| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPAVTVDLYYITYGETGWWYPSSYQEFAVPGSKSTATISGLKPGVDYTITVYAESGWGYDVSSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:28)
[INFO] Main: Simulation completed successfully. (00:00:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.6556 | |
| 2 | S | A | 0.3430 | |
| 3 | D | A | -0.1205 | |
| 4 | V | A | -0.1886 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.1866 | |
| 7 | D | A | -3.4313 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.1313 | |
| 10 | V | A | 0.1028 | |
| 11 | V | A | 1.5424 | |
| 12 | A | A | 0.8978 | |
| 13 | A | A | 0.3121 | |
| 14 | T | A | -0.5342 | |
| 15 | P | A | -1.1374 | |
| 16 | T | A | -1.0064 | |
| 17 | S | A | -0.5346 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7461 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.1410 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.2529 | |
| 24 | A | A | -1.7093 | |
| 25 | P | A | -0.5372 | |
| 26 | A | A | 0.2742 | |
| 27 | V | A | 0.3146 | |
| 28 | T | A | -0.4196 | |
| 29 | V | A | 0.0000 | |
| 30 | D | A | -1.7570 | |
| 31 | L | A | -0.4110 | |
| 32 | Y | A | 0.0000 | |
| 33 | Y | A | 0.2918 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.8835 | |
| 36 | Y | A | -0.8040 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -0.8643 | |
| 39 | T | A | -0.5143 | |
| 40 | G | A | 0.3582 | |
| 41 | W | A | 1.7322 | |
| 42 | W | A | 2.0911 | |
| 43 | Y | A | 2.0526 | |
| 44 | P | A | 0.7214 | |
| 45 | S | A | 0.0926 | |
| 46 | S | A | 0.1592 | |
| 47 | Y | A | -0.4789 | |
| 48 | Q | A | -1.8855 | |
| 49 | E | A | -1.9964 | |
| 50 | F | A | -0.4606 | |
| 51 | A | A | -0.0816 | |
| 52 | V | A | 0.0000 | |
| 53 | P | A | -0.9571 | |
| 54 | G | A | -1.2252 | |
| 55 | S | A | -1.3186 | |
| 56 | K | A | -2.1305 | |
| 57 | S | A | -1.4306 | |
| 58 | T | A | -0.7607 | |
| 59 | A | A | 0.0000 | |
| 60 | T | A | 0.2393 | |
| 61 | I | A | 0.0000 | |
| 62 | S | A | -0.6568 | |
| 63 | G | A | -1.0308 | |
| 64 | L | A | 0.0000 | |
| 65 | K | A | -2.3472 | |
| 66 | P | A | -1.6481 | |
| 67 | G | A | -1.4168 | |
| 68 | V | A | -1.3292 | |
| 69 | D | A | -1.9041 | |
| 70 | Y | A | 0.0000 | |
| 71 | T | A | -0.7313 | |
| 72 | I | A | 0.0000 | |
| 73 | T | A | -0.2990 | |
| 74 | V | A | 0.0000 | |
| 75 | Y | A | 0.3866 | |
| 76 | A | A | 0.0000 | |
| 77 | E | A | -0.0425 | |
| 78 | S | A | 0.0000 | |
| 79 | G | A | 0.0116 | |
| 80 | W | A | 0.7051 | |
| 81 | G | A | 0.3433 | |
| 82 | Y | A | 0.9583 | |
| 83 | D | A | -0.5411 | |
| 84 | V | A | 1.0078 | |
| 85 | S | A | 0.0000 | |
| 86 | S | A | -0.1073 | |
| 87 | P | A | -0.0300 | |
| 88 | I | A | -0.4195 | |
| 89 | S | A | -0.4556 | |
| 90 | I | A | -0.7511 | |
| 91 | N | A | -1.6732 | |
| 92 | Y | A | -1.3825 | |
| 93 | R | A | -2.4587 | |
| 94 | T | A | -1.4840 |