| Chain sequence(s) |
H: AWVDQTPRTATKETGESLTINCVLKGSGFELSDTGWYRTKLGSTNEQSISIGGRYVETVNKGSKSFSLRISDLRVEDSGTYKCVAYYKVGDGGKGKIRTVEGEKGAGTALTVKAA
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:42)
[INFO] Main: Simulation completed successfully. (00:01:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | H | -0.1811 | |
| 2 | W | H | 0.2007 | |
| 3 | V | H | 0.0000 | |
| 4 | D | H | -1.3246 | |
| 5 | Q | H | 0.0000 | |
| 6 | T | H | -1.1439 | |
| 7 | P | H | -1.2700 | |
| 8 | R | H | -2.0339 | |
| 9 | T | H | -1.0078 | |
| 10 | A | H | -0.5670 | |
| 11 | T | H | -0.6750 | |
| 12 | K | H | -1.5345 | |
| 13 | E | H | -2.2790 | |
| 14 | T | H | -2.1235 | |
| 15 | G | H | -2.2512 | |
| 16 | E | H | -2.5180 | |
| 17 | S | H | -1.9761 | |
| 18 | L | H | 0.0000 | |
| 19 | T | H | -0.8868 | |
| 20 | I | H | 0.0000 | |
| 21 | N | H | -1.0562 | |
| 22 | C | H | 0.0000 | |
| 23 | V | H | -0.6762 | |
| 24 | L | H | 0.0000 | |
| 25 | K | H | -0.7917 | |
| 26 | G | H | -0.7306 | |
| 27 | S | H | -0.8049 | |
| 28 | G | H | -1.0264 | |
| 29 | F | H | -0.9060 | |
| 30 | E | H | -2.0325 | |
| 31 | L | H | 0.0000 | |
| 32 | S | H | -1.5148 | |
| 33 | D | H | -1.9289 | |
| 34 | T | H | -1.1351 | |
| 35 | G | H | -0.4669 | |
| 36 | W | H | 0.0000 | |
| 37 | Y | H | -0.8633 | |
| 38 | R | H | -1.0521 | |
| 39 | T | H | -1.1969 | |
| 40 | K | H | -1.0073 | |
| 41 | L | H | 0.6048 | |
| 42 | G | H | -0.0935 | |
| 43 | S | H | -0.6268 | |
| 44 | T | H | -1.0126 | |
| 45 | N | H | -2.0289 | |
| 46 | E | H | -2.1208 | |
| 47 | Q | H | -1.9485 | |
| 48 | S | H | -0.7948 | |
| 49 | I | H | -0.0362 | |
| 50 | S | H | 0.4537 | |
| 51 | I | H | 1.1113 | |
| 52 | G | H | 0.2955 | |
| 53 | G | H | -0.2860 | |
| 54 | R | H | -0.7792 | |
| 55 | Y | H | 0.0000 | |
| 56 | V | H | 0.9233 | |
| 57 | E | H | 0.3123 | |
| 58 | T | H | -0.2871 | |
| 59 | V | H | -0.7538 | |
| 60 | N | H | -1.9625 | |
| 61 | K | H | -3.0128 | |
| 62 | G | H | -1.9966 | |
| 63 | S | H | -1.5638 | |
| 64 | K | H | -1.9778 | |
| 65 | S | H | -1.1670 | |
| 66 | F | H | 0.0000 | |
| 67 | S | H | -0.5349 | |
| 68 | L | H | 0.0000 | |
| 69 | R | H | -1.4295 | |
| 70 | I | H | 0.0000 | |
| 71 | S | H | -1.7155 | |
| 72 | D | H | -2.4882 | |
| 73 | L | H | 0.0000 | |
| 74 | R | H | -2.2188 | |
| 75 | V | H | -0.6551 | |
| 76 | E | H | -1.6263 | |
| 77 | D | H | 0.0000 | |
| 78 | S | H | 0.0000 | |
| 79 | G | H | 0.0000 | |
| 80 | T | H | -0.3228 | |
| 81 | Y | H | 0.0000 | |
| 82 | K | H | -0.7729 | |
| 83 | C | H | 0.0000 | |
| 84 | V | H | 0.0000 | |
| 85 | A | H | 0.0000 | |
| 86 | Y | H | -0.8941 | |
| 87 | Y | H | 0.0000 | |
| 88 | K | H | -1.1862 | |
| 89 | V | H | -0.9379 | |
| 90 | G | H | -2.3009 | |
| 91 | D | H | -3.1450 | |
| 92 | G | H | -2.1575 | |
| 93 | G | H | -2.2605 | |
| 94 | K | H | -3.1647 | |
| 95 | G | H | -2.6308 | |
| 96 | K | H | -2.4284 | |
| 97 | I | H | -0.8561 | |
| 98 | R | H | -1.9914 | |
| 99 | T | H | -0.4857 | |
| 100 | V | H | 0.4562 | |
| 101 | E | H | -0.6751 | |
| 102 | G | H | -1.1396 | |
| 103 | E | H | -1.1900 | |
| 104 | K | H | -1.4720 | |
| 105 | G | H | 0.0000 | |
| 106 | A | H | -0.7860 | |
| 107 | G | H | 0.0000 | |
| 108 | T | H | 0.0000 | |
| 109 | A | H | -0.4079 | |
| 110 | L | H | 0.0000 | |
| 111 | T | H | -0.5288 | |
| 112 | V | H | 0.0000 | |
| 113 | K | H | -1.7729 | |
| 114 | A | H | -0.8138 | |
| 115 | A | H | -0.6553 |