Project name: P1B9

Status: done

Started: 2026-06-05 03:04:57
Settings
Chain sequence(s) H: QVQLQQSGAELLKPGASVKVSCKASGYTFTNYWMHWVKQRPGRGLEWIGRIDPDNGDSRYNEKFKTKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARRAYYSKDALDYWGQGTSVTVSS
L: DIVLTQSPASLAVSLGQRATISCRASESVDNYGISFMHWYQQKPGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVETDDVATYYCQQSNKDPLTFGAGTKLELK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:38)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:39)
Show buried residues

Minimal score value
-3.4944
Maximal score value
1.4416
Average score
-0.7509
Total score value
-173.4594

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.4586
2 V H -0.8168
3 Q H -1.5890
4 L H 0.0000
5 Q H -2.0703
6 Q H 0.0000
7 S H -0.9765
8 G H -0.7116
9 A H -0.0053
11 E H -0.0115
12 L H 0.9517
13 L H -0.2484
14 K H -1.7487
15 P H -1.4341
16 G H -1.1442
17 A H -0.9288
18 S H -0.9609
19 V H 0.0000
20 K H -1.1981
21 V H 0.0000
22 S H -0.6509
23 C H 0.0000
24 K H -1.5961
25 A H 0.0000
26 S H -1.0985
27 G H -0.9458
28 Y H -0.4870
29 T H -0.4670
30 F H 0.0000
35 T H -1.5284
36 N H -1.0336
37 Y H -0.0987
38 W H -0.2555
39 M H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 K H 0.0000
44 Q H -1.0878
45 R H -1.6338
46 P H -1.2119
47 G H -1.6418
48 R H -2.4876
49 G H -1.4557
50 L H 0.0000
51 E H -1.4655
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 R H -0.7652
56 I H 0.0000
57 D H -1.5659
58 P H 0.0000
59 D H -2.9620
62 N H -2.4030
63 G H -1.7259
64 D H -1.6839
65 S H -1.1475
66 R H -1.9686
67 Y H -1.9333
68 N H -2.6412
69 E H -3.4944
70 K H -3.2100
71 F H 0.0000
72 K H -3.0651
74 T H -1.6561
75 K H -1.4550
76 A H 0.0000
77 T H -0.6793
78 L H 0.0000
79 T H -0.2889
80 V H -0.6465
81 D H -1.1736
82 K H -1.8492
83 P H -0.9375
84 S H -0.8410
85 S H -0.9512
86 T H 0.0000
87 A H 0.0000
88 Y H -0.1708
89 M H 0.0000
90 Q H -0.9813
91 L H 0.0000
92 S H -0.7712
93 S H -0.8416
94 L H 0.0000
95 T H -1.3090
96 S H -1.4549
97 E H -2.0127
98 D H 0.0000
99 S H -0.6487
100 A H 0.0000
101 V H -0.0030
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 R H 0.1985
108 A H 0.0000
109 Y H 1.2563
110 Y H 1.4416
111 S H 0.4771
112 K H 0.0229
113 D H 0.1910
114 A H 0.0000
115 L H 0.0000
116 D H -0.2685
117 Y H 0.0937
118 W H -0.5704
119 G H 0.0000
120 Q H -1.8374
121 G H -1.0226
122 T H 0.0000
123 S H -0.1516
124 V H 0.0000
125 T H -0.1006
126 V H 0.0000
127 S H -0.5541
128 S H -0.7113
1 D L -2.1175
2 I L 0.0000
3 V L 0.6044
4 L L 0.0000
5 T L -0.4822
6 Q L -0.5327
7 S L -0.5717
8 P L -0.4667
9 A L -0.5264
10 S L -1.1127
11 L L -0.8503
12 A L -1.0733
13 V L 0.0000
14 S L -1.5236
15 L L -0.9054
16 G L -1.5815
17 Q L -2.6578
18 R L -2.8964
19 A L 0.0000
20 T L -0.6268
21 I L 0.0000
22 S L -0.8808
23 C L 0.0000
24 R L -2.6350
25 A L 0.0000
26 S L -1.5457
27 E L -2.8636
28 S L -2.4880
29 V L 0.0000
30 D L -1.4614
31 N L -0.7473
34 Y L 0.8526
35 G L -0.1023
36 I L 0.0286
37 S L -0.7328
38 F L -0.5717
39 M L 0.0000
40 H L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.9014
44 Q L -1.2327
45 K L -1.5202
46 P L -1.0434
47 G L -1.3884
48 Q L -2.0890
49 P L -1.3538
50 P L 0.0000
51 K L -1.3941
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L -0.5224
56 R L -0.6792
57 A L 0.0000
65 S L -0.8764
66 N L -1.2199
67 L L -0.2973
68 E L -0.5870
69 S L -0.5010
70 G L -0.4824
71 I L -0.2676
72 P L -0.1973
74 A L -0.2185
75 R L -0.8302
76 F L 0.0000
77 S L -0.5214
78 G L -0.5739
79 S L -0.8887
80 G L -1.4762
83 S L -1.7650
84 R L -2.9916
85 T L -2.6618
86 D L -2.6347
87 F L 0.0000
88 T L -0.7835
89 L L 0.0000
90 T L -0.7841
91 I L 0.0000
92 N L -2.0978
93 P L -1.8984
94 V L 0.0000
95 E L -1.8333
96 T L -1.4571
97 D L -1.9164
98 D L 0.0000
99 V L -0.9712
100 A L 0.0000
101 T L 0.0000
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 S L 0.0000
108 N L -1.5703
109 K L -2.7839
114 D L -2.3307
115 P L -2.1885
116 L L 0.0000
117 T L -0.4276
118 F L 0.2205
119 G L 0.0000
120 A L -0.4562
121 G L -0.8314
122 T L 0.0000
123 K L -2.0968
124 L L 0.0000
125 E L -2.2001
126 L L -1.3141
127 K L -1.8854
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Laboratory of Theory of Biopolymers 2018