| Chain sequence(s) |
A: SAVKALFDYKAQREDELTFTKSAIIQNVEKQDGGWWRGDYGGKKQLWFPSNYVEE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 5 | S | A | -1.7228 | |
| 6 | A | A | -1.4175 | |
| 7 | V | A | 0.0000 | |
| 8 | K | A | -1.1661 | |
| 9 | A | A | 0.0000 | |
| 10 | L | A | 0.0027 | |
| 11 | F | A | 0.2858 | |
| 12 | D | A | -1.7796 | |
| 13 | Y | A | 0.0000 | |
| 14 | K | A | -2.4765 | |
| 15 | A | A | -2.4724 | |
| 16 | Q | A | -3.0826 | |
| 17 | R | A | -3.8056 | |
| 18 | E | A | -3.3816 | |
| 19 | D | A | -2.8140 | |
| 20 | E | A | 0.0000 | |
| 21 | L | A | 0.0000 | |
| 22 | T | A | -1.2283 | |
| 23 | F | A | 0.0000 | |
| 24 | T | A | -1.3455 | |
| 25 | K | A | -1.3595 | |
| 26 | S | A | -0.7248 | |
| 27 | A | A | 0.0000 | |
| 28 | I | A | 0.5786 | |
| 29 | I | A | 0.0000 | |
| 30 | Q | A | -2.0209 | |
| 31 | N | A | -2.8368 | |
| 32 | V | A | -2.5388 | |
| 33 | E | A | -3.2016 | |
| 34 | K | A | -3.1943 | |
| 35 | Q | A | -2.7586 | |
| 36 | D | A | -2.6171 | |
| 37 | G | A | -1.6933 | |
| 38 | G | A | -1.3266 | |
| 39 | W | A | -1.0028 | |
| 40 | W | A | -1.6255 | |
| 41 | R | A | -2.0545 | |
| 42 | G | A | 0.0000 | |
| 43 | D | A | -1.9401 | |
| 44 | Y | A | -0.8176 | |
| 45 | G | A | -0.8050 | |
| 46 | G | A | -1.3180 | |
| 47 | K | A | -1.8605 | |
| 48 | K | A | -2.7527 | |
| 49 | Q | A | -2.1768 | |
| 50 | L | A | -1.3056 | |
| 51 | W | A | -0.9866 | |
| 52 | F | A | 0.0000 | |
| 53 | P | A | 0.0000 | |
| 54 | S | A | -1.1352 | |
| 55 | N | A | -0.9270 | |
| 56 | Y | A | -0.3233 | |
| 57 | V | A | -1.0092 | |
| 58 | E | A | -2.1951 | |
| 59 | E | A | -2.4677 |