| Chain sequence(s) |
D: VHLTPVEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAHGKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGKEFTPPVQAAYQKVVAGVANALAHKYH
input PDB |
| Selected Chain(s) | D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with D chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:46)
[INFO] Main: Simulation completed successfully. (00:03:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | D | 0.8507 | |
| 2 | H | D | -0.5983 | |
| 3 | L | D | 0.0000 | |
| 4 | T | D | -0.1030 | |
| 5 | P | D | 0.1698 | |
| 6 | V | D | 1.2617 | |
| 7 | E | D | -0.2003 | |
| 8 | K | D | -0.7244 | |
| 9 | S | D | 0.0513 | |
| 10 | A | D | 0.0659 | |
| 11 | V | D | 0.0000 | |
| 12 | T | D | -0.4999 | |
| 13 | A | D | -0.4546 | |
| 14 | L | D | -0.7136 | |
| 15 | W | D | 0.0000 | |
| 16 | G | D | -1.3074 | |
| 17 | K | D | -1.9545 | |
| 18 | V | D | -1.7319 | |
| 19 | N | D | -2.3692 | |
| 20 | V | D | -2.2921 | |
| 21 | D | D | -3.6044 | |
| 22 | E | D | -3.4281 | |
| 23 | V | D | 0.0000 | |
| 24 | G | D | 0.0000 | |
| 25 | G | D | -2.8389 | |
| 26 | E | D | -2.4267 | |
| 27 | A | D | 0.0000 | |
| 28 | L | D | 0.0000 | |
| 29 | G | D | 0.0000 | |
| 30 | R | D | -0.7339 | |
| 31 | L | D | 0.0000 | |
| 32 | L | D | 0.0000 | |
| 33 | V | D | 0.4368 | |
| 34 | V | D | 1.3989 | |
| 35 | Y | D | 1.0867 | |
| 36 | P | D | 0.1825 | |
| 37 | W | D | 0.2197 | |
| 38 | T | D | 0.0000 | |
| 39 | Q | D | -1.1625 | |
| 40 | R | D | -2.0570 | |
| 41 | F | D | -0.7640 | |
| 42 | F | D | -1.5523 | |
| 43 | E | D | -2.5718 | |
| 44 | S | D | -1.6841 | |
| 45 | F | D | -1.5010 | |
| 46 | G | D | -2.0262 | |
| 47 | D | D | -2.5561 | |
| 48 | L | D | 0.0000 | |
| 49 | S | D | -1.1317 | |
| 50 | T | D | -1.0641 | |
| 51 | P | D | -1.0436 | |
| 52 | D | D | -2.1268 | |
| 53 | A | D | -1.6053 | |
| 54 | V | D | 0.0000 | |
| 55 | M | D | -1.5036 | |
| 56 | G | D | -1.6943 | |
| 57 | N | D | 0.0000 | |
| 58 | P | D | -1.5905 | |
| 59 | K | D | -2.3541 | |
| 60 | V | D | 0.0000 | |
| 61 | K | D | -3.0768 | |
| 62 | A | D | -2.3632 | |
| 63 | H | D | -2.0144 | |
| 64 | G | D | 0.0000 | |
| 65 | K | D | -3.1628 | |
| 66 | K | D | -2.3483 | |
| 67 | V | D | -0.6532 | |
| 68 | L | D | 0.0000 | |
| 69 | G | D | -1.4816 | |
| 70 | A | D | -1.0083 | |
| 71 | F | D | 0.0000 | |
| 72 | S | D | -1.1671 | |
| 73 | D | D | -2.0085 | |
| 74 | G | D | 0.0000 | |
| 75 | L | D | 0.0000 | |
| 76 | A | D | -1.4284 | |
| 77 | H | D | -2.3192 | |
| 78 | L | D | -2.0286 | |
| 79 | D | D | -2.9464 | |
| 80 | N | D | -3.0636 | |
| 81 | L | D | 0.0000 | |
| 82 | K | D | -2.9401 | |
| 83 | G | D | -2.0647 | |
| 84 | T | D | -1.6886 | |
| 85 | F | D | 0.0000 | |
| 86 | A | D | -0.9882 | |
| 87 | T | D | -0.4048 | |
| 88 | L | D | -0.1163 | |
| 89 | S | D | 0.0000 | |
| 90 | E | D | -1.7979 | |
| 91 | L | D | -0.8738 | |
| 92 | H | D | -1.1972 | |
| 93 | C | D | -2.1012 | |
| 94 | D | D | -2.8831 | |
| 95 | K | D | -2.4311 | |
| 96 | L | D | -1.1488 | |
| 97 | H | D | -1.8681 | |
| 98 | V | D | -1.4966 | |
| 99 | D | D | -2.0627 | |
| 100 | P | D | -1.7529 | |
| 101 | E | D | -2.0866 | |
| 102 | N | D | 0.0000 | |
| 103 | F | D | -0.9658 | |
| 104 | R | D | -1.5251 | |
| 105 | L | D | -0.4314 | |
| 106 | L | D | -0.3711 | |
| 107 | G | D | 0.0000 | |
| 108 | N | D | -1.0031 | |
| 109 | V | D | 0.0000 | |
| 110 | L | D | 0.0000 | |
| 111 | V | D | 0.0000 | |
| 112 | C | D | -0.1630 | |
| 113 | V | D | 0.0000 | |
| 114 | L | D | 0.0000 | |
| 115 | A | D | -1.2760 | |
| 116 | H | D | -1.6916 | |
| 117 | H | D | -1.6438 | |
| 118 | F | D | -1.8211 | |
| 119 | G | D | -2.2598 | |
| 120 | K | D | -2.9783 | |
| 121 | E | D | -2.9679 | |
| 122 | F | D | 0.0000 | |
| 123 | T | D | -1.3998 | |
| 124 | P | D | -0.9688 | |
| 125 | P | D | -0.4003 | |
| 126 | V | D | -0.5842 | |
| 127 | Q | D | -1.1886 | |
| 128 | A | D | -0.8131 | |
| 129 | A | D | 0.0000 | |
| 130 | Y | D | 0.0000 | |
| 131 | Q | D | -1.3653 | |
| 132 | K | D | -0.8496 | |
| 133 | V | D | 0.0000 | |
| 134 | V | D | 0.0000 | |
| 135 | A | D | -0.5155 | |
| 136 | G | D | 0.0000 | |
| 137 | V | D | 0.0000 | |
| 138 | A | D | 0.0000 | |
| 139 | N | D | -1.3648 | |
| 140 | A | D | 0.0000 | |
| 141 | L | D | -0.8476 | |
| 142 | A | D | -1.5435 | |
| 143 | H | D | -1.9461 | |
| 144 | K | D | -1.8667 | |
| 145 | Y | D | -1.4407 | |
| 146 | H | D | -1.4794 |