| Chain sequence(s) |
A: WQPPWYCKEPVRIGSCKKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKCLGK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:55)
[INFO] Main: Simulation completed successfully. (00:00:56)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | W | A | -0.5897 | |
| 2 | Q | A | -0.9632 | |
| 3 | P | A | -0.6114 | |
| 4 | P | A | -0.2960 | |
| 5 | W | A | 0.3161 | |
| 6 | Y | A | -0.3584 | |
| 7 | C | A | 0.0000 | |
| 8 | K | A | -1.4747 | |
| 9 | E | A | -1.0951 | |
| 10 | P | A | -0.7718 | |
| 11 | V | A | -0.1153 | |
| 12 | R | A | -0.7100 | |
| 13 | I | A | 0.7263 | |
| 14 | G | A | -0.0759 | |
| 15 | S | A | -0.6275 | |
| 16 | C | A | -1.0172 | |
| 17 | K | A | -2.6070 | |
| 18 | K | A | -2.3443 | |
| 19 | Q | A | -0.7460 | |
| 20 | F | A | 1.2320 | |
| 21 | S | A | 0.6668 | |
| 22 | S | A | 0.0000 | |
| 23 | F | A | 0.5281 | |
| 24 | Y | A | 0.0524 | |
| 25 | F | A | 0.0000 | |
| 26 | K | A | -1.2358 | |
| 27 | W | A | -0.7851 | |
| 28 | T | A | -0.5981 | |
| 29 | A | A | -0.8596 | |
| 30 | K | A | -1.7195 | |
| 31 | K | A | -1.9846 | |
| 32 | C | A | 0.0000 | |
| 33 | L | A | 0.2004 | |
| 34 | P | A | 0.6587 | |
| 35 | F | A | 1.0546 | |
| 36 | L | A | 1.2162 | |
| 37 | F | A | 0.9093 | |
| 38 | S | A | 0.0000 | |
| 39 | G | A | -0.1136 | |
| 40 | C | A | 0.0577 | |
| 41 | G | A | -0.1800 | |
| 42 | G | A | -0.5714 | |
| 43 | N | A | -0.8561 | |
| 44 | A | A | -0.3826 | |
| 45 | N | A | 0.0000 | |
| 46 | R | A | -0.4508 | |
| 47 | F | A | 0.0000 | |
| 48 | Q | A | -0.8482 | |
| 49 | T | A | -0.0091 | |
| 50 | I | A | 0.8724 | |
| 51 | G | A | -0.5897 | |
| 52 | E | A | -1.9453 | |
| 53 | C | A | 0.0000 | |
| 54 | R | A | -3.2996 | |
| 55 | K | A | -3.5103 | |
| 56 | K | A | -2.4430 | |
| 57 | C | A | 0.0000 | |
| 58 | L | A | -2.0386 | |
| 59 | G | A | -2.1532 | |
| 60 | K | A | -3.0312 |