Project name: cc2e0a8cf4d1831

Status: done

Started: 2024-06-21 06:23:24
Settings
Chain sequence(s) A: MSEHVNKYTEYEARTKAIETLLYERGLITPAAVDRVVSYYENEIGPMGGAKVVAKSWVDPEYRKWLEEDATAAMASLGYAGEQAHQISAVFNDSQTHHVVVCTLCSCYPWPVLGLPPAWYKSMEYRSRVVADPRGVLKRDFGFDIPDEVEVRVWDSSSEIRYIVIPERPAGTDLWSEEELTKLVSRDSMIGVSNALTPQEVIV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:21)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:22)
Show buried residues

Minimal score value
-3.8924
Maximal score value
2.2543
Average score
-0.8402
Total score value
-170.5508

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.2715
2 S A -0.6522
3 E A -1.8142
4 H A -1.6015
5 V A -0.2188
6 N A -1.5172
7 K A -1.7708
8 Y A -0.8491
9 T A -1.1438
10 E A -2.0648
11 Y A -0.6841
12 E A -1.6608
13 A A -1.7407
14 R A -2.1625
15 T A -1.4461
16 K A -1.6043
17 A A -0.3020
18 I A 0.7467
19 E A 0.2759
20 T A 0.0499
21 L A 0.8030
22 L A 0.8121
23 Y A 0.7052
24 E A -1.3995
25 R A -1.6140
26 G A -0.3885
27 L A 1.2068
28 I A 1.1794
29 T A 0.0319
30 P A -0.5732
31 A A -0.5504
32 A A 0.0920
33 V A -0.0284
34 D A -1.4539
35 R A -1.4263
36 V A 0.6194
37 V A 0.0812
38 S A -1.2402
39 Y A -0.8441
40 Y A -0.4982
41 E A -2.1381
42 N A -2.4701
43 E A -2.2063
44 I A -0.9115
45 G A -0.4884
46 P A 0.0666
47 M A 0.0482
48 G A 0.0000
49 G A 0.0000
50 A A 0.0000
51 K A -1.7625
52 V A 0.0000
53 V A 0.0000
54 A A 0.0000
55 K A -1.8145
56 S A 0.0000
57 W A 0.0000
58 V A -0.6436
59 D A -1.4393
60 P A -1.7432
61 E A -2.8016
62 Y A 0.0000
63 R A -2.7361
64 K A -3.6452
65 W A -2.4627
66 L A 0.0000
67 E A -3.6729
68 E A -3.4646
69 D A -2.6163
70 A A 0.0000
71 T A -1.2337
72 A A -0.5404
73 A A 0.0000
74 M A 0.0000
75 A A -0.0747
76 S A 0.0376
77 L A 0.2975
78 G A -0.1097
79 Y A -0.0248
80 A A -0.8114
81 G A -1.5941
82 E A -2.5554
83 Q A -1.8167
84 A A 0.0000
85 H A -2.3771
86 Q A -2.2210
87 I A 0.0000
88 S A -0.8885
89 A A -0.8422
90 V A 0.0000
91 F A -0.9057
92 N A -1.9296
93 D A -2.8341
94 S A -2.2909
95 Q A -2.6489
96 T A -2.3299
97 H A 0.0000
98 H A 0.0000
99 V A 0.0000
100 V A 0.0000
101 V A 0.0000
102 C A 0.0000
103 T A 0.6469
104 L A 1.5848
105 C A 1.0913
106 S A 0.3104
107 C A 0.0269
108 Y A 0.0000
109 P A 0.0000
110 W A 0.1673
111 P A 0.0000
112 V A 0.0000
113 L A 0.0000
114 G A 0.0000
115 L A 0.6631
116 P A 0.0000
117 P A 0.0000
118 A A 0.0303
119 W A -0.1346
120 Y A 0.0000
121 K A -0.4502
122 S A -0.4201
123 M A -0.0205
124 E A -1.7462
125 Y A 0.0000
126 R A -0.4471
127 S A -0.7458
128 R A -1.5540
129 V A 0.0000
130 V A 0.1266
131 A A -0.5581
132 D A -1.7919
133 P A -1.2203
134 R A -2.4097
135 G A -2.4903
136 V A 0.0000
137 L A 0.0000
138 K A -3.3251
139 R A -3.5933
140 D A -2.8700
141 F A -1.5114
142 G A -2.0161
143 F A -2.0339
144 D A -2.7551
145 I A -1.9963
146 P A -2.3356
147 D A -3.2416
148 E A -3.3104
149 V A -2.9783
150 E A -3.2489
151 V A -1.9719
152 R A -1.5795
153 V A -0.2482
154 W A -0.1554
155 D A -0.3099
156 S A 0.0000
157 S A -0.3857
158 S A -1.0928
159 E A -2.3288
160 I A -1.1006
161 R A 0.0000
162 Y A 0.0541
163 I A 0.0000
164 V A 0.0000
165 I A 0.0000
166 P A 0.0000
167 E A -2.7093
168 R A -1.7928
169 P A -1.1301
170 A A -0.8189
171 G A -0.7373
172 T A 0.0000
173 D A -1.0728
174 L A 0.3958
175 W A -0.6259
176 S A -1.7041
177 E A -3.3309
178 E A -3.8924
179 E A -2.9254
180 L A 0.0000
181 T A 0.0000
182 K A -2.5855
183 L A 0.0000
184 V A 0.0000
185 S A -0.8295
186 R A -0.8428
187 D A -0.9442
188 S A 0.0000
189 M A 0.0000
190 I A 0.0000
191 G A 0.0000
192 V A 0.0000
193 S A -1.0211
194 N A -1.6366
195 A A 0.0000
196 L A -0.8312
197 T A -0.9535
198 P A -0.7347
199 Q A -0.9656
200 E A -1.1129
201 V A 0.4062
202 I A 2.2367
203 V A 2.2543
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Laboratory of Theory of Biopolymers 2018