| Chain sequence(s) |
A: MGVSDVPRDLEVVTATPTSLLISWDGPKYYVKYYRITYGETGGNSPVQEFTVPRTDHTATISGLKPGVDYTITVYAVKGQYGPYYGSRPISINYRTEIDKPS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:17)
[INFO] Main: Simulation completed successfully. (00:01:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.2914 | |
| 2 | G | A | 0.6580 | |
| 3 | V | A | 1.3135 | |
| 4 | S | A | -0.3973 | |
| 5 | D | A | -1.3431 | |
| 6 | V | A | -1.7752 | |
| 7 | P | A | 0.0000 | |
| 8 | R | A | -3.5134 | |
| 9 | D | A | -3.5041 | |
| 10 | L | A | 0.0000 | |
| 11 | E | A | -2.1474 | |
| 12 | V | A | 0.0659 | |
| 13 | V | A | 1.4933 | |
| 14 | T | A | 0.8025 | |
| 15 | A | A | 0.0571 | |
| 16 | T | A | -0.7337 | |
| 17 | P | A | -1.6652 | |
| 18 | T | A | -1.1576 | |
| 19 | S | A | -0.6962 | |
| 20 | L | A | 0.0000 | |
| 21 | L | A | 0.7142 | |
| 22 | I | A | 0.0000 | |
| 23 | S | A | -1.1716 | |
| 24 | W | A | 0.0000 | |
| 25 | D | A | -3.5287 | |
| 26 | G | A | -2.3099 | |
| 27 | P | A | -1.1796 | |
| 28 | K | A | -1.1450 | |
| 29 | Y | A | 0.7523 | |
| 30 | Y | A | 0.5248 | |
| 31 | V | A | -0.9059 | |
| 32 | K | A | -1.7827 | |
| 33 | Y | A | -1.3423 | |
| 34 | Y | A | 0.0000 | |
| 35 | R | A | -0.6757 | |
| 36 | I | A | 0.0000 | |
| 37 | T | A | -0.4428 | |
| 38 | Y | A | -0.2981 | |
| 39 | G | A | 0.0000 | |
| 40 | E | A | -1.7409 | |
| 41 | T | A | -1.4453 | |
| 42 | G | A | -1.3718 | |
| 43 | G | A | -1.5549 | |
| 44 | N | A | -1.5626 | |
| 45 | S | A | -0.8565 | |
| 46 | P | A | -0.3120 | |
| 47 | V | A | 0.4551 | |
| 48 | Q | A | -0.8165 | |
| 49 | E | A | -1.5695 | |
| 50 | F | A | -0.5348 | |
| 51 | T | A | -0.4140 | |
| 52 | V | A | -0.6601 | |
| 53 | P | A | -1.5212 | |
| 54 | R | A | -2.4122 | |
| 55 | T | A | -1.4874 | |
| 56 | D | A | -1.5802 | |
| 57 | H | A | -1.5192 | |
| 58 | T | A | -0.5422 | |
| 59 | A | A | 0.0000 | |
| 60 | T | A | 0.2246 | |
| 61 | I | A | 0.0000 | |
| 62 | S | A | -0.6390 | |
| 63 | G | A | -0.9892 | |
| 64 | L | A | 0.0000 | |
| 65 | K | A | -2.4004 | |
| 66 | P | A | -1.8396 | |
| 67 | G | A | -1.2743 | |
| 68 | V | A | -1.3082 | |
| 69 | D | A | -2.6384 | |
| 70 | Y | A | 0.0000 | |
| 71 | T | A | -0.8468 | |
| 72 | I | A | 0.0000 | |
| 73 | T | A | 0.0000 | |
| 74 | V | A | 0.0000 | |
| 75 | Y | A | -0.2114 | |
| 76 | A | A | 0.0000 | |
| 77 | V | A | 0.0000 | |
| 78 | K | A | -0.5663 | |
| 79 | G | A | -0.9491 | |
| 80 | Q | A | -0.7832 | |
| 81 | Y | A | 1.0825 | |
| 82 | G | A | 0.6594 | |
| 83 | P | A | 0.8179 | |
| 84 | Y | A | 1.8574 | |
| 85 | Y | A | 1.6941 | |
| 86 | G | A | 0.2334 | |
| 87 | S | A | -0.8289 | |
| 88 | R | A | -1.7151 | |
| 89 | P | A | -1.1609 | |
| 90 | I | A | -0.7418 | |
| 91 | S | A | -0.8942 | |
| 92 | I | A | -0.8376 | |
| 93 | N | A | -1.7233 | |
| 94 | Y | A | -1.4577 | |
| 95 | R | A | -1.9889 | |
| 96 | T | A | 0.0000 | |
| 97 | E | A | -2.1281 | |
| 98 | I | A | -0.7020 | |
| 99 | D | A | -2.5245 | |
| 100 | K | A | -2.4725 | |
| 101 | P | A | -1.3980 | |
| 102 | S | A | -1.0215 |