| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPAVTVDYYVITYGETGHWPWVWQEFEVPGSKSTATISGLKPGVDYTITVYAAGSYSSYYYYGSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:34)
[INFO] Main: Simulation completed successfully. (00:00:34)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.6445 | |
| 2 | S | A | 0.2385 | |
| 3 | D | A | -0.1257 | |
| 4 | V | A | -0.5039 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.1889 | |
| 7 | D | A | -3.3795 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.1041 | |
| 10 | V | A | 0.1242 | |
| 11 | V | A | 1.5536 | |
| 12 | A | A | 0.9079 | |
| 13 | A | A | 0.3289 | |
| 14 | T | A | -0.3398 | |
| 15 | P | A | -1.1224 | |
| 16 | T | A | -1.0005 | |
| 17 | S | A | -0.5285 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7695 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.1509 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.2234 | |
| 24 | A | A | -1.6453 | |
| 25 | P | A | -0.5077 | |
| 26 | A | A | 0.2445 | |
| 27 | V | A | 0.5695 | |
| 28 | T | A | -0.1246 | |
| 29 | V | A | -0.6729 | |
| 30 | D | A | -1.7628 | |
| 31 | Y | A | -1.3681 | |
| 32 | Y | A | 0.0000 | |
| 33 | V | A | 0.0000 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -1.1515 | |
| 36 | Y | A | -0.6778 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.2675 | |
| 39 | T | A | -1.1310 | |
| 40 | G | A | -0.8141 | |
| 41 | H | A | -0.0621 | |
| 42 | W | A | 1.3603 | |
| 43 | P | A | 0.9452 | |
| 44 | W | A | 1.9260 | |
| 45 | V | A | 1.6825 | |
| 46 | W | A | 0.2217 | |
| 47 | Q | A | -1.3769 | |
| 48 | E | A | -2.2599 | |
| 49 | F | A | -1.4395 | |
| 50 | E | A | -1.9001 | |
| 51 | V | A | 0.0000 | |
| 52 | P | A | -1.5888 | |
| 53 | G | A | -1.6420 | |
| 54 | S | A | -1.4150 | |
| 55 | K | A | -2.2572 | |
| 56 | S | A | -1.4374 | |
| 57 | T | A | -0.7707 | |
| 58 | A | A | 0.0000 | |
| 59 | T | A | 0.2436 | |
| 60 | I | A | 0.0000 | |
| 61 | S | A | -0.6588 | |
| 62 | G | A | -1.0297 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.3723 | |
| 65 | P | A | -1.6712 | |
| 66 | G | A | -1.4617 | |
| 67 | V | A | -1.4249 | |
| 68 | D | A | -2.0620 | |
| 69 | Y | A | 0.0000 | |
| 70 | T | A | -1.0268 | |
| 71 | I | A | 0.0000 | |
| 72 | T | A | 0.0000 | |
| 73 | V | A | 0.0000 | |
| 74 | Y | A | 0.4536 | |
| 75 | A | A | 0.0000 | |
| 76 | A | A | 0.0000 | |
| 77 | G | A | 0.6821 | |
| 78 | S | A | 1.2178 | |
| 79 | Y | A | 1.9256 | |
| 80 | S | A | 0.8320 | |
| 81 | S | A | 1.0372 | |
| 82 | Y | A | 2.5025 | |
| 83 | Y | A | 2.6352 | |
| 84 | Y | A | 2.6791 | |
| 85 | Y | A | 2.1122 | |
| 86 | G | A | 0.8252 | |
| 87 | S | A | 0.1360 | |
| 88 | P | A | -0.0004 | |
| 89 | I | A | -0.2718 | |
| 90 | S | A | -0.6820 | |
| 91 | I | A | -0.7410 | |
| 92 | N | A | -1.7263 | |
| 93 | Y | A | -1.4608 | |
| 94 | R | A | -2.5293 | |
| 95 | T | A | -1.6458 |