| Chain sequence(s) |
A: MDAMKRGLCCVLLLCGAVFVSPEAAAKAKFVAAWTLKAAAAAYYVKVNIRDIAAYLYIEDLLSRAAYAVYNPALGYAAYGQDWRVKSAAAYSSQESLSDLAAYDACLGLLAVAAYYTDASFANRGPGPGRTGQDWRVKSAFKCSGPGPGSQESLSDLGAIESLRGPGPGLLLLYIEDLLSRCSSGPGPGLLNYAVYNPALGYSQGPGPGRIKILCATYVKVNIRGPGPGSDACLGLLAVAAVAAGPGPGVYREYTDASFANRKEGPGPGYTDASFANRKERGPEEEIFMYLLTVFLITQMIGSALFAV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:33)
[INFO] Main: Simulation completed successfully. (00:03:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -0.2903 | |
| 2 | D | A | -2.0359 | |
| 3 | A | A | -1.1691 | |
| 4 | M | A | -0.6406 | |
| 5 | K | A | -1.8551 | |
| 6 | R | A | -1.8007 | |
| 7 | G | A | -0.0841 | |
| 8 | L | A | 1.5182 | |
| 9 | C | A | 1.8748 | |
| 10 | C | A | 2.2984 | |
| 11 | V | A | 3.2401 | |
| 12 | L | A | 3.7619 | |
| 13 | L | A | 3.6389 | |
| 14 | L | A | 2.9643 | |
| 15 | C | A | 3.0244 | |
| 16 | G | A | 2.6697 | |
| 17 | A | A | 1.9409 | |
| 18 | V | A | 2.7113 | |
| 19 | F | A | 3.2756 | |
| 20 | V | A | 2.4721 | |
| 21 | S | A | 0.5301 | |
| 22 | P | A | -0.5330 | |
| 23 | E | A | -2.1386 | |
| 24 | A | A | -0.7645 | |
| 25 | A | A | -0.0364 | |
| 26 | A | A | -0.9742 | |
| 27 | K | A | -1.6838 | |
| 28 | A | A | -0.1763 | |
| 29 | K | A | -0.2862 | |
| 30 | F | A | 1.4232 | |
| 31 | V | A | 1.3842 | |
| 32 | A | A | 1.0300 | |
| 33 | A | A | 1.0757 | |
| 34 | W | A | 1.7113 | |
| 35 | T | A | 1.1651 | |
| 36 | L | A | 1.4188 | |
| 37 | K | A | -0.2534 | |
| 38 | A | A | 0.4072 | |
| 39 | A | A | 0.9924 | |
| 40 | A | A | 0.9698 | |
| 41 | A | A | 1.1311 | |
| 42 | A | A | 1.3010 | |
| 43 | Y | A | 2.1752 | |
| 44 | Y | A | 2.4608 | |
| 45 | V | A | 2.1905 | |
| 46 | K | A | 0.6452 | |
| 47 | V | A | 0.8293 | |
| 48 | N | A | 0.3455 | |
| 49 | I | A | 1.4706 | |
| 50 | R | A | -0.5468 | |
| 51 | D | A | 0.0635 | |
| 52 | I | A | 2.1969 | |
| 53 | A | A | 1.6689 | |
| 54 | A | A | 1.4574 | |
| 55 | Y | A | 2.6137 | |
| 56 | L | A | 2.6228 | |
| 57 | Y | A | 2.5901 | |
| 58 | I | A | 2.0817 | |
| 59 | E | A | -0.1356 | |
| 60 | D | A | -0.4773 | |
| 61 | L | A | 0.5917 | |
| 62 | L | A | 0.8829 | |
| 63 | S | A | -0.5832 | |
| 64 | R | A | -1.1728 | |
| 65 | A | A | 0.1811 | |
| 66 | A | A | 0.8941 | |
| 67 | Y | A | 1.0840 | |
| 68 | A | A | 0.9295 | |
| 69 | V | A | 1.9985 | |
| 70 | Y | A | 1.7986 | |
| 71 | N | A | 1.2618 | |
| 72 | P | A | 0.9077 | |
| 73 | A | A | 0.8433 | |
| 74 | L | A | 1.9619 | |
| 75 | G | A | 1.4686 | |
| 76 | Y | A | 2.2591 | |
| 77 | A | A | 0.0000 | |
| 78 | A | A | 0.7774 | |
| 79 | Y | A | 1.5155 | |
| 80 | G | A | 0.4891 | |
| 81 | Q | A | -0.2755 | |
| 82 | D | A | -0.3765 | |
| 83 | W | A | -0.0106 | |
| 84 | R | A | -1.2205 | |
| 85 | V | A | 0.0224 | |
| 86 | K | A | -1.1436 | |
| 87 | S | A | -0.5520 | |
| 88 | A | A | 0.0053 | |
| 89 | A | A | -0.1474 | |
| 90 | A | A | -0.3910 | |
| 91 | Y | A | 0.1132 | |
| 92 | S | A | -0.4603 | |
| 93 | S | A | -0.6169 | |
| 94 | Q | A | -1.3586 | |
| 95 | E | A | -2.0379 | |
| 96 | S | A | -0.8818 | |
| 97 | L | A | 0.4832 | |
| 98 | S | A | -0.8486 | |
| 99 | D | A | -1.4131 | |
| 100 | L | A | 0.4489 | |
| 101 | A | A | 0.0602 | |
| 102 | A | A | 0.0146 | |
| 103 | Y | A | 0.4004 | |
| 104 | D | A | -0.8963 | |
| 105 | A | A | 0.0458 | |
| 106 | C | A | 0.7280 | |
| 107 | L | A | 0.2254 | |
| 108 | G | A | 0.5802 | |
| 109 | L | A | 1.9667 | |
| 110 | L | A | 1.3779 | |
| 111 | A | A | 0.0000 | |
| 112 | V | A | 2.2791 | |
| 113 | A | A | 1.8485 | |
| 114 | A | A | 1.3960 | |
| 115 | Y | A | 2.3342 | |
| 116 | Y | A | 2.2193 | |
| 117 | T | A | 1.0532 | |
| 118 | D | A | 0.4230 | |
| 119 | A | A | 0.1784 | |
| 120 | S | A | -0.2485 | |
| 121 | F | A | -0.4269 | |
| 122 | A | A | -1.0803 | |
| 123 | N | A | -2.0567 | |
| 124 | R | A | -2.3609 | |
| 125 | G | A | -1.5761 | |
| 126 | P | A | -1.2762 | |
| 127 | G | A | -1.0532 | |
| 128 | P | A | -0.9932 | |
| 129 | G | A | -1.2355 | |
| 130 | R | A | -1.1627 | |
| 131 | T | A | -0.8928 | |
| 132 | G | A | -0.9790 | |
| 133 | Q | A | -1.0292 | |
| 134 | D | A | -1.0257 | |
| 135 | W | A | -0.0041 | |
| 136 | R | A | -0.5953 | |
| 137 | V | A | -0.5859 | |
| 138 | K | A | -0.9315 | |
| 139 | S | A | -0.6690 | |
| 140 | A | A | -0.5825 | |
| 141 | F | A | -0.1525 | |
| 142 | K | A | -1.3546 | |
| 143 | C | A | -0.3104 | |
| 144 | S | A | -0.7888 | |
| 145 | G | A | -1.1674 | |
| 146 | P | A | -0.9300 | |
| 147 | G | A | -0.6346 | |
| 148 | P | A | -0.5798 | |
| 149 | G | A | 0.0000 | |
| 150 | S | A | 0.0000 | |
| 151 | Q | A | -1.8419 | |
| 152 | E | A | -2.7899 | |
| 153 | S | A | -1.7069 | |
| 154 | L | A | -0.9867 | |
| 155 | S | A | -1.8776 | |
| 156 | D | A | -2.4130 | |
| 157 | L | A | -0.9093 | |
| 158 | G | A | -1.3244 | |
| 159 | A | A | -0.8104 | |
| 160 | I | A | -0.6845 | |
| 161 | E | A | -1.8173 | |
| 162 | S | A | -0.8845 | |
| 163 | L | A | 0.1408 | |
| 164 | R | A | -1.7921 | |
| 165 | G | A | -0.9810 | |
| 166 | P | A | -0.0600 | |
| 167 | G | A | -0.2830 | |
| 168 | P | A | 0.2213 | |
| 169 | G | A | 0.0557 | |
| 170 | L | A | 0.9574 | |
| 171 | L | A | 1.8360 | |
| 172 | L | A | 1.8169 | |
| 173 | L | A | 1.2687 | |
| 174 | Y | A | 2.1769 | |
| 175 | I | A | 1.6024 | |
| 176 | E | A | -0.2252 | |
| 177 | D | A | 0.0377 | |
| 178 | L | A | 0.6685 | |
| 179 | L | A | 0.8304 | |
| 180 | S | A | -0.4944 | |
| 181 | R | A | -1.4887 | |
| 182 | C | A | -0.5864 | |
| 183 | S | A | -0.5718 | |
| 184 | S | A | -0.9929 | |
| 185 | G | A | -1.0020 | |
| 186 | P | A | -0.8304 | |
| 187 | G | A | -0.8368 | |
| 188 | P | A | -0.3942 | |
| 189 | G | A | -0.3351 | |
| 190 | L | A | 0.6163 | |
| 191 | L | A | 0.9002 | |
| 192 | N | A | 1.0002 | |
| 193 | Y | A | 2.3044 | |
| 194 | A | A | 2.2713 | |
| 195 | V | A | 2.8213 | |
| 196 | Y | A | 2.3954 | |
| 197 | N | A | 1.5968 | |
| 198 | P | A | 1.2495 | |
| 199 | A | A | 1.0743 | |
| 200 | L | A | 2.1831 | |
| 201 | G | A | 1.8392 | |
| 202 | Y | A | 1.6512 | |
| 203 | S | A | -0.0245 | |
| 204 | Q | A | -1.1739 | |
| 205 | G | A | -0.9124 | |
| 206 | P | A | -0.8932 | |
| 207 | G | A | -1.3077 | |
| 208 | P | A | -0.9959 | |
| 209 | G | A | -1.1402 | |
| 210 | R | A | -0.9614 | |
| 211 | I | A | -0.0914 | |
| 212 | K | A | -0.7324 | |
| 213 | I | A | 1.1232 | |
| 214 | L | A | 0.9613 | |
| 215 | C | A | 0.5663 | |
| 216 | A | A | 0.4295 | |
| 217 | T | A | 0.4964 | |
| 218 | Y | A | 0.0000 | |
| 219 | V | A | 0.3920 | |
| 220 | K | A | -0.6659 | |
| 221 | V | A | 0.5665 | |
| 222 | N | A | -1.1490 | |
| 223 | I | A | -1.2417 | |
| 224 | R | A | -2.0764 | |
| 225 | G | A | -1.3499 | |
| 226 | P | A | -1.1711 | |
| 227 | G | A | -1.1676 | |
| 228 | P | A | -1.2844 | |
| 229 | G | A | -1.0723 | |
| 230 | S | A | -1.1719 | |
| 231 | D | A | -1.3012 | |
| 232 | A | A | -0.1497 | |
| 233 | C | A | 0.0000 | |
| 234 | L | A | 1.1190 | |
| 235 | G | A | 0.7588 | |
| 236 | L | A | 0.0000 | |
| 237 | L | A | 0.7862 | |
| 238 | A | A | 0.9802 | |
| 239 | V | A | 1.0367 | |
| 240 | A | A | 0.0000 | |
| 241 | A | A | 0.2433 | |
| 242 | V | A | 0.2768 | |
| 243 | A | A | 0.1926 | |
| 244 | A | A | -0.1823 | |
| 245 | G | A | -0.3671 | |
| 246 | P | A | -0.5609 | |
| 247 | G | A | -0.9065 | |
| 248 | P | A | -1.1471 | |
| 249 | G | A | -1.4117 | |
| 250 | V | A | -1.0279 | |
| 251 | Y | A | -1.0947 | |
| 252 | R | A | -3.0392 | |
| 253 | E | A | -2.7216 | |
| 254 | Y | A | -0.7194 | |
| 255 | T | A | 0.0000 | |
| 256 | D | A | -2.7998 | |
| 257 | A | A | -1.7984 | |
| 258 | S | A | -1.6115 | |
| 259 | F | A | -2.1472 | |
| 260 | A | A | -2.2971 | |
| 261 | N | A | -3.2022 | |
| 262 | R | A | -3.2955 | |
| 263 | K | A | -3.4486 | |
| 264 | E | A | -3.5998 | |
| 265 | G | A | -2.6685 | |
| 266 | P | A | -1.9723 | |
| 267 | G | A | -1.2215 | |
| 268 | P | A | -0.5163 | |
| 269 | G | A | -0.5947 | |
| 270 | Y | A | -0.2310 | |
| 271 | T | A | -0.6365 | |
| 272 | D | A | -1.6703 | |
| 273 | A | A | -1.2024 | |
| 274 | S | A | -1.4316 | |
| 275 | F | A | -1.6207 | |
| 276 | A | A | -2.0851 | |
| 277 | N | A | -2.9307 | |
| 278 | R | A | -3.6797 | |
| 279 | K | A | -3.6570 | |
| 280 | E | A | -3.9322 | |
| 281 | R | A | -4.3726 | |
| 282 | G | A | -3.5912 | |
| 283 | P | A | -2.8492 | |
| 284 | E | A | -2.5530 | |
| 285 | E | A | -2.4687 | |
| 286 | E | A | -1.7152 | |
| 287 | I | A | 0.1496 | |
| 288 | F | A | 0.8921 | |
| 289 | M | A | 1.3606 | |
| 290 | Y | A | 1.9770 | |
| 291 | L | A | 1.9311 | |
| 292 | L | A | 2.3535 | |
| 293 | T | A | 2.0451 | |
| 294 | V | A | 1.9877 | |
| 295 | F | A | 2.0357 | |
| 296 | L | A | 2.6401 | |
| 297 | I | A | 2.4508 | |
| 298 | T | A | 1.4642 | |
| 299 | Q | A | 0.9462 | |
| 300 | M | A | 2.2273 | |
| 301 | I | A | 2.5122 | |
| 302 | G | A | 1.7388 | |
| 303 | S | A | 1.7642 | |
| 304 | A | A | 2.2659 | |
| 305 | L | A | 3.3694 | |
| 306 | F | A | 3.4604 | |
| 307 | A | A | 2.4465 | |
| 308 | V | A | 2.8957 |