | Y | A | -0.7149 | |
| 57 | D | A | -1.6438 | |
| 58 | L | A | 0.0000 | |
| 59 | T | A | -1.3251 | |
| 60 | G | A | -1.4726 | |
| 61 | L | A | 0.0000 | |
| 62 | K | A | -2.9600 | |
| 63 | P | A | -2.5687 | |
| 64 | G | A | -1.8052 | |
| 65 | T | A | -1.9153 | |
| 66 | E | A | -1.0548 | |
| 67 | Y | A | 0.0000 | |
| 68 | P | A | 0.0000 | |
| 69 | V | A | 0.0000 | |
| 70 | Y | A | 1.0423 | |
| 71 | I | A | 0.0000 | |
| 72 | A | A | 0.0000 | |
| 73 | G | A | 0.0000 | |
| 74 | V | A | -0.6403 | |
| 75 | K | A | -1.8477 | |
| 76 | G | A | -1.6756 | |
| 77 | G | A | -1.4944 | |
| 78 | Q | A | -1.2959 | |
| 79 | W | A | 0.8126 | |
| 80 | S | A | 0.0000 | |
| 81 | F | A | 2.3894 | |
| 82 | P | A | 1.0964 | |
| 83 | L | A | 0.3411 | |
| 84 | S | A | 0.7905 | |
| 85 | A | A | 1.3472 | |
| 86 | I | A | 2.0453 | |
| 87 | F | A | 0.0000 | |
| 88 | T | A | -0.5464 | |
| 89 | T | A | -1.8378 |