| Chain sequence(s) |
A: EVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
C: EVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA B: EVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA E: EVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA D: EVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA G: EVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA F: EVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA I: EVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA H: EVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA K: EVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA J: EVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA L: EVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:10:21)
[INFO] Main: Simulation completed successfully. (00:10:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 11 | E | A | -1.8780 | |
| 12 | V | A | 0.2005 | |
| 13 | H | A | -1.1635 | |
| 14 | H | A | -1.9660 | |
| 15 | Q | A | -2.8242 | |
| 16 | K | A | -2.4849 | |
| 17 | L | A | -0.2568 | |
| 18 | V | A | 1.2956 | |
| 19 | F | A | 2.3300 | |
| 20 | F | A | 1.1306 | |
| 21 | A | A | -1.1107 | |
| 22 | E | A | -3.2357 | |
| 23 | D | A | -3.5320 | |
| 24 | V | A | -1.7376 | |
| 25 | G | A | -1.2423 | |
| 26 | S | A | -1.2552 | |
| 27 | N | A | -1.6080 | |
| 28 | K | A | -1.8622 | |
| 29 | G | A | -0.4650 | |
| 30 | A | A | 0.3433 | |
| 31 | I | A | 1.6039 | |
| 32 | I | A | 1.6826 | |
| 33 | G | A | 1.0227 | |
| 34 | L | A | 2.1958 | |
| 35 | M | A | 1.8689 | |
| 36 | V | A | 2.2692 | |
| 37 | G | A | 0.8323 | |
| 38 | G | A | 0.7417 | |
| 39 | V | A | 2.0546 | |
| 40 | V | A | 2.6728 | |
| 41 | I | A | 0.0000 | |
| 42 | A | A | 0.4196 | |
| 11 | E | B | -2.7538 | |
| 12 | V | B | -1.0511 | |
| 13 | H | B | -1.4063 | |
| 14 | H | B | -1.6007 | |
| 15 | Q | B | -2.5885 | |
| 16 | K | B | -2.4410 | |
| 17 | L | B | 0.0000 | |
| 18 | V | B | 0.8761 | |
| 19 | F | B | 0.0000 | |
| 20 | F | B | 0.0000 | |
| 21 | A | B | -1.5838 | |
| 22 | E | B | -3.6125 | |
| 23 | D | B | -4.3993 | |
| 24 | V | B | 0.0000 | |
| 25 | G | B | -1.7235 | |
| 26 | S | B | -1.1747 | |
| 27 | N | B | 0.0000 | |
| 28 | K | B | -1.2248 | |
| 29 | G | B | 0.0000 | |
| 30 | A | B | 0.0000 | |
| 31 | I | B | 0.0000 | |
| 32 | I | B | 0.0000 | |
| 33 | G | B | 1.1935 | |
| 34 | L | B | 1.5666 | |
| 35 | M | B | 0.0000 | |
| 36 | V | B | 1.5493 | |
| 37 | G | B | 0.4332 | |
| 38 | G | B | 0.8101 | |
| 39 | V | B | 1.5297 | |
| 40 | V | B | 2.3576 | |
| 41 | I | B | 0.0000 | |
| 42 | A | B | 0.6324 | |
| 11 | E | C | -3.1672 | |
| 12 | V | C | -1.0311 | |
| 13 | H | C | -1.3374 | |
| 14 | H | C | -1.2918 | |
| 15 | Q | C | -2.1001 | |
| 16 | K | C | -2.1654 | |
| 17 | L | C | 0.0000 | |
| 18 | V | C | 0.2739 | |
| 19 | F | C | 0.0000 | |
| 20 | F | C | 0.0000 | |
| 21 | A | C | -1.6627 | |
| 22 | E | C | -3.4274 | |
| 23 | D | C | -4.2549 | |
| 24 | V | C | 0.0000 | |
| 25 | G | C | -1.6652 | |
| 26 | S | C | -0.8966 | |
| 27 | N | C | 0.0000 | |
| 28 | K | C | -0.7234 | |
| 29 | G | C | 0.0000 | |
| 30 | A | C | 0.0000 | |
| 31 | I | C | 0.3318 | |
| 32 | I | C | 0.0000 | |
| 33 | G | C | 0.7589 | |
| 34 | L | C | 1.3783 | |
| 35 | M | C | 0.0000 | |
| 36 | V | C | 1.3155 | |
| 37 | G | C | -0.0181 | |
| 38 | G | C | 0.0957 | |
| 39 | V | C | 0.9335 | |
| 40 | V | C | 1.8773 | |
| 41 | I | C | 0.0000 | |
| 42 | A | C | 0.5188 | |
| 11 | E | D | -2.9604 | |
| 12 | V | D | -0.7764 | |
| 13 | H | D | -1.0685 | |
| 14 | H | D | -0.9323 | |
| 15 | Q | D | -1.8718 | |
| 16 | K | D | -1.8505 | |
| 17 | L | D | 0.0000 | |
| 18 | V | D | 0.3323 | |
| 19 | F | D | 0.0000 | |
| 20 | F | D | 0.0000 | |
| 21 | A | D | -1.5767 | |
| 22 | E | D | -3.2289 | |
| 23 | D | D | -4.2426 | |
| 24 | V | D | 0.0000 | |
| 25 | G | D | -1.6583 | |
| 26 | S | D | -0.8753 | |
| 27 | N | D | 0.0000 | |
| 28 | K | D | -0.6946 | |
| 29 | G | D | 0.0000 | |
| 30 | A | D | 0.0000 | |
| 31 | I | D | 0.0000 | |
| 32 | I | D | 0.0000 | |
| 33 | G | D | 0.7256 | |
| 34 | L | D | 1.4334 | |
| 35 | M | D | 0.0000 | |
| 36 | V | D | 1.1546 | |
| 37 | G | D | -0.0780 | |
| 38 | G | D | 0.2084 | |
| 39 | V | D | 0.0000 | |
| 40 | V | D | 1.6693 | |
| 41 | I | D | 0.0000 | |
| 42 | A | D | 0.4932 | |
| 11 | E | E | -2.7765 | |
| 12 | V | E | -0.4251 | |
| 13 | H | E | -0.7860 | |
| 14 | H | E | -0.7179 | |
| 15 | Q | E | -1.6855 | |
| 16 | K | E | -1.9515 | |
| 17 | L | E | -0.5297 | |
| 18 | V | E | 0.4194 | |
| 19 | F | E | 0.0000 | |
| 20 | F | E | 0.0000 | |
| 21 | A | E | 0.0000 | |
| 22 | E | E | -3.1512 | |
| 23 | D | E | -4.1741 | |
| 24 | V | E | 0.0000 | |
| 25 | G | E | -1.7312 | |
| 26 | S | E | -1.0408 | |
| 27 | N | E | 0.0000 | |
| 28 | K | E | -0.9467 | |
| 29 | G | E | 0.0000 | |
| 30 | A | E | 0.0000 | |
| 31 | I | E | 0.0000 | |
| 32 | I | E | 0.0000 | |
| 33 | G | E | 0.7482 | |
| 34 | L | E | 1.4929 | |
| 35 | M | E | 0.0000 | |
| 36 | V | E | 1.1816 | |
| 37 | G | E | -0.0541 | |
| 38 | G | E | -0.0180 | |
| 39 | V | E | 0.0000 | |
| 40 | V | E | 1.5489 | |
| 41 | I | E | 0.0000 | |
| 42 | A | E | 0.3516 | |
| 11 | E | F | -2.6588 | |
| 12 | V | F | -0.1901 | |
| 13 | H | F | -0.6410 | |
| 14 | H | F | -0.6355 | |
| 15 | Q | F | -1.6519 | |
| 16 | K | F | -1.7518 | |
| 17 | L | F | -0.4879 | |
| 18 | V | F | 0.2762 | |
| 19 | F | F | 0.0000 | |
| 20 | F | F | 0.0000 | |
| 21 | A | F | -1.4879 | |
| 22 | E | F | -3.0686 | |
| 23 | D | F | -4.0101 | |
| 24 | V | F | 0.0000 | |
| 25 | G | F | -1.7361 | |
| 26 | S | F | -1.1315 | |
| 27 | N | F | 0.0000 | |
| 28 | K | F | -1.6063 | |
| 29 | G | F | 0.0000 | |
| 30 | A | F | 0.0000 | |
| 31 | I | F | 0.0000 | |
| 32 | I | F | 0.0000 | |
| 33 | G | F | 0.7219 | |
| 34 | L | F | 1.4230 | |
| 35 | M | F | 0.0000 | |
| 36 | V | F | 1.1910 | |
| 37 | G | F | -0.1450 | |
| 38 | G | F | 0.0768 | |
| 39 | V | F | 0.0000 | |
| 40 | V | F | 1.3855 | |
| 41 | I | F | 0.0000 | |
| 42 | A | F | 0.3455 | |
| 11 | E | G | -2.5980 | |
| 12 | V | G | -0.0645 | |
| 13 | H | G | -0.5481 | |
| 14 | H | G | -0.5791 | |
| 15 | Q | G | -1.5294 | |
| 16 | K | G | -1.8993 | |
| 17 | L | G | -0.5008 | |
| 18 | V | G | 0.2987 | |
| 19 | F | G | 0.0000 | |
| 20 | F | G | 0.0000 | |
| 21 | A | G | 0.0000 | |
| 22 | E | G | -3.1169 | |
| 23 | D | G | -4.1377 | |
| 24 | V | G | 0.0000 | |
| 25 | G | G | -1.7267 | |
| 26 | S | G | -1.1348 | |
| 27 | N | G | 0.0000 | |
| 28 | K | G | -1.0726 | |
| 29 | G | G | 0.0000 | |
| 30 | A | G | 0.0000 | |
| 31 | I | G | 0.0000 | |
| 32 | I | G | 0.0000 | |
| 33 | G | G | 0.6465 | |
| 34 | L | G | 1.3373 | |
| 35 | M | G | 0.0000 | |
| 36 | V | G | 1.1846 | |
| 37 | G | G | -0.0603 | |
| 38 | G | G | -0.0291 | |
| 39 | V | G | 0.0000 | |
| 40 | V | G | 1.3131 | |
| 41 | I | G | 0.0000 | |
| 42 | A | G | 0.4048 | |
| 11 | E | H | -2.4606 | |
| 12 | V | H | 0.1602 | |
| 13 | H | H | -0.4243 | |
| 14 | H | H | -0.5200 | |
| 15 | Q | H | -1.5654 | |
| 16 | K | H | -1.7724 | |
| 17 | L | H | -0.5007 | |
| 18 | V | H | 0.1923 | |
| 19 | F | H | 0.0000 | |
| 20 | F | H | 0.0000 | |
| 21 | A | H | 0.0000 | |
| 22 | E | H | -3.2568 | |
| 23 | D | H | -4.2289 | |
| 24 | V | H | 0.0000 | |
| 25 | G | H | -1.8362 | |
| 26 | S | H | -1.0620 | |
| 27 | N | H | 0.0000 | |
| 28 | K | H | -1.0423 | |
| 29 | G | H | 0.0000 | |
| 30 | A | H | 0.0000 | |
| 31 | I | H | 0.0000 | |
| 32 | I | H | 0.0000 | |
| 33 | G | H | 0.6822 | |
| 34 | L | H | 1.3885 | |
| 35 | M | H | 0.0000 | |
| 36 | V | H | 1.2436 | |
| 37 | G | H | -0.0780 | |
| 38 | G | H | 0.1023 | |
| 39 | V | H | 0.0000 | |
| 40 | V | H | 1.3778 | |
| 41 | I | H | 0.0000 | |
| 42 | A | H | 0.3634 | |
| 11 | E | I | -2.3715 | |
| 12 | V | I | 0.2227 | |
| 13 | H | I | -0.3688 | |
| 14 | H | I | -0.5234 | |
| 15 | Q | I | -1.5101 | |
| 16 | K | I | -1.6883 | |
| 17 | L | I | -0.4157 | |
| 18 | V | I | 0.2604 | |
| 19 | F | I | 0.0000 | |
| 20 | F | I | 0.0000 | |
| 21 | A | I | -1.5997 | |
| 22 | E | I | -3.1754 | |
| 23 | D | I | -4.1969 | |
| 24 | V | I | 0.0000 | |
| 25 | G | I | -1.6681 | |
| 26 | S | I | -1.1403 | |
| 27 | N | I | 0.0000 | |
| 28 | K | I | -1.2551 | |
| 29 | G | I | 0.0000 | |
| 30 | A | I | 0.0000 | |
| 31 | I | I | 0.0000 | |
| 32 | I | I | 0.0000 | |
| 33 | G | I | 0.6145 | |
| 34 | L | I | 1.4657 | |
| 35 | M | I | 0.0000 | |
| 36 | V | I | 1.1293 | |
| 37 | G | I | -0.1376 | |
| 38 | G | I | 0.2090 | |
| 39 | V | I | 0.0000 | |
| 40 | V | I | 1.5902 | |
| 41 | I | I | 0.0000 | |
| 42 | A | I | 0.3792 | |
| 11 | E | J | -2.6033 | |
| 12 | V | J | -0.0308 | |
| 13 | H | J | -0.8665 | |
| 14 | H | J | -0.9815 | |
| 15 | Q | J | -1.8538 | |
| 16 | K | J | -1.8238 | |
| 17 | L | J | -0.3542 | |
| 18 | V | J | 0.2921 | |
| 19 | F | J | 0.0000 | |
| 20 | F | J | 0.0000 | |
| 21 | A | J | -1.6790 | |
| 22 | E | J | -3.1484 | |
| 23 | D | J | -4.0134 | |
| 24 | V | J | 0.0000 | |
| 25 | G | J | -1.6358 | |
| 26 | S | J | -1.1323 | |
| 27 | N | J | 0.0000 | |
| 28 | K | J | -1.4376 | |
| 29 | G | J | 0.0000 | |
| 30 | A | J | 0.0000 | |
| 31 | I | J | 0.0000 | |
| 32 | I | J | 0.0000 | |
| 33 | G | J | 0.5593 | |
| 34 | L | J | 1.3708 | |
| 35 | M | J | 0.0000 | |
| 36 | V | J | 1.1540 | |
| 37 | G | J | -0.1737 | |
| 38 | G | J | 0.1540 | |
| 39 | V | J | 0.0000 | |
| 40 | V | J | 1.8302 | |
| 41 | I | J | 0.0000 | |
| 42 | A | J | 0.3742 | |
| 11 | E | K | -2.7016 | |
| 12 | V | K | -1.0498 | |
| 13 | H | K | -1.6952 | |
| 14 | H | K | -2.0102 | |
| 15 | Q | K | -2.8378 | |
| 16 | K | K | -2.0705 | |
| 17 | L | K | -0.2915 | |
| 18 | V | K | 0.7559 | |
| 19 | F | K | 0.0000 | |
| 20 | F | K | 0.0000 | |
| 21 | A | K | -1.1421 | |
| 22 | E | K | -3.0760 | |
| 23 | D | K | -3.9305 | |
| 24 | V | K | 0.0000 | |
| 25 | G | K | -1.5477 | |
| 26 | S | K | -1.3067 | |
| 27 | N | K | 0.0000 | |
| 28 | K | K | -1.4324 | |
| 29 | G | K | 0.0000 | |
| 30 | A | K | 0.0000 | |
| 31 | I | K | 0.0000 | |
| 32 | I | K | 0.0000 | |
| 33 | G | K | 0.9828 | |
| 34 | L | K | 1.8439 | |
| 35 | M | K | 0.0000 | |
| 36 | V | K | 1.5292 | |
| 37 | G | K | 0.2251 | |
| 38 | G | K | 0.8271 | |
| 39 | V | K | 0.0000 | |
| 40 | V | K | 2.1339 | |
| 41 | I | K | 0.0000 | |
| 42 | A | K | 0.6625 | |
| 11 | E | L | -2.1800 | |
| 12 | V | L | -0.4828 | |
| 13 | H | L | -1.9105 | |
| 14 | H | L | -2.3477 | |
| 15 | Q | L | -2.9371 | |
| 16 | K | L | -2.1956 | |
| 17 | L | L | 0.0586 | |
| 18 | V | L | 1.5952 | |
| 19 | F | L | 1.7515 | |
| 20 | F | L | 1.7695 | |
| 21 | A | L | -0.2957 | |
| 22 | E | L | -2.8487 | |
| 23 | D | L | -3.2305 | |
| 24 | V | L | -1.3803 | |
| 25 | G | L | -1.0566 | |
| 26 | S | L | -1.2129 | |
| 27 | N | L | 0.0000 | |
| 28 | K | L | -1.7161 | |
| 29 | G | L | -0.5756 | |
| 30 | A | L | 0.0000 | |
| 31 | I | L | 0.6404 | |
| 32 | I | L | 1.3412 | |
| 33 | G | L | 1.1687 | |
| 34 | L | L | 2.2946 | |
| 35 | M | L | 1.9101 | |
| 36 | V | L | 1.8859 | |
| 37 | G | L | 0.3111 | |
| 38 | G | L | 0.5039 | |
| 39 | V | L | 1.8132 | |
| 40 | V | L | 2.8299 | |
| 41 | I | L | 2.2258 | |
| 42 | A | L | 0.8955 |