| Chain sequence(s) |
A: GYFCESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKILRGLCKKIMRSFLRRISWDILTGKKPQAICVDIKICKE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:11)
[INFO] Main: Simulation completed successfully. (00:01:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.1514 | |
| 2 | Y | A | 1.2896 | |
| 3 | F | A | 0.8577 | |
| 4 | C | A | -0.7206 | |
| 5 | E | A | -0.7787 | |
| 6 | S | A | 0.0000 | |
| 7 | C | A | 0.0000 | |
| 8 | R | A | -2.3408 | |
| 9 | K | A | -2.0168 | |
| 10 | I | A | 0.0000 | |
| 11 | I | A | 0.0000 | |
| 12 | Q | A | -2.2844 | |
| 13 | K | A | -2.3421 | |
| 14 | L | A | 0.0000 | |
| 15 | E | A | -1.9822 | |
| 16 | D | A | -2.2432 | |
| 17 | M | A | -0.8920 | |
| 18 | V | A | -0.9813 | |
| 19 | G | A | -1.1466 | |
| 20 | P | A | -1.2385 | |
| 21 | Q | A | -1.5229 | |
| 22 | P | A | -1.7832 | |
| 23 | N | A | -2.7192 | |
| 24 | E | A | -3.5034 | |
| 25 | D | A | -3.5095 | |
| 26 | T | A | -2.0976 | |
| 27 | V | A | 0.0000 | |
| 28 | T | A | -2.2430 | |
| 29 | Q | A | -1.9592 | |
| 30 | A | A | -1.5237 | |
| 31 | A | A | 0.0000 | |
| 32 | S | A | -1.8492 | |
| 33 | Q | A | -2.0658 | |
| 34 | V | A | 0.0000 | |
| 35 | C | A | 0.0000 | |
| 36 | D | A | -2.2192 | |
| 37 | K | A | -2.6493 | |
| 38 | L | A | -1.8455 | |
| 39 | K | A | -1.5596 | |
| 40 | I | A | 0.7687 | |
| 41 | L | A | -0.2466 | |
| 42 | R | A | -1.8589 | |
| 43 | G | A | -1.0648 | |
| 44 | L | A | -0.2827 | |
| 45 | C | A | 0.0000 | |
| 46 | K | A | -2.2820 | |
| 47 | K | A | -2.6665 | |
| 48 | I | A | 0.0000 | |
| 49 | M | A | 0.0000 | |
| 50 | R | A | -2.6845 | |
| 51 | S | A | -1.7156 | |
| 52 | F | A | -1.2062 | |
| 53 | L | A | -1.7157 | |
| 54 | R | A | -2.9338 | |
| 55 | R | A | -1.8809 | |
| 56 | I | A | 0.0000 | |
| 57 | S | A | 0.0000 | |
| 58 | W | A | -0.9168 | |
| 59 | D | A | 0.0000 | |
| 60 | I | A | 0.0000 | |
| 61 | L | A | -0.3883 | |
| 62 | T | A | -0.2259 | |
| 63 | G | A | -0.9456 | |
| 64 | K | A | -1.3007 | |
| 65 | K | A | -2.4332 | |
| 66 | P | A | 0.0000 | |
| 67 | Q | A | -2.5054 | |
| 68 | A | A | -1.9488 | |
| 69 | I | A | 0.0000 | |
| 70 | C | A | 0.0000 | |
| 71 | V | A | -2.1482 | |
| 72 | D | A | -2.4407 | |
| 73 | I | A | -1.6404 | |
| 74 | K | A | -2.5547 | |
| 75 | I | A | 0.0000 | |
| 76 | C | A | 0.0000 | |
| 77 | K | A | -2.6521 | |
| 78 | E | A | -3.2583 |