| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLVSWDAPAVTVVFYDITYGETGGNSPVQEFTVSGSKSTATISGLKPGVDYTITVYAKYLFWKGYSSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:28)
[INFO] Main: Simulation completed successfully. (00:01:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.7703 | |
| 2 | S | A | 0.7445 | |
| 3 | S | A | 0.6402 | |
| 4 | V | A | 0.4675 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.5536 | |
| 7 | K | A | -2.5945 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.8879 | |
| 10 | V | A | 0.1033 | |
| 11 | V | A | 1.5327 | |
| 12 | A | A | 0.8892 | |
| 13 | A | A | 0.2909 | |
| 14 | T | A | -0.3463 | |
| 15 | P | A | -1.1084 | |
| 16 | T | A | -0.9906 | |
| 17 | S | A | -0.5316 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7278 | |
| 20 | V | A | 0.0000 | |
| 21 | S | A | -0.8840 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.3881 | |
| 24 | A | A | -1.0956 | |
| 25 | P | A | 0.0638 | |
| 26 | A | A | 0.4829 | |
| 27 | V | A | 0.9967 | |
| 28 | T | A | 1.0242 | |
| 29 | V | A | 1.3293 | |
| 30 | V | A | 1.8551 | |
| 31 | F | A | 1.5688 | |
| 32 | Y | A | 0.0000 | |
| 33 | D | A | -0.0164 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.4604 | |
| 36 | Y | A | -0.2851 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.5498 | |
| 39 | T | A | -1.2507 | |
| 40 | G | A | -1.2460 | |
| 41 | G | A | -1.4339 | |
| 42 | N | A | -1.5615 | |
| 43 | S | A | -0.8857 | |
| 44 | P | A | -0.3280 | |
| 45 | V | A | 0.4409 | |
| 46 | Q | A | -0.8202 | |
| 47 | E | A | -1.5785 | |
| 48 | F | A | -0.5390 | |
| 49 | T | A | 0.0872 | |
| 50 | V | A | 0.3181 | |
| 51 | S | A | 0.0734 | |
| 52 | G | A | 0.2315 | |
| 53 | S | A | -0.5245 | |
| 54 | K | A | -1.3749 | |
| 55 | S | A | -1.0323 | |
| 56 | T | A | -0.5941 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2586 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6595 | |
| 61 | G | A | -1.0262 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.3525 | |
| 64 | P | A | -1.6362 | |
| 65 | G | A | -1.4298 | |
| 66 | V | A | -1.3798 | |
| 67 | D | A | -2.0840 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.7713 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.0928 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.6296 | |
| 74 | A | A | 0.0000 | |
| 75 | K | A | 1.1130 | |
| 76 | Y | A | 2.2819 | |
| 77 | L | A | 2.9929 | |
| 78 | F | A | 2.9750 | |
| 79 | W | A | 1.8017 | |
| 80 | K | A | -0.3813 | |
| 81 | G | A | 0.2855 | |
| 82 | Y | A | 0.9946 | |
| 83 | S | A | 0.6248 | |
| 84 | S | A | 0.1131 | |
| 85 | P | A | 0.2797 | |
| 86 | I | A | 0.1262 | |
| 87 | S | A | -0.4965 | |
| 88 | I | A | -0.7109 | |
| 89 | N | A | -1.7244 | |
| 90 | Y | A | -1.4638 | |
| 91 | R | A | -2.5104 | |
| 92 | T | A | -1.4921 |