| Chain sequence(s) |
A: EVQLQASGGGLVQGGDSLRLSCAASWFRQAPGKEREFVSRFTISRDNAKNAVYLQMNSLKPEDTAVYYCAVGQGTQVTVSSGRTLGDYGVAVISRSTIITDYANSVKGIANPVYATSRNSDDYGHW
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:04)
[INFO] Main: Simulation completed successfully. (00:01:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.2813 | |
| 2 | V | A | 0.1539 | |
| 3 | Q | A | -1.1749 | |
| 4 | L | A | -0.5847 | |
| 5 | Q | A | -1.3765 | |
| 6 | A | A | 0.0000 | |
| 7 | S | A | -1.1338 | |
| 8 | G | A | -1.0233 | |
| 9 | G | A | -0.5939 | |
| 10 | G | A | 0.3096 | |
| 11 | L | A | 1.2104 | |
| 12 | V | A | -0.0546 | |
| 13 | Q | A | -1.7481 | |
| 14 | G | A | -1.8137 | |
| 15 | G | A | -1.7705 | |
| 16 | D | A | -2.0786 | |
| 17 | S | A | -1.9631 | |
| 18 | L | A | 0.0000 | |
| 19 | R | A | -2.3022 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -1.0207 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.9017 | |
| 24 | A | A | -0.2943 | |
| 25 | S | A | 0.5498 | |
| 26 | W | A | 0.0000 | |
| 27 | F | A | -0.2836 | |
| 28 | R | A | -1.5554 | |
| 29 | Q | A | -2.5288 | |
| 30 | A | A | -2.3547 | |
| 31 | P | A | -1.4666 | |
| 32 | G | A | -1.9258 | |
| 33 | K | A | -3.7727 | |
| 34 | E | A | -4.1396 | |
| 35 | R | A | -3.8594 | |
| 36 | E | A | -2.6701 | |
| 37 | F | A | 0.0667 | |
| 38 | V | A | 0.0000 | |
| 39 | S | A | -0.6347 | |
| 40 | R | A | -1.4695 | |
| 41 | F | A | -0.8059 | |
| 42 | T | A | -0.8051 | |
| 43 | I | A | -0.5696 | |
| 44 | S | A | -1.1154 | |
| 45 | R | A | -2.8948 | |
| 46 | D | A | -2.9588 | |
| 47 | N | A | -3.0860 | |
| 48 | A | A | -2.2040 | |
| 49 | K | A | -3.1441 | |
| 50 | N | A | -3.0686 | |
| 51 | A | A | -2.1952 | |
| 52 | V | A | 0.0000 | |
| 53 | Y | A | 0.0000 | |
| 54 | L | A | 0.0000 | |
| 55 | Q | A | -1.2379 | |
| 56 | M | A | 0.0000 | |
| 57 | N | A | -2.2642 | |
| 58 | S | A | -1.9616 | |
| 59 | L | A | 0.0000 | |
| 60 | K | A | -2.5552 | |
| 61 | P | A | -1.6661 | |
| 62 | E | A | -2.4661 | |
| 63 | D | A | -1.7350 | |
| 64 | T | A | -1.1628 | |
| 65 | A | A | 0.0000 | |
| 66 | V | A | -0.1913 | |
| 67 | Y | A | 0.0000 | |
| 68 | Y | A | 0.0302 | |
| 69 | C | A | 0.0000 | |
| 70 | A | A | 0.0337 | |
| 71 | V | A | 0.4158 | |
| 72 | G | A | -0.3837 | |
| 73 | Q | A | -0.5122 | |
| 74 | G | A | 0.0207 | |
| 75 | T | A | 0.0000 | |
| 76 | Q | A | 0.0000 | |
| 77 | V | A | 0.0000 | |
| 78 | T | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | S | A | 0.2302 | |
| 81 | S | A | -0.7119 | |
| 82 | G | A | -0.7400 | |
| 83 | R | A | -2.0393 | |
| 84 | T | A | -0.8434 | |
| 85 | L | A | 0.3328 | |
| 86 | G | A | -0.6679 | |
| 87 | D | A | -1.7752 | |
| 88 | Y | A | -0.6568 | |
| 89 | G | A | 0.0000 | |
| 90 | V | A | 0.0000 | |
| 91 | A | A | 0.4907 | |
| 92 | V | A | 0.0000 | |
| 93 | I | A | 0.8200 | |
| 94 | S | A | -0.4428 | |
| 95 | R | A | -0.5593 | |
| 96 | S | A | -0.2794 | |
| 97 | T | A | 0.8251 | |
| 98 | I | A | 1.6499 | |
| 99 | I | A | 0.9733 | |
| 100 | T | A | -0.2279 | |
| 101 | D | A | -0.8601 | |
| 102 | Y | A | 0.2434 | |
| 103 | A | A | -0.1280 | |
| 104 | N | A | -1.1022 | |
| 105 | S | A | -0.5866 | |
| 106 | V | A | 0.7476 | |
| 107 | K | A | -0.9214 | |
| 108 | G | A | 0.0148 | |
| 109 | I | A | 1.4094 | |
| 110 | A | A | 0.2998 | |
| 111 | N | A | 0.0154 | |
| 112 | P | A | 0.9723 | |
| 113 | V | A | 2.0577 | |
| 114 | Y | A | 1.9494 | |
| 115 | A | A | 0.8695 | |
| 116 | T | A | -0.4790 | |
| 117 | S | A | -1.5098 | |
| 118 | R | A | -2.8890 | |
| 119 | N | A | -3.0652 | |
| 120 | S | A | -2.6353 | |
| 121 | D | A | -3.1198 | |
| 122 | D | A | -2.3648 | |
| 123 | Y | A | -0.3891 | |
| 124 | G | A | -0.4086 | |
| 125 | H | A | -0.3802 | |
| 126 | W | A | 0.5392 |