| Chain sequence(s) |
A: GTCNTPGCTCDPWPVCTHNGLPTCGETCFG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:08)
[INFO] Main: Simulation completed successfully. (00:00:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.2757 | |
| 2 | T | A | -0.2128 | |
| 3 | C | A | -0.7293 | |
| 4 | N | A | -1.2635 | |
| 5 | T | A | -1.0304 | |
| 6 | P | A | -0.8617 | |
| 7 | G | A | -1.0900 | |
| 8 | C | A | -1.1323 | |
| 9 | T | A | -1.0022 | |
| 10 | C | A | -0.6280 | |
| 11 | D | A | -1.6234 | |
| 12 | P | A | -0.5744 | |
| 13 | W | A | 0.5786 | |
| 14 | P | A | 0.4655 | |
| 15 | V | A | 0.5607 | |
| 16 | C | A | 0.0000 | |
| 17 | T | A | 0.0000 | |
| 18 | H | A | -1.4057 | |
| 19 | N | A | -1.7324 | |
| 20 | G | A | -1.0793 | |
| 21 | L | A | 0.3359 | |
| 22 | P | A | -0.2292 | |
| 23 | T | A | -0.1841 | |
| 24 | C | A | -0.5077 | |
| 25 | G | A | -0.4543 | |
| 26 | E | A | -0.4285 | |
| 27 | T | A | 0.2057 | |
| 28 | C | A | 0.0000 | |
| 29 | F | A | 0.8455 | |
| 30 | G | A | 0.0535 |