Project name: Npl3 RRM 1.2

Status: done

Started: 2025-12-29 08:31:25
Settings
Chain sequence(s) A: ELSNTRLFVRPFPLDVQESELNEIFGPFGPMKEVKILNGFAFVEFEEAESAAKAIEEVHGKSFANQPLEVVYSKLPA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:03)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:03)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:03)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:03)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:03)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:37)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:38)
Show buried residues

Minimal score value
-3.1348
Maximal score value
0.9744
Average score
-1.0497
Total score value
-80.8234

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
28 E A -1.4290
29 L A -0.2956
30 S A -0.7208
31 N A -1.7948
32 T A -1.3346
33 R A -0.9862
34 L A 0.0000
35 F A -0.1171
36 V A 0.0000
37 R A -0.0734
38 P A -0.6880
39 F A 0.0000
40 P A -0.2730
41 L A 0.2614
42 D A -1.6346
43 V A 0.0000
44 Q A -2.3279
45 E A -2.9830
46 S A -2.5022
47 E A -2.7651
48 L A 0.0000
49 N A -3.1348
50 E A -3.0721
51 I A -1.7281
52 F A 0.0000
53 G A -1.7829
54 P A -1.4306
55 F A 0.0000
56 G A -1.0732
57 P A -1.5306
58 M A -1.6270
59 K A -1.9907
60 E A -2.5619
61 V A -1.4500
62 K A -0.8639
63 I A 0.1400
64 L A 0.7813
65 N A -0.3759
66 G A 0.0000
67 F A 0.9744
68 A A 0.0000
69 F A 0.0000
70 V A 0.0000
71 E A -1.7387
72 F A 0.0000
73 E A -3.0178
74 E A -2.5045
75 A A -2.0477
76 E A -2.6082
77 S A 0.0000
78 A A 0.0000
79 A A -1.8491
80 K A -2.4469
81 A A 0.0000
82 I A -1.8076
83 E A -3.0278
84 E A -3.1055
85 V A 0.0000
86 H A -1.7921
87 G A -1.7521
88 K A -1.9935
89 S A -1.3335
90 F A -0.4144
91 A A -0.6247
92 N A -1.6138
93 Q A -1.9316
94 P A -1.5673
95 L A 0.0000
96 E A -0.7239
97 V A 0.0000
98 V A -0.2153
99 Y A -0.3312
100 S A 0.0000
101 K A -1.2796
102 L A -0.2544
103 P A -0.2007
104 A A -0.2516
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Laboratory of Theory of Biopolymers 2018