Project name: query_structure

Status: done

Started: 2026-03-17 00:49:07
Settings
Chain sequence(s) A: RGNWGNQIEFVLTSVGYAVGLGNVWRFPYLCYRNGGGAFMFPYFIMLIFCGIPAFFMELSFGQFASQGCLGVWRISPMFKGVGYGMMVVSTYIGIYYNVVICIAFYYFFSSMTHVLPWAYCNNPWNTHDCAGVLDLTHSLQRTSPSEEYWRLYVLKLSDDIGNFGEVRLPLLGCLGVAWLVVFLCLIRGVVYFTATFPYVVLTILFVRGVTLEGAFDGIMYYLTPQWDKILEAKVWGDAASQAFYSLGCAWGGLITMASYNKFHNNCYRDSVIISITNCATSVYAGFVIFSILGFMANHLGVDVSRVADHGPGLAFVAYPEALTLLPISPLWSLLFFFMLILLGLGTQFCLLETLVTAIVDEVGNEWILQKKTYVTLGVAVAGFLLGIPLTSQAGIYWLLLMDNYAASFSLVVISCIMCVAIMYIYGHRNYFQDIQMMLGFPPPLFFQICWRFVSPAIIFFILVFTVIQYQPITYNHYQYPGWAVAIGFLMALSSVLCIPLYAMFRLARTDGDTLLQRLKNATKPSRDWGPALLEHRTG
B: QVQLVESGGGLVQAGGSLRLSCAASGFPVYAYEMYWYRQAPGKEREWVAAISSSGTWAGYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNVKDWGASWAYYDYWGQGTQVTVS
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:05:15)
[INFO]       Main:     Simulation completed successfully.                                          (00:05:21)
Show buried residues

Minimal score value
-3.4882
Maximal score value
3.6399
Average score
-0.0027
Total score value
-1.7946

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
100 R A -1.9166
101 G A -1.2844
102 N A -0.8565
103 W A 0.2330
104 G A -0.5457
105 N A -1.1841
106 Q A -0.6696
107 I A 0.6636
108 E A -0.1471
109 F A 0.5485
110 V A 1.3037
111 L A 1.4459
112 T A 1.1737
113 S A 0.0000
114 V A 1.3192
115 G A 1.0683
116 Y A 1.3102
117 A A 0.0000
118 V A 0.0000
119 G A 0.1597
120 L A 0.0000
121 G A -0.0853
122 N A 0.0000
123 V A 0.0000
124 W A 0.0000
125 R A 0.0000
126 F A 0.0000
127 P A 0.0000
128 Y A 0.0000
129 L A 0.0000
130 C A 0.0000
131 Y A 0.0000
132 R A -0.8420
133 N A 0.0000
134 G A 0.0000
135 G A 0.0000
136 G A 0.0000
137 A A 0.0000
138 F A 0.0000
139 M A 0.8190
140 F A 1.3104
141 P A 0.0000
142 Y A 0.0000
143 F A 1.7116
144 I A 1.6139
145 M A 0.0000
146 L A 0.0000
147 I A 1.9596
148 F A 1.7100
149 C A 0.0000
150 G A 0.0000
151 I A 0.0000
152 P A 0.0000
153 A A 0.0000
154 F A 0.0000
155 F A 0.0000
156 M A 0.0000
157 E A 0.0000
158 L A 0.2092
159 S A 0.0000
160 F A 0.0000
161 G A 0.0000
162 Q A 0.0000
163 F A 0.0000
164 A A 0.0000
165 S A -0.2282
166 Q A -0.6435
167 G A 0.0000
168 C A 0.0000
169 L A 0.0000
170 G A -0.9970
171 V A 0.0000
172 W A 0.0000
173 R A -1.4639
174 I A 0.0000
175 S A 0.0000
176 P A -0.7133
177 M A 0.0000
178 F A 0.2125
179 K A -0.1807
180 G A 0.0000
181 V A 0.0000
182 G A 0.0000
183 Y A 0.6147
184 G A 0.0000
185 M A 0.0000
186 M A 0.5025
187 V A 0.6579
188 V A 0.0000
189 S A 0.0000
190 T A 0.2434
191 Y A 0.4715
192 I A 0.0000
193 G A 0.0000
194 I A 0.0000
195 Y A 0.0000
196 Y A 0.0000
197 N A 0.0000
198 V A 0.0000
199 V A 0.0000
200 I A 0.0000
201 C A 0.0000
202 I A 0.0000
203 A A 0.0000
204 F A 0.0000
205 Y A 0.5243
206 Y A 0.0000
207 F A 1.4933
208 F A 1.6905
209 S A 1.0441
210 S A 0.0000
211 M A 1.3984
212 T A 0.4516
213 H A -0.2024
214 V A 0.7731
215 L A 0.0000
216 P A -0.0064
217 W A 0.0000
218 A A 0.0000
219 Y A -0.4242
220 C A -1.0209
221 N A -1.5752
222 N A -0.9036
223 P A -0.5217
224 W A -0.1526
225 N A -0.6356
226 T A -0.9794
227 H A -1.7727
228 D A -1.7311
229 C A -1.3999
230 A A -1.0900
231 G A 0.0000
232 V A 0.0000
233 L A -0.5009
234 D A -1.7220
238 L A 1.2808
239 T A 0.3692
257 H A -0.9818
258 S A -0.8538
259 L A 0.3097
260 Q A -1.2912
261 R A -1.7084
262 T A -0.9683
263 S A 0.0000
264 P A 0.0000
265 S A 0.0000
266 E A 0.0000
267 E A 0.0000
268 Y A 0.0000
269 W A 0.0000
270 R A -0.0604
271 L A 0.3606
272 Y A 0.4037
273 V A 0.0000
274 L A 0.0000
275 K A -0.9522
276 L A -0.6942
277 S A -1.6638
278 D A -2.2814
279 D A -1.9160
280 I A 0.0000
281 G A -1.2909
282 N A -1.9109
283 F A -0.7588
284 G A -1.5220
285 E A -1.7622
286 V A -0.0467
287 R A 0.1088
288 L A 1.2884
289 P A 0.5377
290 L A 0.0000
291 L A 0.8022
292 G A 0.1601
293 C A 0.0000
294 L A 0.0000
295 G A 0.7310
296 V A 1.2160
297 A A 0.0000
298 W A 0.0000
299 L A 2.4010
300 V A 1.8284
301 V A 0.0000
302 F A 1.8342
303 L A 1.7505
304 C A 1.1615
305 L A 1.0572
306 I A 1.2470
307 R A -0.8103
308 G A -0.5360
315 V A 2.5799
316 V A 1.9645
317 Y A 2.3087
318 F A 2.4427
319 T A 1.5882
320 A A 0.0000
321 T A 1.4044
322 F A 1.4670
323 P A 0.0000
324 Y A 1.3805
325 V A 2.0789
326 V A 0.0000
327 L A 0.0000
328 T A 1.1963
329 I A 1.1401
330 L A 0.0000
331 F A 1.1308
332 V A 0.9675
333 R A 0.4305
334 G A 0.0000
335 V A 0.9941
336 T A 0.0000
337 L A 0.0000
338 E A -0.7002
339 G A -0.4320
340 A A 0.0000
341 F A 1.2490
342 D A -0.9889
343 G A 0.0000
344 I A 1.0627
345 M A 0.8921
346 Y A 0.3328
347 Y A 0.0000
348 L A 1.2306
349 T A 0.5898
350 P A 0.0246
351 Q A -0.5355
352 W A 0.2307
353 D A -1.4898
354 K A -1.0591
355 I A 0.1999
356 L A 0.9057
357 E A -0.4896
358 A A 0.0000
359 K A -0.2662
360 V A 0.0000
361 W A 0.5609
362 G A 0.0000
363 D A 0.0000
364 A A 0.0000
365 A A 0.0000
366 S A 0.0000
367 Q A 0.0000
368 A A 0.0000
369 F A 0.0000
370 Y A 0.0000
371 S A -0.0602
372 L A 0.0000
373 G A -0.0468
374 C A 0.0000
375 A A 0.0000
376 W A 0.0000
377 G A 0.0000
378 G A 0.1194
379 L A 0.3776
380 I A 0.0000
381 T A 0.0000
382 M A 0.6606
383 A A 0.0000
384 S A 0.2216
385 Y A 0.7738
386 N A -0.6929
387 K A -1.9541
388 F A -1.2338
389 H A -1.7731
390 N A -1.5806
391 N A -1.1763
392 C A 0.0000
393 Y A -0.0123
394 R A -0.4656
395 D A 0.1762
396 S A 0.0000
397 V A 1.2684
398 I A 1.4708
399 I A 1.4888
400 S A 0.0000
401 I A 2.3107
402 T A 1.4225
403 N A 0.0000
404 C A 1.0141
405 A A 0.7361
406 T A 0.0000
407 S A 0.0000
408 V A 0.6498
409 Y A 0.7169
410 A A 0.0000
411 G A 0.0000
412 F A 0.8921
413 V A 0.0000
414 I A 0.0000
415 F A 0.0000
416 S A 0.0000
417 I A 0.0000
418 L A 0.0000
419 G A 0.0000
420 F A 0.0000
421 M A 0.0000
422 A A 0.0000
423 N A -1.3856
424 H A 0.0000
425 L A 0.0000
426 G A -0.8653
427 V A -1.0832
428 D A -2.3469
429 V A 0.0000
430 S A -1.5655
431 R A -2.5459
432 V A 0.0000
433 A A 0.0000
434 D A -1.7407
435 H A 0.0000
436 G A 0.0000
437 P A 0.0000
438 G A 0.0000
439 L A 0.0000
440 A A 0.0000
441 F A 0.0000
442 V A 0.0000
443 A A 0.0000
444 Y A 0.0000
445 P A 0.0000
446 E A 0.0000
447 A A 0.0000
448 L A 0.0000
449 T A 0.0000
450 L A 0.1399
451 L A 0.0000
452 P A 0.6106
453 I A 1.3745
454 S A 0.0000
455 P A 0.0000
456 L A 1.2928
457 W A 1.0706
458 S A 0.0000
459 L A 1.5368
460 L A 1.2946
461 F A 0.0000
462 F A 0.0000
463 F A 1.7131
464 M A 0.0000
465 L A 0.0000
466 I A 0.0000
467 L A 0.5791
468 L A 0.0000
469 G A 0.0000
470 L A 0.4330
471 G A 0.1783
472 T A 0.2268
473 Q A 0.0000
474 F A 0.4221
475 C A 0.2638
476 L A 0.0000
477 L A 0.0000
478 E A -0.5444
479 T A 0.0000
480 L A 0.0000
481 V A 0.0000
482 T A -0.5436
483 A A 0.0000
484 I A -0.1656
485 V A -0.8837
486 D A -2.1025
487 E A -1.6872
488 V A -0.7489
489 G A -1.2728
490 N A -2.1168
491 E A -1.9213
492 W A -0.3492
493 I A 0.0000
494 L A -0.3542
495 Q A -1.1989
496 K A -0.7248
497 K A -0.5550
498 T A 0.4836
499 Y A 0.9957
500 V A 0.7097
501 T A 0.0000
502 L A 1.5442
503 G A 0.8813
504 V A 1.1848
505 A A 0.0000
506 V A 2.1831
507 A A 1.7799
508 G A 0.0000
509 F A 2.3657
510 L A 2.9867
511 L A 2.7557
512 G A 0.0000
513 I A 1.7821
514 P A 0.6850
515 L A 0.0000
516 T A 0.0000
517 S A 0.0000
518 Q A -1.3449
519 A A 0.0000
520 G A 0.0000
521 I A 0.0000
522 Y A 0.0000
523 W A 0.1452
524 L A 0.0000
525 L A 0.0000
526 L A 0.0000
527 M A 0.2912
528 D A 0.0000
529 N A 0.0000
530 Y A 0.8231
531 A A 0.0000
532 A A 0.0000
533 S A 0.0000
534 F A 0.4898
535 S A 0.0000
536 L A 0.0000
537 V A 0.0000
538 V A 0.9462
539 I A 0.0000
540 S A 0.0000
541 C A 0.8051
542 I A 0.7536
543 M A 0.0000
544 C A 0.0000
545 V A 1.4687
546 A A 0.0000
547 I A 0.0000
548 M A 0.0000
549 Y A 1.7293
550 I A 1.5638
551 Y A 0.4002
552 G A 0.0697
553 H A -0.9295
554 R A -2.1033
555 N A -1.4860
556 Y A 0.0000
557 F A -1.0909
558 Q A -1.4194
559 D A -1.2524
560 I A 0.0000
561 Q A -0.9131
562 M A -1.0127
563 M A 0.0000
564 L A -0.5575
565 G A -0.5676
566 F A 0.2363
567 P A -0.0521
568 P A 0.0000
569 P A 1.1332
570 L A 2.0430
571 F A 1.9772
572 F A 0.0000
573 Q A 1.2153
574 I A 1.9872
575 C A 0.0000
576 W A 0.0000
577 R A 0.9652
578 F A 2.1379
579 V A 1.7379
580 S A 0.0000
581 P A 1.5827
582 A A 1.8067
583 I A 2.0346
584 I A 0.0000
585 F A 3.3543
586 F A 3.4368
587 I A 0.0000
588 L A 3.2865
589 V A 3.4742
590 F A 3.5944
591 T A 2.6358
592 V A 3.6399
593 I A 3.4768
594 Q A 1.5505
595 Y A 1.4384
596 Q A -0.4420
597 P A -0.8258
598 I A 0.0000
599 T A -1.1860
600 Y A 0.0000
601 N A -1.7984
602 H A -1.6833
603 Y A -1.4687
604 Q A -1.6872
605 Y A 0.0000
606 P A -0.4248
607 G A -0.1463
608 W A 0.7466
609 A A 0.0000
610 V A 0.6888
611 A A 1.1644
612 I A 1.6584
613 G A 0.0000
614 F A 1.9653
615 L A 2.5100
616 M A 0.0000
617 A A 1.5689
618 L A 2.0160
619 S A 1.3058
620 S A 0.0000
621 V A 1.4490
622 L A 1.6667
623 C A 1.2752
624 I A 0.0000
625 P A 1.3555
626 L A 2.3513
627 Y A 1.8012
628 A A 1.4526
629 M A 2.0534
630 F A 1.8739
631 R A 0.1999
632 L A 0.3638
633 A A -0.4891
634 R A -1.7547
635 T A -1.9476
636 D A -3.0189
637 G A -2.3533
638 D A -2.1013
639 T A -0.4761
640 L A 1.2759
641 L A 0.6911
642 Q A -1.5676
643 R A -1.7266
644 L A -0.6732
645 K A -2.1627
646 N A -2.3617
647 A A 0.0000
648 T A -1.3788
649 K A -2.3675
650 P A -1.9936
651 S A -2.0564
652 R A -2.8269
653 D A -2.3472
654 W A -1.3993
655 G A -1.0545
656 P A -0.0296
657 A A 0.6967
658 L A 1.9194
659 L A 1.4616
660 E A -0.4400
661 H A -1.3061
662 R A -2.2685
663 T A -1.4922
664 G A -1.2349
1 Q B -1.4926
2 V B -0.6768
3 Q B -1.1534
4 L B 0.0000
5 V B 0.1505
6 E B 0.0000
7 S B -0.7652
8 G B -1.0416
9 G B -0.7383
10 G B 0.1355
11 L B 1.0476
12 V B 0.0506
13 Q B -1.2339
14 A B -1.4525
15 G B -1.3328
16 G B -0.8794
17 S B -1.0039
18 L B -0.7635
19 R B -1.8053
20 L B 0.0000
21 S B -0.4840
22 C B 0.0000
23 A B -0.4101
24 A B 0.0000
25 S B -0.8081
26 G B -0.9524
27 F B -0.5757
28 P B -0.2568
29 V B 0.0000
30 Y B -0.3640
31 A B 0.0000
32 Y B 0.0000
33 E B -0.2422
34 M B 0.0000
35 Y B 0.3152
36 W B 0.0000
37 Y B 0.0021
38 R B 0.0000
39 Q B -1.9565
40 A B -2.0598
41 P B -1.4483
42 G B -1.9355
43 K B -3.3264
44 E B -3.4882
45 R B -2.5762
46 E B -1.9290
47 W B -0.4389
48 V B 0.0000
49 A B 0.0000
50 A B 0.2774
51 I B 0.0000
52 S B 0.0000
53 S B 0.0000
54 S B -0.2514
55 G B -0.2867
56 T B 0.3364
57 W B 1.0996
58 A B 0.4871
59 G B -0.1455
60 Y B -0.7330
61 A B -1.2779
62 D B -2.3817
63 S B -1.5766
64 V B 0.0000
65 K B -2.5870
66 G B -1.7539
67 R B -1.3816
68 F B 0.0000
69 T B -0.8641
70 I B 0.0000
71 S B -0.5264
72 R B -1.1267
73 D B -1.8329
74 N B -1.5644
75 A B -1.3471
76 K B -2.3696
77 N B -1.7536
78 T B 0.0000
79 V B 0.0000
80 Y B -0.6224
81 L B 0.0000
82 Q B -1.2322
83 M B 0.0000
84 N B -1.3787
85 S B -1.2185
86 L B 0.0000
87 K B -2.2712
88 P B -1.9025
89 E B -2.3006
90 D B 0.0000
91 T B -0.9710
92 A B 0.0000
93 V B -0.6088
94 Y B 0.0000
95 Y B -0.1335
96 C B 0.0000
97 N B 0.0000
98 V B 0.0000
99 K B 0.3312
100 D B 0.3725
101 W B 1.0932
102 G B 0.4777
103 A B 0.0000
104 S B 0.8248
105 W B 1.2759
106 A B 1.2373
107 Y B 1.7667
108 Y B 1.6539
109 D B 0.6772
110 Y B 0.5872
111 W B 0.3794
112 G B -0.3140
113 Q B -1.1284
114 G B -0.6318
115 T B 0.0000
116 Q B -1.1842
117 V B 0.0000
118 T B -0.3622
119 V B 0.0000
120 S B -0.8304
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Laboratory of Theory of Biopolymers 2018