| Chain sequence(s) |
B: CGSGSNAEIRARANALIATEASPAFKAAYAAASKVVAAVMAKKGKATEEDIRTLGLEAGFSEEEVEAAVETFRLAVVVTDYVKKELAGTATEEERAAAEAALAA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:48)
[INFO] Main: Simulation completed successfully. (00:01:49)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | B | 0.4728 | |
| 2 | G | B | -0.1649 | |
| 3 | S | B | -0.8388 | |
| 4 | G | B | -1.5934 | |
| 5 | S | B | -1.9120 | |
| 6 | N | B | -2.7468 | |
| 7 | A | B | -2.3539 | |
| 8 | E | B | -3.3956 | |
| 9 | I | B | 0.0000 | |
| 10 | R | B | -3.6394 | |
| 11 | A | B | -2.6425 | |
| 12 | R | B | -2.7202 | |
| 13 | A | B | 0.0000 | |
| 14 | N | B | -2.3961 | |
| 15 | A | B | -1.4246 | |
| 16 | L | B | -1.3994 | |
| 17 | I | B | 0.0000 | |
| 18 | A | B | -1.0301 | |
| 19 | T | B | -1.1370 | |
| 20 | E | B | -2.2772 | |
| 21 | A | B | 0.0000 | |
| 22 | S | B | -0.7218 | |
| 23 | P | B | -0.6536 | |
| 24 | A | B | -0.2115 | |
| 25 | F | B | 0.0000 | |
| 26 | K | B | -0.8074 | |
| 27 | A | B | -0.2099 | |
| 28 | A | B | -0.5382 | |
| 29 | Y | B | -0.2083 | |
| 30 | A | B | -0.3200 | |
| 31 | A | B | -0.7104 | |
| 32 | A | B | 0.0000 | |
| 33 | S | B | -0.7141 | |
| 34 | K | B | -1.6713 | |
| 35 | V | B | 0.0000 | |
| 36 | V | B | -0.7305 | |
| 37 | A | B | -0.8508 | |
| 38 | A | B | -0.9598 | |
| 39 | V | B | 0.0000 | |
| 40 | M | B | -1.2259 | |
| 41 | A | B | -1.2078 | |
| 42 | K | B | -2.4544 | |
| 43 | K | B | -2.7192 | |
| 44 | G | B | -2.1105 | |
| 45 | K | B | -2.3904 | |
| 46 | A | B | -1.7184 | |
| 47 | T | B | -1.7961 | |
| 48 | E | B | -2.7195 | |
| 49 | E | B | -2.6411 | |
| 50 | D | B | 0.0000 | |
| 51 | I | B | 0.0000 | |
| 52 | R | B | -2.9065 | |
| 53 | T | B | -1.5789 | |
| 54 | L | B | -1.4001 | |
| 55 | G | B | 0.0000 | |
| 56 | L | B | -1.5069 | |
| 57 | E | B | -1.6470 | |
| 58 | A | B | -1.0702 | |
| 59 | G | B | -1.0590 | |
| 60 | F | B | -1.7776 | |
| 61 | S | B | -2.5410 | |
| 62 | E | B | -3.7991 | |
| 63 | E | B | -3.9987 | |
| 64 | E | B | -3.9917 | |
| 65 | V | B | 0.0000 | |
| 66 | E | B | -4.1118 | |
| 67 | A | B | -3.0074 | |
| 68 | A | B | 0.0000 | |
| 69 | V | B | 0.0000 | |
| 70 | E | B | -2.8825 | |
| 71 | T | B | 0.0000 | |
| 72 | F | B | -1.0753 | |
| 73 | R | B | -1.8941 | |
| 74 | L | B | -0.7215 | |
| 75 | A | B | 0.0000 | |
| 76 | V | B | 0.0748 | |
| 77 | V | B | -0.2499 | |
| 78 | V | B | 0.0000 | |
| 79 | T | B | -1.3544 | |
| 80 | D | B | -1.4470 | |
| 81 | Y | B | 0.0000 | |
| 82 | V | B | 0.0000 | |
| 83 | K | B | -2.6771 | |
| 84 | K | B | -1.9184 | |
| 85 | E | B | -1.5546 | |
| 86 | L | B | -0.8888 | |
| 87 | A | B | -0.6003 | |
| 88 | G | B | -0.7334 | |
| 89 | T | B | -0.9287 | |
| 90 | A | B | -1.9888 | |
| 91 | T | B | -2.3824 | |
| 92 | E | B | -3.4800 | |
| 93 | E | B | -3.6533 | |
| 94 | E | B | -3.1628 | |
| 95 | R | B | -3.7595 | |
| 96 | A | B | -2.6630 | |
| 97 | A | B | -1.8005 | |
| 98 | A | B | 0.0000 | |
| 99 | E | B | -2.5706 | |
| 100 | A | B | -0.9600 | |
| 101 | A | B | 0.0000 | |
| 102 | L | B | 0.0000 | |
| 103 | A | B | -0.7792 | |
| 104 | A | B | -0.2227 |