| Chain sequence(s) |
A: GKILYEDRGFQGRYECSSDPNLQPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRRGDYADQQWMGLSDSVRSCRLIPSGSRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNEISLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRRVIDFS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:43)
[INFO] Main: Simulation completed successfully. (00:01:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.4177 | |
| 2 | K | A | -2.3482 | |
| 3 | I | A | 0.0000 | |
| 5 | L | A | 0.0000 | |
| 6 | Y | A | -1.6123 | |
| 7 | E | A | 0.0000 | |
| 8 | D | A | -2.6502 | |
| 9 | R | A | -2.7746 | |
| 10 | G | A | -1.7554 | |
| 11 | F | A | -1.5804 | |
| 12 | Q | A | -2.3881 | |
| 13 | G | A | -2.3010 | |
| 14 | R | A | -2.1152 | |
| 16 | Y | A | -0.1737 | |
| 17 | E | A | -1.7290 | |
| 18 | C | A | -1.4063 | |
| 19 | S | A | -1.6335 | |
| 20 | S | A | -1.6013 | |
| 21 | D | A | -2.2405 | |
| 23 | P | A | -2.1357 | |
| 24 | N | A | -2.3251 | |
| 25 | L | A | 0.0000 | |
| 26 | Q | A | -1.6279 | |
| 27 | P | A | -0.4614 | |
| 28 | Y | A | 0.4097 | |
| 29 | L | A | 0.0000 | |
| 30 | S | A | -0.9995 | |
| 31 | R | A | -1.6865 | |
| 32 | C | A | 0.0000 | |
| 33 | N | A | -1.9840 | |
| 34 | S | A | 0.0000 | |
| 35 | A | A | 0.0000 | |
| 36 | R | A | -3.0128 | |
| 37 | V | A | 0.0000 | |
| 38 | D | A | -2.8277 | |
| 39 | S | A | -1.7752 | |
| 40 | G | A | -1.0571 | |
| 41 | C | A | 0.0000 | |
| 42 | W | A | 0.0000 | |
| 43 | M | A | 0.0000 | |
| 44 | L | A | 0.0000 | |
| 45 | Y | A | 0.0000 | |
| 46 | E | A | -1.6703 | |
| 47 | Q | A | -2.2091 | |
| 48 | P | A | -2.0984 | |
| 49 | N | A | -2.0131 | |
| 50 | Y | A | -1.2969 | |
| 51 | S | A | -1.0907 | |
| 52 | G | A | -1.0695 | |
| 53 | L | A | -0.2482 | |
| 54 | Q | A | 0.0000 | |
| 55 | Y | A | 0.0000 | |
| 56 | F | A | 0.2532 | |
| 57 | L | A | 0.0000 | |
| 58 | R | A | -1.4596 | |
| 59 | R | A | -2.3133 | |
| 60 | G | A | -2.3453 | |
| 61 | D | A | -2.9921 | |
| 62 | Y | A | -2.0420 | |
| 63 | A | A | -1.9168 | |
| 64 | D | A | -1.8418 | |
| 66 | Q | A | -1.6176 | |
| 67 | Q | A | -1.6755 | |
| 68 | W | A | 0.0000 | |
| 69 | M | A | 0.2216 | |
| 70 | G | A | 0.0559 | |
| 71 | L | A | 1.0389 | |
| 72 | S | A | -0.5465 | |
| 73 | D | A | -1.9598 | |
| 74 | S | A | 0.0000 | |
| 75 | V | A | 0.0000 | |
| 76 | R | A | -2.1679 | |
| 77 | S | A | 0.0000 | |
| 78 | C | A | 0.0000 | |
| 79 | R | A | -1.0857 | |
| 80 | L | A | -0.6497 | |
| 81 | I | A | 0.0000 | |
| 82 | P | A | -0.3070 | |
| 84 | S | A | -0.8550 | |
| 85 | G | A | -0.9338 | |
| 86 | S | A | -1.3804 | |
| 88 | R | A | -3.1559 | |
| 89 | I | A | 0.0000 | |
| 90 | R | A | -1.3493 | |
| 91 | L | A | 0.0000 | |
| 92 | Y | A | -2.0994 | |
| 93 | E | A | -2.4297 | |
| 94 | R | A | -4.0485 | |
| 95 | E | A | -4.3643 | |
| 96 | D | A | -4.1201 | |
| 97 | Y | A | -2.9902 | |
| 98 | R | A | -3.3507 | |
| 99 | G | A | -2.2853 | |
| 100 | Q | A | -1.1233 | |
| 101 | M | A | -0.5952 | |
| 102 | I | A | -0.9152 | |
| 103 | E | A | -2.5526 | |
| 104 | F | A | 0.0000 | |
| 105 | T | A | -2.5279 | |
| 106 | E | A | -2.9992 | |
| 107 | D | A | -2.2101 | |
| 108 | C | A | 0.0000 | |
| 109 | S | A | -1.5185 | |
| 110 | C | A | -1.5805 | |
| 111 | L | A | 0.0000 | |
| 112 | Q | A | -3.1277 | |
| 113 | D | A | -3.5577 | |
| 114 | R | A | -3.5358 | |
| 115 | F | A | 0.0000 | |
| 116 | R | A | -2.9971 | |
| 117 | F | A | -1.6890 | |
| 118 | N | A | -2.0008 | |
| 119 | E | A | -2.7579 | |
| 120 | I | A | 0.0000 | |
| 122 | S | A | 0.0000 | |
| 123 | L | A | 0.0000 | |
| 124 | N | A | 0.0000 | |
| 125 | V | A | 0.0000 | |
| 126 | L | A | -1.2548 | |
| 127 | E | A | -1.9210 | |
| 128 | G | A | -1.2494 | |
| 129 | S | A | 0.0000 | |
| 130 | W | A | 0.0000 | |
| 131 | V | A | 0.0000 | |
| 132 | L | A | 0.0000 | |
| 133 | Y | A | 0.0000 | |
| 134 | E | A | -1.3096 | |
| 135 | L | A | -0.6387 | |
| 136 | S | A | -1.1129 | |
| 137 | N | A | -1.5420 | |
| 138 | Y | A | -1.2749 | |
| 139 | R | A | -1.8630 | |
| 140 | G | A | -1.0875 | |
| 141 | R | A | -1.3717 | |
| 142 | Q | A | -0.7680 | |
| 143 | Y | A | -0.1060 | |
| 144 | L | A | 0.2609 | |
| 145 | L | A | 0.0000 | |
| 146 | M | A | -0.1993 | |
| 147 | P | A | -0.9776 | |
| 148 | G | A | -1.3279 | |
| 149 | D | A | -2.2945 | |
| 150 | Y | A | -2.4747 | |
| 151 | R | A | -4.0178 | |
| 152 | R | A | -3.3748 | |
| 153 | Y | A | -1.8228 | |
| 154 | Q | A | -1.9985 | |
| 155 | D | A | -2.0223 | |
| 156 | W | A | 0.0000 | |
| 157 | G | A | -1.1317 | |
| 158 | A | A | 0.0000 | |
| 159 | T | A | -0.6276 | |
| 160 | N | A | -1.2247 | |
| 161 | A | A | -1.9365 | |
| 162 | R | A | -1.7495 | |
| 163 | V | A | 0.0000 | |
| 164 | G | A | 0.0000 | |
| 165 | S | A | 0.0000 | |
| 166 | L | A | 0.0000 | |
| 167 | R | A | -1.3322 | |
| 168 | R | A | -1.5765 | |
| 169 | V | A | 0.0000 | |
| 170 | I | A | -0.1746 | |
| 171 | D | A | -0.6869 | |
| 172 | F | A | 0.6504 | |
| 173 | S | A | 0.2811 |