Project name: query_structure

Status: done

Started: 2026-03-16 23:43:50
Settings
Chain sequence(s) A: GTCNTPGCTCDPWPVCTHNGLPTCGETCFG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:08)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:08)
Show buried residues

Minimal score value
-1.7324
Maximal score value
0.8455
Average score
-0.4466
Total score value
-13.3995

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.2757
2 T A -0.2128
3 C A -0.7293
4 N A -1.2635
5 T A -1.0304
6 P A -0.8617
7 G A -1.0900
8 C A -1.1323
9 T A -1.0022
10 C A -0.6280
11 D A -1.6234
12 P A -0.5744
13 W A 0.5786
14 P A 0.4655
15 V A 0.5607
16 C A 0.0000
17 T A 0.0000
18 H A -1.4057
19 N A -1.7324
20 G A -1.0793
21 L A 0.3359
22 P A -0.2292
23 T A -0.1841
24 C A -0.5077
25 G A -0.4543
26 E A -0.4285
27 T A 0.2057
28 C A 0.0000
29 F A 0.8455
30 G A 0.0535
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Laboratory of Theory of Biopolymers 2018