Project name: cbd643ede1851ea

Status: done

Started: 2026-07-23 19:51:01
Settings
Chain sequence(s) A: MDAMKRGLCCVLLLCGAVFVSPEAAAKAKFVAAWTLKAAAAAYYVKVNIRDIAAYLYIEDLLSRAAYAVYNPALGYAAYGQDWRVKSAAAYSSQESLSDLAAYDACLGLLAVAAYYTDASFANRGPGPGRTGQDWRVKSAFKCSGPGPGSQESLSDLGAIESLRGPGPGLLLLYIEDLLSRCSSGPGPGLLNYAVYNPALGYSQGPGPGRIKILCATYVKVNIRGPGPGSDACLGLLAVAAVAAGPGPGVYREYTDASFANRKEGPGPGYTDASFANRKERGPEEEIFMYLLTVFLITQMIGSALFAV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:33)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:35)
Show buried residues

Minimal score value
-4.3726
Maximal score value
3.7619
Average score
0.0288
Total score value
8.8649

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A -0.2903
2 D A -2.0359
3 A A -1.1691
4 M A -0.6406
5 K A -1.8551
6 R A -1.8007
7 G A -0.0841
8 L A 1.5182
9 C A 1.8748
10 C A 2.2984
11 V A 3.2401
12 L A 3.7619
13 L A 3.6389
14 L A 2.9643
15 C A 3.0244
16 G A 2.6697
17 A A 1.9409
18 V A 2.7113
19 F A 3.2756
20 V A 2.4721
21 S A 0.5301
22 P A -0.5330
23 E A -2.1386
24 A A -0.7645
25 A A -0.0364
26 A A -0.9742
27 K A -1.6838
28 A A -0.1763
29 K A -0.2862
30 F A 1.4232
31 V A 1.3842
32 A A 1.0300
33 A A 1.0757
34 W A 1.7113
35 T A 1.1651
36 L A 1.4188
37 K A -0.2534
38 A A 0.4072
39 A A 0.9924
40 A A 0.9698
41 A A 1.1311
42 A A 1.3010
43 Y A 2.1752
44 Y A 2.4608
45 V A 2.1905
46 K A 0.6452
47 V A 0.8293
48 N A 0.3455
49 I A 1.4706
50 R A -0.5468
51 D A 0.0635
52 I A 2.1969
53 A A 1.6689
54 A A 1.4574
55 Y A 2.6137
56 L A 2.6228
57 Y A 2.5901
58 I A 2.0817
59 E A -0.1356
60 D A -0.4773
61 L A 0.5917
62 L A 0.8829
63 S A -0.5832
64 R A -1.1728
65 A A 0.1811
66 A A 0.8941
67 Y A 1.0840
68 A A 0.9295
69 V A 1.9985
70 Y A 1.7986
71 N A 1.2618
72 P A 0.9077
73 A A 0.8433
74 L A 1.9619
75 G A 1.4686
76 Y A 2.2591
77 A A 0.0000
78 A A 0.7774
79 Y A 1.5155
80 G A 0.4891
81 Q A -0.2755
82 D A -0.3765
83 W A -0.0106
84 R A -1.2205
85 V A 0.0224
86 K A -1.1436
87 S A -0.5520
88 A A 0.0053
89 A A -0.1474
90 A A -0.3910
91 Y A 0.1132
92 S A -0.4603
93 S A -0.6169
94 Q A -1.3586
95 E A -2.0379
96 S A -0.8818
97 L A 0.4832
98 S A -0.8486
99 D A -1.4131
100 L A 0.4489
101 A A 0.0602
102 A A 0.0146
103 Y A 0.4004
104 D A -0.8963
105 A A 0.0458
106 C A 0.7280
107 L A 0.2254
108 G A 0.5802
109 L A 1.9667
110 L A 1.3779
111 A A 0.0000
112 V A 2.2791
113 A A 1.8485
114 A A 1.3960
115 Y A 2.3342
116 Y A 2.2193
117 T A 1.0532
118 D A 0.4230
119 A A 0.1784
120 S A -0.2485
121 F A -0.4269
122 A A -1.0803
123 N A -2.0567
124 R A -2.3609
125 G A -1.5761
126 P A -1.2762
127 G A -1.0532
128 P A -0.9932
129 G A -1.2355
130 R A -1.1627
131 T A -0.8928
132 G A -0.9790
133 Q A -1.0292
134 D A -1.0257
135 W A -0.0041
136 R A -0.5953
137 V A -0.5859
138 K A -0.9315
139 S A -0.6690
140 A A -0.5825
141 F A -0.1525
142 K A -1.3546
143 C A -0.3104
144 S A -0.7888
145 G A -1.1674
146 P A -0.9300
147 G A -0.6346
148 P A -0.5798
149 G A 0.0000
150 S A 0.0000
151 Q A -1.8419
152 E A -2.7899
153 S A -1.7069
154 L A -0.9867
155 S A -1.8776
156 D A -2.4130
157 L A -0.9093
158 G A -1.3244
159 A A -0.8104
160 I A -0.6845
161 E A -1.8173
162 S A -0.8845
163 L A 0.1408
164 R A -1.7921
165 G A -0.9810
166 P A -0.0600
167 G A -0.2830
168 P A 0.2213
169 G A 0.0557
170 L A 0.9574
171 L A 1.8360
172 L A 1.8169
173 L A 1.2687
174 Y A 2.1769
175 I A 1.6024
176 E A -0.2252
177 D A 0.0377
178 L A 0.6685
179 L A 0.8304
180 S A -0.4944
181 R A -1.4887
182 C A -0.5864
183 S A -0.5718
184 S A -0.9929
185 G A -1.0020
186 P A -0.8304
187 G A -0.8368
188 P A -0.3942
189 G A -0.3351
190 L A 0.6163
191 L A 0.9002
192 N A 1.0002
193 Y A 2.3044
194 A A 2.2713
195 V A 2.8213
196 Y A 2.3954
197 N A 1.5968
198 P A 1.2495
199 A A 1.0743
200 L A 2.1831
201 G A 1.8392
202 Y A 1.6512
203 S A -0.0245
204 Q A -1.1739
205 G A -0.9124
206 P A -0.8932
207 G A -1.3077
208 P A -0.9959
209 G A -1.1402
210 R A -0.9614
211 I A -0.0914
212 K A -0.7324
213 I A 1.1232
214 L A 0.9613
215 C A 0.5663
216 A A 0.4295
217 T A 0.4964
218 Y A 0.0000
219 V A 0.3920
220 K A -0.6659
221 V A 0.5665
222 N A -1.1490
223 I A -1.2417
224 R A -2.0764
225 G A -1.3499
226 P A -1.1711
227 G A -1.1676
228 P A -1.2844
229 G A -1.0723
230 S A -1.1719
231 D A -1.3012
232 A A -0.1497
233 C A 0.0000
234 L A 1.1190
235 G A 0.7588
236 L A 0.0000
237 L A 0.7862
238 A A 0.9802
239 V A 1.0367
240 A A 0.0000
241 A A 0.2433
242 V A 0.2768
243 A A 0.1926
244 A A -0.1823
245 G A -0.3671
246 P A -0.5609
247 G A -0.9065
248 P A -1.1471
249 G A -1.4117
250 V A -1.0279
251 Y A -1.0947
252 R A -3.0392
253 E A -2.7216
254 Y A -0.7194
255 T A 0.0000
256 D A -2.7998
257 A A -1.7984
258 S A -1.6115
259 F A -2.1472
260 A A -2.2971
261 N A -3.2022
262 R A -3.2955
263 K A -3.4486
264 E A -3.5998
265 G A -2.6685
266 P A -1.9723
267 G A -1.2215
268 P A -0.5163
269 G A -0.5947
270 Y A -0.2310
271 T A -0.6365
272 D A -1.6703
273 A A -1.2024
274 S A -1.4316
275 F A -1.6207
276 A A -2.0851
277 N A -2.9307
278 R A -3.6797
279 K A -3.6570
280 E A -3.9322
281 R A -4.3726
282 G A -3.5912
283 P A -2.8492
284 E A -2.5530
285 E A -2.4687
286 E A -1.7152
287 I A 0.1496
288 F A 0.8921
289 M A 1.3606
290 Y A 1.9770
291 L A 1.9311
292 L A 2.3535
293 T A 2.0451
294 V A 1.9877
295 F A 2.0357
296 L A 2.6401
297 I A 2.4508
298 T A 1.4642
299 Q A 0.9462
300 M A 2.2273
301 I A 2.5122
302 G A 1.7388
303 S A 1.7642
304 A A 2.2659
305 L A 3.3694
306 F A 3.4604
307 A A 2.4465
308 V A 2.8957
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Laboratory of Theory of Biopolymers 2018