| Chain sequence(s) |
A: VFSKLAYILYGSGGSGKQSSRVPLY
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:16)
[INFO] Main: Simulation completed successfully. (00:00:16)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 2.1137 | |
| 2 | F | A | 2.2146 | |
| 3 | S | A | -0.1714 | |
| 4 | K | A | -1.4584 | |
| 5 | L | A | 1.2425 | |
| 6 | A | A | 0.5267 | |
| 7 | Y | A | 1.5083 | |
| 8 | I | A | 1.9708 | |
| 9 | L | A | 2.0446 | |
| 10 | Y | A | 1.5102 | |
| 11 | G | A | -0.0717 | |
| 12 | S | A | -0.3787 | |
| 13 | G | A | -0.5876 | |
| 14 | G | A | -0.5882 | |
| 15 | S | A | -0.3824 | |
| 16 | G | A | -0.8133 | |
| 17 | K | A | -2.0388 | |
| 18 | Q | A | -1.5676 | |
| 19 | S | A | -0.6448 | |
| 20 | S | A | -0.5959 | |
| 21 | R | A | -1.5622 | |
| 22 | V | A | 1.3924 | |
| 23 | P | A | 0.3494 | |
| 24 | L | A | 1.7476 | |
| 25 | Y | A | 1.6055 |