Chain sequence(s) |
A: MARESEFRLTKAQREEVSKLSRSVKAKTTRLLKNYGQDFTAYISPKSPDDFKSLNEFNAFKKRAENFTDRSNRDFQFVQNQYGVVISKSELDEILRDTKKAQETAEKILDKFNDVEVISGGKSTGFTVGENKELLAKPDKGFGRIEDFDFESVRTQEGLDRFAARAKNRSKEAYYEESLRRLQDNFIRSVEGTFNSDADDVVEKLRNLPADDFYELFSIYDEISFENFDSENALGMASESILERVRMYVNAYFDGKSDMSLKGF
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | YA42A |
Energy difference between WT (input) and mutated protein (by FoldX) | 1.35437 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:03:12) [INFO] FoldX: Starting FoldX energy minimalization (00:03:25) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:14) [INFO] Main: Simulation completed successfully. (00:06:16) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | M | A | 0.3565 | |
2 | A | A | -0.8356 | |
3 | R | A | -2.7637 | |
4 | E | A | -3.0971 | |
5 | S | A | -2.6448 | |
6 | E | A | -3.2462 | |
7 | F | A | -2.1083 | |
8 | R | A | -3.0757 | |
9 | L | A | 0.0000 | |
10 | T | A | -1.8058 | |
11 | K | A | -2.7440 | |
12 | A | A | -1.8965 | |
13 | Q | A | -2.2631 | |
14 | R | A | -3.1060 | |
15 | E | A | -3.4383 | |
16 | E | A | -3.0957 | |
17 | V | A | 0.0000 | |
18 | S | A | -2.6324 | |
19 | K | A | -3.2437 | |
20 | L | A | 0.0000 | |
21 | S | A | 0.0000 | |
22 | R | A | -3.2828 | |
23 | S | A | -2.3207 | |
24 | V | A | 0.0000 | |
25 | K | A | -2.8260 | |
26 | A | A | -1.9362 | |
27 | K | A | -1.6674 | |
28 | T | A | 0.0000 | |
29 | T | A | -2.1228 | |
30 | R | A | -3.0089 | |
31 | L | A | 0.0000 | |
32 | L | A | -1.7813 | |
33 | K | A | -2.7223 | |
34 | N | A | -1.8623 | |
35 | Y | A | -1.1704 | |
36 | G | A | -1.5055 | |
37 | Q | A | -1.5208 | |
38 | D | A | -2.0634 | |
39 | F | A | -0.7540 | |
40 | T | A | -0.6473 | |
41 | A | A | -0.2056 | |
42 | A | A | -0.3550 | mutated: YA42A |
43 | I | A | 0.0000 | |
44 | S | A | -0.7052 | |
45 | P | A | -1.7047 | |
46 | K | A | -2.1818 | |
47 | S | A | -1.8450 | |
48 | P | A | -2.9798 | |
49 | D | A | -3.4725 | |
50 | D | A | -3.6217 | |
51 | F | A | 0.0000 | |
52 | K | A | -3.1132 | |
53 | S | A | -1.7245 | |
54 | L | A | -0.4505 | |
55 | N | A | -1.6849 | |
56 | E | A | -2.0421 | |
57 | F | A | 0.0000 | |
58 | N | A | -2.0028 | |
59 | A | A | -1.9907 | |
60 | F | A | 0.0000 | |
61 | K | A | -3.1381 | |
62 | K | A | -3.8444 | |
63 | R | A | -3.8871 | |
64 | A | A | 0.0000 | |
65 | E | A | -4.0874 | |
66 | N | A | -3.7836 | |
67 | F | A | 0.0000 | |
68 | T | A | 0.0000 | |
69 | D | A | -3.2543 | |
70 | R | A | -3.0392 | |
71 | S | A | -2.1142 | |
72 | N | A | -2.5981 | |
73 | R | A | -2.7063 | |
74 | D | A | -2.4851 | |
75 | F | A | -1.6245 | |
76 | Q | A | -1.6955 | |
77 | F | A | -0.6117 | |
78 | V | A | 0.0014 | |
79 | Q | A | -0.6979 | |
80 | N | A | 0.0000 | |
81 | Q | A | -1.5105 | |
82 | Y | A | -0.6779 | |
83 | G | A | -0.8649 | |
84 | V | A | 0.0000 | |
85 | V | A | -0.3308 | |
86 | I | A | 0.0000 | |
87 | S | A | 0.0000 | |
88 | K | A | -1.9552 | |
89 | S | A | -2.4214 | |
90 | E | A | -2.8892 | |
91 | L | A | -1.7183 | |
92 | D | A | -2.1251 | |
93 | E | A | -3.3749 | |
94 | I | A | 0.0000 | |
95 | L | A | -2.1561 | |
96 | R | A | -3.2789 | |
97 | D | A | -3.2447 | |
98 | T | A | 0.0000 | |
99 | K | A | -3.2995 | |
100 | K | A | -3.1622 | |
101 | A | A | 0.0000 | |
102 | Q | A | -3.3829 | |
103 | E | A | -3.4750 | |
104 | T | A | 0.0000 | |
105 | A | A | 0.0000 | |
106 | E | A | -3.6291 | |
107 | K | A | -3.5166 | |
108 | I | A | -2.6204 | |
109 | L | A | 0.0000 | |
110 | D | A | -3.5497 | |
111 | K | A | -3.3417 | |
112 | F | A | 0.0000 | |
113 | N | A | -2.6833 | |
114 | D | A | -2.8535 | |
115 | V | A | -1.8554 | |
116 | E | A | -1.9821 | |
117 | V | A | 0.0000 | |
118 | I | A | -1.0068 | |
119 | S | A | -1.3446 | |
120 | G | A | -1.1639 | |
121 | G | A | -1.2527 | |
122 | K | A | -2.0861 | |
123 | S | A | -1.3058 | |
124 | T | A | -0.8756 | |
125 | G | A | -0.7256 | |
126 | F | A | -0.1054 | |
127 | T | A | -1.3587 | |
128 | V | A | 0.0000 | |
129 | G | A | -2.0850 | |
130 | E | A | -1.6841 | |
131 | N | A | -0.8593 | |
132 | K | A | -1.2998 | |
133 | E | A | -1.6129 | |
134 | L | A | 0.7002 | |
135 | L | A | 0.6849 | |
136 | A | A | -0.4150 | |
137 | K | A | -1.3170 | |
138 | P | A | -1.6189 | |
139 | D | A | 0.0000 | |
140 | K | A | -1.2641 | |
141 | G | A | -1.1201 | |
142 | F | A | 0.0000 | |
143 | G | A | -1.7200 | |
144 | R | A | -2.9282 | |
145 | I | A | -2.4101 | |
146 | E | A | -3.3904 | |
147 | D | A | -3.2758 | |
148 | F | A | -2.2350 | |
149 | D | A | -2.6141 | |
150 | F | A | 0.0000 | |
151 | E | A | -2.3208 | |
152 | S | A | -1.7171 | |
153 | V | A | -1.9048 | |
154 | R | A | -2.4072 | |
155 | T | A | -2.0599 | |
156 | Q | A | -2.7815 | |
157 | E | A | -3.6179 | |
158 | G | A | -2.7795 | |
159 | L | A | 0.0000 | |
160 | D | A | -3.5827 | |
161 | R | A | -3.4815 | |
162 | F | A | -2.3061 | |
163 | A | A | -2.5277 | |
164 | A | A | -2.3072 | |
165 | R | A | -2.6377 | |
166 | A | A | 0.0000 | |
167 | K | A | -3.2916 | |
168 | N | A | -2.3975 | |
169 | R | A | -2.4275 | |
170 | S | A | -2.8935 | |
171 | K | A | -2.5472 | |
172 | E | A | -2.5206 | |
173 | A | A | -1.9623 | |
174 | Y | A | -1.8484 | |
175 | Y | A | 0.0000 | |
176 | E | A | -3.7063 | |
177 | E | A | -3.5926 | |
178 | S | A | -2.6659 | |
179 | L | A | 0.0000 | |
180 | R | A | -4.1717 | |
181 | R | A | -4.0158 | |
182 | L | A | 0.0000 | |
183 | Q | A | 0.0000 | |
184 | D | A | -3.8479 | |
185 | N | A | -2.7968 | |
186 | F | A | 0.0000 | |
187 | I | A | 0.0000 | |
188 | R | A | -3.2362 | |
189 | S | A | -2.2643 | |
190 | V | A | 0.0000 | |
191 | E | A | -3.2519 | |
192 | G | A | -2.1629 | |
193 | T | A | -1.7029 | |
194 | F | A | -1.8415 | |
195 | N | A | -2.9699 | |
196 | S | A | -2.6393 | |
197 | D | A | -3.2722 | |
198 | A | A | 0.0000 | |
199 | D | A | -3.7429 | |
200 | D | A | -2.7030 | |
201 | V | A | 0.0000 | |
202 | V | A | 0.0000 | |
203 | E | A | -3.7246 | |
204 | K | A | -2.7517 | |
205 | L | A | 0.0000 | |
206 | R | A | -3.7001 | |
207 | N | A | -2.6651 | |
208 | L | A | 0.0000 | |
209 | P | A | -1.2625 | |
210 | A | A | -2.5000 | |
211 | D | A | -1.6562 | |
212 | D | A | 0.0000 | |
213 | F | A | 0.0000 | |
214 | Y | A | 0.0000 | |
215 | E | A | 0.0000 | |
216 | L | A | 0.0000 | |
217 | F | A | 0.0000 | |
218 | S | A | -0.4906 | |
219 | I | A | 0.0000 | |
220 | Y | A | -0.9118 | |
221 | D | A | -1.3590 | |
222 | E | A | -1.1816 | |
223 | I | A | 0.0000 | |
224 | S | A | 0.0000 | |
225 | F | A | -1.3183 | |
226 | E | A | -2.4624 | |
227 | N | A | -1.6396 | |
228 | F | A | 0.0000 | |
229 | D | A | -3.0982 | |
230 | S | A | -2.5632 | |
231 | E | A | -2.7251 | |
232 | N | A | -2.0757 | |
233 | A | A | -0.9438 | |
234 | L | A | 0.5870 | |
235 | G | A | 0.1751 | |
236 | M | A | 0.5376 | |
237 | A | A | -0.0171 | |
238 | S | A | 0.0000 | |
239 | E | A | -1.9380 | |
240 | S | A | -1.3808 | |
241 | I | A | -1.1088 | |
242 | L | A | 0.0000 | |
243 | E | A | -2.2149 | |
244 | R | A | -1.7697 | |
245 | V | A | 0.0000 | |
246 | R | A | -1.0565 | |
247 | M | A | -0.3503 | |
248 | Y | A | 0.0000 | |
249 | V | A | 0.0000 | |
250 | N | A | -0.7815 | |
251 | A | A | -1.2111 | |
252 | Y | A | -0.7939 | |
253 | F | A | -0.2263 | |
254 | D | A | -1.9580 | |
255 | G | A | -2.1834 | |
256 | K | A | -2.7078 | |
257 | S | A | -2.1813 | |
258 | D | A | -2.4016 | |
259 | M | A | 0.0000 | |
260 | S | A | -1.2950 | |
261 | L | A | -1.2226 | |
262 | K | A | -1.7426 | |
263 | G | A | -0.5316 | |
264 | F | A | 1.0873 |