| Chain sequence(s) |
A: VQLVESGGDLVQFGGSLRLSCAASAFTFSTYYMTWVRQPPGKGLEWVSGINSDGSTYYRDSVKGRFTISRDNAKNMLYLEMISLKPEDTAVYYCAGGAGNAWLFGDWGQGTMVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:39)
[INFO] Main: Simulation completed successfully. (00:02:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.2917 | |
| 2 | Q | A | -0.1553 | |
| 3 | L | A | 0.0000 | |
| 4 | V | A | 0.4706 | |
| 5 | E | A | 0.0000 | |
| 6 | S | A | -0.6783 | |
| 7 | G | A | -1.1214 | |
| 8 | G | A | -0.9385 | |
| 9 | D | A | -1.2050 | |
| 10 | L | A | 0.7074 | |
| 11 | V | A | 0.0661 | |
| 12 | Q | A | -0.2281 | |
| 13 | F | A | 0.7988 | |
| 14 | G | A | -0.0031 | |
| 15 | G | A | 0.1404 | |
| 16 | S | A | -0.5243 | |
| 17 | L | A | -1.2395 | |
| 18 | R | A | -2.4628 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.5513 | |
| 21 | C | A | 0.0000 | |
| 22 | A | A | -0.2747 | |
| 23 | A | A | 0.0000 | |
| 24 | S | A | -0.0020 | |
| 25 | A | A | 0.4866 | |
| 26 | F | A | 0.4838 | |
| 27 | T | A | 0.0871 | |
| 28 | F | A | 0.0000 | |
| 29 | S | A | -0.9286 | |
| 30 | T | A | -0.5072 | |
| 31 | Y | A | -0.3288 | |
| 32 | Y | A | -0.3834 | |
| 33 | M | A | 0.0000 | |
| 34 | T | A | 0.0000 | |
| 35 | W | A | 0.0000 | |
| 36 | V | A | 0.0000 | |
| 37 | R | A | 0.0000 | |
| 38 | Q | A | -0.3423 | |
| 39 | P | A | 0.0000 | |
| 40 | P | A | -1.1882 | |
| 41 | G | A | -1.4237 | |
| 42 | K | A | -2.0269 | |
| 43 | G | A | -0.8155 | |
| 44 | L | A | 0.7146 | |
| 45 | E | A | 0.1100 | |
| 46 | W | A | 0.3062 | |
| 47 | V | A | 0.0000 | |
| 48 | S | A | 0.0000 | |
| 49 | G | A | 0.0000 | |
| 50 | I | A | 0.0000 | |
| 51 | N | A | -1.1337 | |
| 52 | S | A | -1.5151 | |
| 53 | D | A | -2.0949 | |
| 54 | G | A | -1.3304 | |
| 55 | S | A | -0.7039 | |
| 56 | T | A | 0.0130 | |
| 57 | Y | A | 0.2791 | |
| 58 | Y | A | -0.7754 | |
| 59 | R | A | -1.8294 | |
| 60 | D | A | -2.7313 | |
| 61 | S | A | -1.8762 | |
| 62 | V | A | 0.0000 | |
| 63 | K | A | -2.7034 | |
| 64 | G | A | -1.6409 | |
| 65 | R | A | -1.0630 | |
| 66 | F | A | 0.0000 | |
| 67 | T | A | -0.8682 | |
| 68 | I | A | 0.0000 | |
| 69 | S | A | -0.5866 | |
| 70 | R | A | -0.9837 | |
| 71 | D | A | -1.4611 | |
| 72 | N | A | -1.7465 | |
| 73 | A | A | -1.4081 | |
| 74 | K | A | -2.2060 | |
| 75 | N | A | -1.5317 | |
| 76 | M | A | -0.8668 | |
| 77 | L | A | 0.0000 | |
| 78 | Y | A | -0.7205 | |
| 79 | L | A | 0.0000 | |
| 80 | E | A | -1.7841 | |
| 81 | M | A | 0.0000 | |
| 82 | I | A | 0.0355 | |
| 83 | S | A | -0.0155 | |
| 84 | L | A | 0.0000 | |
| 85 | K | A | -1.0851 | |
| 86 | P | A | -1.1782 | |
| 87 | E | A | -1.9828 | |
| 88 | D | A | 0.0000 | |
| 89 | T | A | -0.6978 | |
| 90 | A | A | 0.0000 | |
| 91 | V | A | 0.4299 | |
| 92 | Y | A | 0.0000 | |
| 93 | Y | A | 0.3911 | |
| 94 | C | A | 0.0000 | |
| 95 | A | A | 0.0000 | |
| 96 | G | A | 0.0000 | |
| 97 | G | A | 0.0000 | |
| 98 | A | A | -0.0348 | |
| 99 | G | A | -0.6786 | |
| 100 | N | A | -0.9108 | |
| 101 | A | A | 0.4135 | |
| 102 | W | A | 1.6424 | |
| 103 | L | A | 1.9337 | |
| 104 | F | A | 1.2546 | |
| 105 | G | A | 0.6539 | |
| 106 | D | A | 0.4342 | |
| 107 | W | A | 0.4202 | |
| 108 | G | A | -0.0887 | |
| 109 | Q | A | -0.9566 | |
| 110 | G | A | 0.0000 | |
| 111 | T | A | -0.1682 | |
| 112 | M | A | 0.3194 | |
| 113 | V | A | 0.0000 | |
| 114 | T | A | -0.0279 | |
| 115 | V | A | 0.0000 | |
| 116 | S | A | -0.1030 | |
| 117 | S | A | -0.3351 |