Project name: 2HBS-D

Status: done

Started: 2026-01-14 06:31:59
Settings
Chain sequence(s) D: VHLTPVEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAHGKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFTPPVQAAYQKVVAGVANALAHKYH
input PDB
Selected Chain(s) D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with D chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:46)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:47)
Show buried residues

Minimal score value
-3.6044
Maximal score value
1.3989
Average score
-1.0198
Total score value
-148.8913

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V D 0.8507
2 H D -0.5983
3 L D 0.0000
4 T D -0.1030
5 P D 0.1698
6 V D 1.2617
7 E D -0.2003
8 K D -0.7244
9 S D 0.0513
10 A D 0.0659
11 V D 0.0000
12 T D -0.4999
13 A D -0.4546
14 L D -0.7136
15 W D 0.0000
16 G D -1.3074
17 K D -1.9545
18 V D -1.7319
19 N D -2.3692
20 V D -2.2921
21 D D -3.6044
22 E D -3.4281
23 V D 0.0000
24 G D 0.0000
25 G D -2.8389
26 E D -2.4267
27 A D 0.0000
28 L D 0.0000
29 G D 0.0000
30 R D -0.7339
31 L D 0.0000
32 L D 0.0000
33 V D 0.4368
34 V D 1.3989
35 Y D 1.0867
36 P D 0.1825
37 W D 0.2197
38 T D 0.0000
39 Q D -1.1625
40 R D -2.0570
41 F D -0.7640
42 F D -1.5523
43 E D -2.5718
44 S D -1.6841
45 F D -1.5010
46 G D -2.0262
47 D D -2.5561
48 L D 0.0000
49 S D -1.1317
50 T D -1.0641
51 P D -1.0436
52 D D -2.1268
53 A D -1.6053
54 V D 0.0000
55 M D -1.5036
56 G D -1.6943
57 N D 0.0000
58 P D -1.5905
59 K D -2.3541
60 V D 0.0000
61 K D -3.0768
62 A D -2.3632
63 H D -2.0144
64 G D 0.0000
65 K D -3.1628
66 K D -2.3483
67 V D -0.6532
68 L D 0.0000
69 G D -1.4816
70 A D -1.0083
71 F D 0.0000
72 S D -1.1671
73 D D -2.0085
74 G D 0.0000
75 L D 0.0000
76 A D -1.4284
77 H D -2.3192
78 L D -2.0286
79 D D -2.9464
80 N D -3.0636
81 L D 0.0000
82 K D -2.9401
83 G D -2.0647
84 T D -1.6886
85 F D 0.0000
86 A D -0.9882
87 T D -0.4048
88 L D -0.1163
89 S D 0.0000
90 E D -1.7979
91 L D -0.8738
92 H D -1.1972
93 C D -2.1012
94 D D -2.8831
95 K D -2.4311
96 L D -1.1488
97 H D -1.8681
98 V D -1.4966
99 D D -2.0627
100 P D -1.7529
101 E D -2.0866
102 N D 0.0000
103 F D -0.9658
104 R D -1.5251
105 L D -0.4314
106 L D -0.3711
107 G D 0.0000
108 N D -1.0031
109 V D 0.0000
110 L D 0.0000
111 V D 0.0000
112 C D -0.1630
113 V D 0.0000
114 L D 0.0000
115 A D -1.2760
116 H D -1.6916
117 H D -1.6438
118 F D -1.8211
119 G D -2.2598
120 K D -2.9783
121 E D -2.9679
122 F D 0.0000
123 T D -1.3998
124 P D -0.9688
125 P D -0.4003
126 V D -0.5842
127 Q D -1.1886
128 A D -0.8131
129 A D 0.0000
130 Y D 0.0000
131 Q D -1.3653
132 K D -0.8496
133 V D 0.0000
134 V D 0.0000
135 A D -0.5155
136 G D 0.0000
137 V D 0.0000
138 A D 0.0000
139 N D -1.3648
140 A D 0.0000
141 L D -0.8476
142 A D -1.5435
143 H D -1.9461
144 K D -1.8667
145 Y D -1.4407
146 H D -1.4794
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Laboratory of Theory of Biopolymers 2018